MGE detailed information

MGE type: Conjugative plasmid        MGE length: 193908 bp
Accession: NZ_CP010373        Location: 1..193908         Organism: Escherichia coli strain 6409       Replicon: plasmid p6409-202.186kb


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
RR31_RS27750 () 4..969 - 966 Protein_0 IS30 family transposase ISAba125 Transposase
RR31_RS24515 () 1319..1603 + 285 WP_015056391.1 hypothetical protein -
RR31_RS24520 () 1814..3295 - 1482 WP_032723056.1 60 kDa chaperonin VF
RR31_RS24525 () 3531..5169 - 1639 Protein_3 60 kDa chaperonin VF
RR31_RS24530 () 5225..5515 - 291 WP_004201172.1 co-chaperone GroES -
RR31_RS24535 () 5709..6038 + 330 WP_004201171.1 divalent-cation tolerance protein CutA -
RR31_RS24540 () 6043..7074 + 1032 WP_004201169.1 protein-disulfide reductase DsbD N-terminal domain-containing protein -
RR31_RS24545 () 7085..7723 - 639 WP_004201168.1 phosphoribosylanthranilate isomerase -
RR31_RS24550 () 7728..8093 - 366 WP_004201167.1 bleomycin binding protein Ble-MBL -
RR31_RS24555 () 8097..8891 - 795 WP_040110383.1 Metallo-beta-lactamase type 2 ARG
RR31_RS24560 () 8931..11816 - 2886 WP_001138082.1 Tn3 family transposase TnpA_ISRsp12 Transposase
RR31_RS24570 () 11937..13129 + 1193 WP_085955245.1 IS3 family transposase ISKpn18 Transposase
RR31_RS24575 () 13248..13862 + 615 WP_000904906.1 Tn3 family transposase TnpR_ISMex22 Transposase
RR31_RS24580 () 13928..14731 + 804 WP_001082319.1 Aminoglycoside 3'-phosphotransferase ARG
RR31_RS24585 () 14731..15567 + 837 WP_040110386.1 hypothetical protein ARG
RR31_RS24590 () 15907..16611 + 705 WP_001067784.1 IS6 family transposase IS1006 Transposase
RR31_RS24595 () 16896..17468 + 573 WP_000960976.1 Bifunctional AAC/APH ARG
RR31_RS24600 () 17420..17617 - 198 Protein_17 hypothetical protein -
RR31_RS24605 () 18125..19084 + 960 Protein_18 IS91 family transposase ISPps1 Transposase
RR31_RS24610 () 19148..19852 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
RR31_RS24615 () 19895..20380 + 486 Protein_20 IS91 family transposase ISVsa3 Transposase
RR31_RS24620 () 20828..21127 - 300 WP_011872911.1 hypothetical protein -
RR31_RS24625 () 21422..21694 - 273 WP_000787563.1 MafI family immunity protein -
RR31_RS24630 () 21691..25845 - 4155 WP_014342219.1 Putative deoxyribonuclease RhsC VF
RR31_RS24635 () 26086..26811 - 726 WP_000988732.1 hypothetical protein -
RR31_RS24640 () 26925..27299 - 375 WP_000868821.1 hypothetical protein -
RR31_RS29280 () 27420..27536 - 117 WP_000338626.1 hypothetical protein -
RR31_RS24645 () 27546..27785 - 240 WP_000714162.1 permease -
RR31_RS24650 () 27858..28136 - 279 WP_000268337.1 hypothetical protein -
RR31_RS24655 () 28123..29850 - 1728 WP_040110392.1 toprim domain-containing protein -
RR31_RS24660 () 30028..30414 - 387 WP_001077335.1 hypothetical protein -
RR31_RS24665 () 30872..31723 - 852 WP_000595210.1 hypothetical protein -
RR31_RS24670 () 31798..32355 - 558 WP_000064432.1 hypothetical protein -
RR31_RS24675 () 32429..32647 - 219 WP_000260293.1 hypothetical protein -
RR31_RS24680 () 32661..32930 - 270 WP_000184110.1 hypothetical protein -
RR31_RS24685 () 32923..33528 - 606 WP_000071870.1 5'-deoxynucleotidase -
RR31_RS24690 () 33600..33803 - 204 WP_000050848.1 hypothetical protein -
