MGE detailed information
MGE type: Prophage MGE length: 52854 bp
Accession: NZ_CP010443 Location: 2123618..2176471 Organism: Escherichia coli K-12 strain K-12 MG1655 Replicon: chromosome
Accession: NZ_CP010443 Location: 2123618..2176471 Organism: Escherichia coli K-12 strain K-12 MG1655 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SH04_RS10480 () | 2118831..2119619 | + | 789 | WP_000690229.1 | sugar phosphate isomerase/epimerase | - |
| SH04_RS10485 () | 2119629..2120684 | + | 1056 | WP_001395397.1 | Gfo/Idh/MocA family oxidoreductase | - |
| SH04_RS10490 () | 2120681..2122948 | + | 2268 | WP_000198036.1 | kojibiose phosphorylase | - |
| SH04_RS10495 () | 2122945..2123604 | + | 660 | WP_000775794.1 | beta-phosphoglucomutase | - |
| SH04_RS10500 () | 2123618..2124699 | + | 1082 | Protein_1966 | hypothetical protein | VF |
| SH04_RS10505 () | 2124744..2125649 | + | 906 | WP_000735257.1 | monomeric porin OmpG | - |
| SH04_RS10510 () | 2125760..2126758 | - | 999 | WP_000075375.1 | LacI family transcriptional regulator | - |
| SH04_RS10515 () | 2126914..2128311 | + | 1398 | WP_000825775.1 | YcjX family protein | - |
| SH04_RS10520 () | 2128308..2129369 | + | 1062 | WP_000138728.1 | YcjF family protein | - |
| SH04_RS10525 () | 2129517..2131058 | + | 1542 | WP_001300658.1 | hypothetical protein | VF |
| SH04_RS10530 () | 2131102..2131608 | - | 507 | WP_000084387.1 | thiol peroxidase | - |
| SH04_RS10535 () | 2131727..2132692 | + | 966 | WP_001261211.1 | L-Ala-D/L-Glu epimerase | - |
| SH04_RS10540 () | 2132667..2133395 | - | 729 | WP_000219122.1 | murein tripeptide amidase MpaA | - |
| SH04_RS10545 () | 2133522..2133659 | - | 138 | Protein_1975 | NAD-dependent dehydratase | - |
| SH04_RS10550 () | 2133730..2134650 | - | 921 | WP_001300523.1 | alpha/beta hydrolase | - |
| SH04_RS10555 () | 2134788..2135687 | + | 900 | WP_000817708.1 | hypothetical protein | VF |
| SH04_RS10565 () | 2136024..2137637 | + | 1614 | WP_000683020.1 | murein tripeptide ABC transporter substrate-binding protein MppA | - |
| SH04_RS10570 () | 2137688..2138719 | - | 1032 | WP_000559900.1 | low conductance mechanosensitive channel YnaI | - |
| SH04_RS10575 () | 2138873..2139889 | + | 1017 | WP_010723085.1 | IS5 family transposase IS5D | Transposase |
| SH04_RS10580 () | 2140162..2140419 | + | 258 | WP_000605090.1 | DUF2534 family protein | - |
| SH04_RS10585 () | 2140469..2141419 | - | 951 | WP_001262123.1 | universal stress protein UspE | - |
| SH04_RS10590 () | 2141571..2142323 | - | 753 | WP_000611911.1 | fumarate/nitrate reduction transcriptional regulator Fnr | - |
| SH04_RS10595 () | 2142518..2143033 | - | 516 | WP_000945011.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| SH04_RS10600 () | 2143044..2144570 | - | 1527 | WP_000062973.1 | p-aminobenzoyl-glutamate transporter | - |
| SH04_RS10610 () | 2144607..2146052 | - | 1446 | WP_001156451.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| SH04_RS10615 () | 2146052..2147362 | - | 1311 | WP_000444929.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| SH04_RS10620 () | 2147538..2148446 | + | 909 | WP_000885458.1 | LysR family transcriptional regulator | - |
| SH04_RS10630 () | 2148776..2149339 | + | 564 | WP_001046829.1 | DNA endonuclease SmrA | - |
| SH04_RS10635 () | 2149360..2150592 | - | 1233 | WP_000628058.1 | diguanylate cyclase DgcM | - |
| SH04_RS10640 () | 2150847..2151830 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| SH04_RS10650 () | 2152308..2153681 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| SH04_RS10655 () | 2153810..2154745 | - | 936 | WP_001157406.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| SH04_RS23895 () | 2154797..2156032 | - | 1236 | WP_000040852.1 | hypothetical protein ; Integrase | Integrase |
