MGE detailed information
MGE type: Genomic_island MGE length: 19992 bp
Accession: NZ_CP010411 Location: 2146647..2166638 Organism: Bifidobacterium longum subsp. infantis strain BT1 Replicon: chromosome
Accession: NZ_CP010411 Location: 2146647..2166638 Organism: Bifidobacterium longum subsp. infantis strain BT1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RY67_RS09130 () | 2141969..2143369 | + | 1401 | WP_060621057.1 | amino acid permease | - |
| RY67_RS09135 () | 2143732..2144396 | + | 665 | Protein_1798 | MFS transporter | - |
| RY67_RS09140 () | 2144420..2145433 | - | 1014 | WP_060621059.1 | VanZ family protein | - |
| RY67_RS09145 () | 2145580..2146239 | + | 660 | WP_060621060.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| RY67_RS11800 () | 2146307..2146606 | + | 300 | WP_082248200.1 | DUF2316 family protein | - |
| RY67_RS09155 () | 2146647..2147180 | - | 534 | WP_025301224.1 | GNAT family N-acetyltransferase | - |
| RY67_RS09160 () | 2147268..2147681 | - | 414 | WP_158082797.1 | IS5 family transposase ISCARN85 | Transposase |
| RY67_RS12730 () | 2147565..2147816 | - | 252 | Protein_1804 | transposase | - |
| RY67_RS09165 () | 2148188..2149939 | + | 1752 | WP_012577721.1 | sodium:solute symporter family protein | - |
| RY67_RS09170 () | 2149973..2150314 | + | 342 | WP_012577722.1 | hypothetical protein | - |
| RY67_RS12300 () | 2150653..2150997 | + | 345 | WP_158082798.1 | IS5 family transposase ISCARN85 | Transposase |
| RY67_RS09180 () | 2150996..2151199 | + | 204 | Protein_1808 | efflux RND transporter periplasmic adaptor subunit | - |
| RY67_RS12735 () | 2151196..2151318 | + | 123 | Protein_1809 | ABC transporter ATP-binding protein | - |
| RY67_RS12305 () | 2151313..2151478 | + | 166 | Protein_1810 | ABC transporter permease | - |
| RY67_RS09190 () | 2151715..2151984 | + | 270 | WP_038425943.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| RY67_RS09195 () | 2151988..2152281 | + | 294 | WP_029680114.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| RY67_RS11805 () | 2152338..2152621 | + | 284 | Protein_1813 | hypothetical protein | - |
| RY67_RS09205 () | 2152824..2153409 | - | 586 | Protein_1814 | cell filamentation protein Fic | - |
| RY67_RS09210 () | 2153406..2153585 | - | 180 | WP_060621639.1 | antitoxin VbhA family protein | - |
| RY67_RS09215 () | 2153799..2154440 | + | 642 | WP_060621067.1 | hypothetical protein | - |
| RY67_RS09220 () | 2154580..2154873 | + | 294 | WP_012471870.1 | hypothetical protein | - |
| RY67_RS09225 () | 2154897..2155358 | + | 462 | WP_019727563.1 | HipA N-terminal domain-containing protein | - |
| RY67_RS12620 () | 2155522..2155773 | - | 252 | WP_082248201.1 | hypothetical protein | - |
| RY67_RS12315 () | 2156104..2156442 | + | 339 | Protein_1820 | MFS transporter | - |
| RY67_RS09240 () | 2156766..2158343 | + | 1578 | WP_060621068.1 | amino acid permease | - |
| RY67_RS09245 () | 2158585..2158824 | - | 240 | WP_003829454.1 | hypothetical protein | - |
| RY67_RS09250 () | 2159122..2159475 | + | 354 | WP_014483707.1 | DUF488 domain-containing protein | - |
| RY67_RS12625 () | 2159541..2159969 | - | 429 | WP_003831803.1 | hypothetical protein | - |
| RY67_RS09260 () | 2160167..2161243 | + | 1077 | WP_174510703.1 | hypothetical protein | - |
| RY67_RS09265 () | 2161227..2161553 | - | 327 | WP_129558987.1 | hypothetical protein | - |
| RY67_RS09270 () | 2161604..2162005 | - | 402 | WP_060621071.1 | hypothetical protein | - |
| RY67_RS11810 () | 2162059..2162957 | + | 899 | Protein_1828 | virulence protein RhuM/Fic/DOC family protein | - |
| RY67_RS09280 () | 2163042..2163362 | + | 321 | WP_060621672.1 | hypothetical protein | - |
| RY67_RS09285 () | 2163466..2163807 | + | 342 | WP_060621674.1 | DUF488 domain-containing protein | - |
| RY67_RS09290 () | 2163816..2164610 | - | 795 | WP_060621073.1 | RNA helicase | - |
| RY67_RS09295 () | 2165448..2166638 | + | 1191 | WP_060621075.1 | pyridoxal phosphate-dependent aminotransferase | - |
| RY67_RS09300 () | 2166678..2168441 | + | 1764 | WP_060621077.1 | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | - |
| RY67_RS09305 () | 2168600..2169229 | + | 630 | WP_060621078.1 | HAD family phosphatase | - |
| RY67_RS09310 () | 2169484..2169831 | - | 348 | WP_129558988.1 | ABC transporter ATP-binding protein | - |
| RY67_RS09315 () | 2169998..2170921 | + | 924 | WP_060621082.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|