RR31_RS24695 () 34005..36458 - 2454 WP_040110394.1 phosphoadenosine phosphosulfate reductase -
RR31_RS24700 () 36546..36932 - 387 WP_000042274.1 hypothetical protein -
RR31_RS24705 () 37165..37719 - 555 WP_001093868.1 hypothetical protein -
RR31_RS24710 () 37793..38224 - 432 WP_000687894.1 hypothetical protein -
RR31_RS24715 () 38285..39910 - 1626 WP_000201432.1 DNA cytosine methyltransferase -
RR31_RS24720 () 39988..40290 - 303 WP_000410925.1 hypothetical protein -
RR31_RS24725 () 40368..40712 - 345 WP_000209093.1 hypothetical protein -
RR31_RS24730 () 40904..41281 - 378 WP_001337696.1 hypothetical protein -
RR31_RS24735 () 41326..41517 - 192 WP_000651508.1 hypothetical protein -
RR31_RS29285 () 41535..41777 + 243 WP_002210529.1 hypothetical protein -
RR31_RS28510 () 41855..42307 - 453 WP_001176699.1 hypothetical protein -
RR31_RS24750 () 42297..42686 - 390 WP_000026577.1 hypothetical protein -
RR31_RS24755 () 42748..42972 - 225 WP_001102700.1 2Fe-2S ferredoxin-like protein -
RR31_RS24760 () 43038..43922 - 885 WP_000477209.1 hypothetical protein -
RR31_RS24765 () 43996..44496 - 501 WP_000793769.1 hypothetical protein -
RR31_RS24770 () 44587..45126 - 540 WP_000018872.1 hypothetical protein -
RR31_RS27770 () 45391..45726 - 336 WP_001071288.1 hypothetical protein -
RR31_RS24775 () 45788..47584 - 1797 WP_000039318.1 VWA domain-containing protein -
RR31_RS24780 () 47669..48946 - 1278 WP_000170086.1 DUF3150 domain-containing protein -
RR31_RS24785 () 49146..50156 - 1011 WP_000706865.1 YqaJ viral recombinase family protein -
RR31_RS24790 () 50219..51208 - 990 WP_001282585.1 phage recombination protein Bet -
RR31_RS24795 () 51303..51833 - 531 WP_000987165.1 single-stranded DNA-binding protein -
RR31_RS24800 () 51894..52802 - 909 WP_000739139.1 hypothetical protein -
RR31_RS24805 () 52813..53781 - 969 WP_000085162.1 CbbQ/NirQ/NorQ C-terminal domain-containing protein -
RR31_RS24810 () 54001..54186 - 186 WP_001186917.1 hypothetical protein -
RR31_RS24815 () 54490..54810 - 321 WP_000547566.1 hypothetical protein -
RR31_RS24820 () 55104..55745 + 642 WP_000796664.1 hypothetical protein -
RR31_RS24825 () 55868..56728 + 861 WP_000709517.1 hypothetical protein -
RR31_RS24830 () 56767..59577 - 2811 WP_077784978.1 conjugal transfer mating pair stabilization protein TraN -
RR31_RS24835 () 59681..60688 - 1008 WP_000983283.1 TraU family protein -
RR31_RS24840 () 60685..61356 - 672 WP_001337754.1 EAL domain-containing protein -
RR31_RS24845 () 61353..62618 - 1266 WP_000621288.1 conjugal transfer protein TraW -
RR31_RS24850 () 62581..63111 - 531 WP_001010738.1 S26 family signal peptidase -
RR31_RS24855 () 63108..63425 - 318 WP_000351984.1 hypothetical protein -
RR31_RS24860 () 63440..65887 - 2448 WP_000637386.1 type IV secretion system protein TraC -
RR31_RS24865 () 65884..66591 - 708 WP_001259347.1 DsbC family protein -
RR31_RS24870 () 66740..72271 - 5532 WP_000606833.1 DUF4165 domain-containing protein -
RR31_RS24875 () 72472..72864 - 393 WP_000479535.1 hypothetical protein -
RR31_RS24880 () 72868..73446 - 579 WP_000793435.1 type IV conjugative transfer system lipoprotein TraV -
RR31_RS24885 () 73443..74756 - 1314 WP_024131605.1 conjugal transfer protein TraB -