| SH04_RS10665 () | 2156034..2156249 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| SH04_RS10670 () | 2156328..2156537 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 2156353..2156531 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2156353..2156531 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2156353..2156531 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2156353..2156531 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| SH04_RS10675 () | 2156530..2156724 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| SH04_RS10680 () | 2156781..2157590 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| SH04_RS10685 () | 2157583..2160183 | - | 2601 | WP_000105143.1 | exodeoxyribonuclease VIII | - |
| SH04_RS10690 () | 2160285..2160560 | - | 276 | WP_000632297.1 | protein RacC | - |
| SH04_RS10695 () | 2160635..2160805 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| SH04_RS10700 () | 2160805..2161026 | - | 222 | WP_000560225.1 | killing protein KilR | - |
| SH04_RS10705 () | 2161468..2161956 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| SH04_RS22865 () | 2161953..2162108 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| SH04_RS10710 () | 2162562..2163038 | - | 477 | WP_000948459.1 | DNA-binding transcriptional repressor RacR | - |
| SH04_RS10715 () | 2163162..2163458 | + | 297 | WP_000712069.1 | toxin YdaS | - |
| SH04_RS10720 () | 2163481..2163903 | + | 423 | WP_000693797.1 | phage protein | - |
| SH04_RS10725 () | 2163916..2164773 | + | 858 | WP_000899748.1 | DUF1376 domain-containing protein | - |
| SH04_RS10730 () | 2164780..2165526 | + | 747 | WP_000788970.1 | ATP-binding protein | - |
| SH04_RS10735 () | 2165549..2166001 | + | 453 | Protein_2010 | DUF1627 domain-containing protein | - |
| SH04_RS25020 () | 2166197..2166382 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| SH04_RS10745 () | 2166579..2168036 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| SH04_RS10750 () | 2168174..2168437 | + | 264 | WP_001350510.1 | ParB/Srx family N-terminal domain-containing protein | - |
| SH04_RS10755 () | 2168418..2168777 | + | 360 | WP_000091628.1 | hypothetical protein | - |
| SH04_RS10765 () | 2169251..2170183 | + | 933 | Protein_2015 | phage tail length tape measure family protein | - |
| SH04_RS10770 () | 2170186..2170401 | + | 216 | Protein_2016 | Ail/Lom family outer membrane beta-barrel protein | - |
| SH04_RS10775 () | 2170543..2171523 | - | 981 | WP_000019448.1 | IS5 family transposase ISKpn26 | Transposase |
| SH04_RS25025 () | 2171593..2171781 | + | 189 | Protein_2018 | Ail/Lom family outer membrane beta-barrel protein | - |
| SH04_RS23920 () | 2171846..2175208 | + | 3363 | WP_000279097.1 | prophage tail fiber N-terminal domain-containing protein | - |
| SH04_RS10800 () | 2175208..2175783 | + | 576 | WP_001698950.1 | tail fiber assembly protein | - |
| SH04_RS10805 () | 2175881..2176471 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| SH04_RS10810 () | 2176788..2177021 | - | 234 | WP_000836770.1 | cold shock protein YdfK | - |
| SH04_RS25525 () | 2177090..2177203 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| SH04_RS10815 () | 2177982..2178416 | - | 435 | WP_001300461.1 | universal stress protein UspF | - |
| SH04_RS10820 () | 2178557..2179690 | - | 1134 | WP_000837921.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|