RR31_RS24890 () 74756..75673 - 918 WP_000794249.1 type-F conjugative transfer system secretin TraK -
RR31_RS24895 () 75657..76283 - 627 WP_001049716.1 hypothetical protein -
RR31_RS24900 () 76280..76561 - 282 WP_000805625.1 type IV conjugative transfer system protein TraL -
RR31_RS24905 () 76706..77083 - 378 WP_000509509.1 hypothetical protein -
RR31_RS24910 () 77401..78063 - 663 WP_001231463.1 hypothetical protein -
RR31_RS24915 () 78063..78440 - 378 WP_000869261.1 hypothetical protein -
RR31_RS24920 () 78450..78896 - 447 WP_000122506.1 hypothetical protein -
RR31_RS24925 () 78906..79535 - 630 WP_000743450.1 DUF4400 domain-containing protein -
RR31_RS24930 () 79492..80076 - 585 WP_000332866.1 hypothetical protein -
RR31_RS24935 () 80087..81952 - 1866 WP_000178856.1 conjugative transfer system coupling protein TraD -
RR31_RS25670 () 81949..84927 - 2979 WP_001337757.1 hypothetical protein Relaxase
RR31_RS24945 () 85095..85712 + 618 WP_001249396.1 hypothetical protein -
RR31_RS24950 () 85694..85927 + 234 WP_001191892.1 hypothetical protein -
RR31_RS24955 () 85927..88119 + 2193 WP_000366821.1 DNA topoisomerase 3 -
RR31_RS24960 () 88134..88622 + 489 WP_000468105.1 hypothetical protein -
RR31_RS24970 () 88960..90168 + 1209 WP_001352368.1 IS4 family transposase IS10R Transposase
RR31_RS27785 () 90184..90303 - 120 Protein_93 LysR family transcriptional regulator -
RR31_RS24975 () 90534..91739 - 1206 WP_000599533.1 sodium/glutamate symporter -
RR31_RS24980 () 92183..92503 + 321 WP_000562370.1 antibiotic biosynthesis monooxygenase -
RR31_RS24985 () 92496..92867 + 372 WP_040110405.1 amino acid-binding protein -
RR31_RS24990 () 92970..94178 + 1209 WP_001206290.1 IS4 family transposase IS10A Transposase
RR31_RS24995 () 94227..94913 + 687 WP_001284954.1 winged helix-turn-helix domain-containing protein -
RR31_RS25000 () 94891..95514 - 624 WP_000088605.1 Tetracycline repressor protein class B from transposon Tn10 VF
RR31_RS25005 () 95596..96801 + 1206 WP_001089068.1 Tetracycline resistance protein, class B ARG
RR31_RS25010 () 96914..97507 - 594 WP_000428546.1 tetracyline resistance-associated transcriptional repressor TetC -
RR31_RS25015 () 97640..98011 + 372 WP_035689358.1 Transposon Tn10 TetD protein VF
RR31_RS25020 () 98021..99229 - 1209 WP_001339197.1 IS4 family transposase IS10R Transposase
RR31_RS25035 () 99718..100335 - 618 WP_000464631.1 hypothetical protein -
RR31_RS25040 () 100429..100647 - 219 WP_000362482.1 hypothetical protein -
RR31_RS25045 () 100853..101509 - 657 WP_000268551.1 hypothetical protein -
RR31_RS25050 () 101509..102936 - 1428 WP_000936896.1 DNA cytosine methyltransferase -
RR31_RS25055 () 102940..103440 - 501 WP_000647189.1 hypothetical protein -
RR31_RS25060 () 103449..103760 - 312 WP_002210541.1 hypothetical protein -
RR31_RS25065 () 103766..104197 - 432 WP_005507681.1 hypothetical protein -
RR31_RS25070 () 104265..104939 - 675 WP_000344151.1 thymidylate kinase -
RR31_RS25075 () 104914..105195 - 282 WP_000044824.1 hypothetical protein -
RR31_RS25080 () 105188..105565 - 378 WP_001125905.1 hypothetical protein -
RR31_RS29290 () 105884..106027 + 144 WP_000939033.1 hypothetical protein -
RR31_RS25085 () 106119..106754 + 636 WP_000074431.1 N-6 DNA methylase -
RR31_RS25090 () 106807..107079 - 273 WP_000703827.1 helix-turn-helix domain-containing protein -
RR31_RS25095 () 107128..108309 - 1182 WP_001207227.1 ParB/RepB/Spo0J family partition protein -
RR31_RS25100 () 108313..109098 - 786 WP_001151304.1 Sporulation initiation inhibitor protein Soj VF
RR31_RS25105 () 109272..109583 - 312 WP_000338945.1 hypothetical protein -
RR31_RS25110 () 109890..110513 + 624 Protein_120 dihydropteroate synthase -
RR31_RS25115 () 110536..111405 + 870 WP_039110121.1 23S ribosomal RNA methyltransferase Erm -
RR31_RS25120 () 111738..113231 - 1494 WP_001120888.1 IS91 family transposase ISVsa3 Transposase
RR31_RS25125 () 113442..113666 - 225 WP_000743213.1 hypothetical protein -
RR31_RS25130 () 113663..114400 - 738 WP_001366550.1 Tn3 family transposase TnpR_TnEc1 Transposase
RR31_RS29295 () 114440..114511 + 72 Protein_125 EAL domain-containing protein -
RR31_RS25135 () 114651..115415 - 765 WP_001389365.1 IS6 family transposase IS6100 Transposase
RR31_RS29300 () 115533..115601 - 69 Protein_127 EAL domain-containing protein -
RR31_RS25140 () 115922..116422 - 501 WP_000376623.1 GNAT family N-acetyltransferase -
RR31_RS25145 () 116550..117389 - 840 WP_000259031.1 Dihydropteroate synthase ARG
RR31_RS25150 () 117383..117730 - 348 WP_000679427.1 Multidrug transporter EmrE ARG
RR31_RS25155 () 117847..118692 - 846 WP_040110410.1 Streptomycin 3''-adenylyltransferase ARG
RR31_RS25160 () 118785..119258 - 474 WP_000777555.1 Dihydrofolate reductase type 1 ARG
RR31_RS25170 () 119415..120428 + 1014 WP_000845048.1 IS91 family transposase ISAzo26 Transposase
RR31_RS25175 () 120719..121297 + 579 Protein_134 Tn3 family transposase TnpR_ISAzs17 Transposase
RR31_RS25180 () 121821..122825 - 1005 WP_000427620.1 IS110 family transposase IS4321 Transposase
RR31_RS25185 () 122904..125870 - 2967 WP_001138064.1 Tn3 family transposase TnpA_TnAs3 Transposase
RR31_RS25190 () 125873..126433 - 561 WP_000147567.1 Tn3 family transposase TnpR_TnAs3 Transposase
RR31_RS25195 () 126559..127548 - 990 WP_010792470.1 putative signaling protein VF
RR31_RS25200 () 127545..127781 - 237 WP_003090697.1 broad-spectrum mercury transporter MerE -
RR31_RS25205 () 127778..128143 - 366 WP_003090698.1 mercury resistance co-regulator MerD -
RR31_RS25210 () 128161..129846 - 1686 WP_003090700.1 mercury(II) reductase -
RR31_RS25215 () 129918..130193 - 276 WP_000732290.1 mercury resistance system periplasmic binding protein MerP -
RR31_RS25220 () 130209..130559 - 351 WP_001294666.1 mercuric transport protein MerT -
RR31_RS25225 () 130631..131065 + 435 WP_000414383.1 IS607 family transposase ISChh1 Transposase
RR31_RS25230 () 131165..132169 + 1005 WP_000427620.1 IS110 family transposase IS4321 Transposase
RR31_RS25235 () 132480..132857 + 378 WP_000656305.1 GNAT family N-acetyltransferase -
RR31_RS25240 () 133058..133717 - 660 WP_000412211.1 Chloramphenicol acetyltransferase ARG
RR31_RS25245 () 133996..134693 + 698 Protein_148 IS1 family transposase IS1R Transposase
RR31_RS25250 () 134723..135193 - 471 WP_001281821.1 hypothetical protein -
RR31_RS28535 () 135186..135557 - 372 WP_000516916.1 hypothetical protein -
RR31_RS28540 () 135568..135762 - 195 WP_000343597.1 hypothetical protein -
RR31_RS25270 () 136103..136651 - 549 WP_001061574.1 transcriptional regulator -
RR31_RS25275 () 136814..137164 + 351 WP_000270043.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
RR31_RS25280 () 137169..137471 + 303 WP_000124640.1 XRE family transcriptional regulator Antitoxin Detail
RR31_RS25285 () 137498..137791 - 294 WP_001239997.1 chromosome segregation protein ParM -
RR31_RS25290 () 137879..138151 - 273 WP_001043047.1 HU family DNA-binding protein -
RR31_RS25295 () 138209..138736 - 528 WP_040110415.1 thermonuclease family protein -
RR31_RS25300 () 138753..138941 - 189 WP_001270411.1 hypothetical protein -
RR31_RS25305 () 138967..139824 - 858 WP_001167032.1 hypothetical protein -
RR31_RS25310 () 139811..140041 - 231 WP_000972663.1 hypothetical protein -
RR31_RS25315 () 140041..140559 - 519 WP_000210756.1 nitrite reductase -
RR31_RS25320 () 140556..141002 - 447 WP_000919345.1 Fe3+-siderophore ABC transporter permease -
RR31_RS25325 () 141002..141361 - 360 WP_000422768.1 hypothetical protein -
RR31_RS25330 () 141418..141846 - 429 WP_000591074.1 hypothetical protein -
RR31_RS25335 () 141880..142740 - 861 WP_000139698.1 DsbA family protein -
RR31_RS25340 () 142756..143715 - 960 WP_000829616.1 S49 family peptidase -
RR31_RS25345 () 143715..144569 - 855 WP_000539392.1 hypothetical protein -
RR31_RS25350 () 144574..144867 - 294 WP_001370730.1 hypothetical protein -
RR31_RS25355 () 144878..145351 - 474 WP_000057877.1 hypothetical protein -
RR31_RS25360 () 145448..145969 - 522 WP_000805800.1 hypothetical protein -
RR31_RS25365 () 145972..146493 - 522 WP_000393785.1 hypothetical protein -
RR31_RS25370 () 146498..147106 - 609 WP_000849071.1 hypothetical protein -
RR31_RS25375 () 147375..148490 + 1116 WP_000946102.1 phosphoadenosine phosphosulfate reductase family protein -
RR31_RS25380 () 148508..148951 + 444 WP_040110419.1 hypothetical protein -
RR31_RS25390 () 149988..151088 - 1101 WP_000350011.1 plasmid replication protein -
RR31_RS25395 () 151073..151360 - 288 WP_000127321.1 hypothetical protein -
RR31_RS25400 () 151365..151904 - 540 WP_001447712.1 hypothetical protein -
RR31_RS25405 () 152403..153386 + 984 WP_000077458.1 ParM/StbA family protein -
RR31_RS25410 () 153403..153696 + 294 WP_000919078.1 hypothetical protein -
RR31_RS25415 () 153698..154117 + 420 WP_000651490.1 H-NS histone family protein -
RR31_RS25420 () 154177..154728 - 552 WP_001020646.1 hypothetical protein -
RR31_RS25425 () 154725..155333 - 609 WP_000891157.1 hypothetical protein -
RR31_RS25430 () 155344..155877 - 534 WP_000790610.1 transglycosylase SLT domain-containing protein -
RR31_RS25435 () 155877..156149 - 273 WP_000356489.1 helix-turn-helix domain-containing protein -
RR31_RS25440 () 156865..157227 + 363 WP_000683483.1 hypothetical protein -
RR31_RS25445 () 157265..160879 - 3615 WP_040110423.1 conjugal transfer protein TraG N-terminal domain-containing protein -
RR31_RS25450 () 160892..162325 - 1434 WP_000256129.1 conjugal transfer protein TraH -
RR31_RS25455 () 162327..163367 - 1041 WP_001326396.1 conjugal transfer protein TraF -
RR31_RS25460 () 163478..164989 - 1512 WP_000811656.1 ATP-dependent helicase -
RR31_RS25470 () 165276..166316 - 1041 WP_000101568.1 DNA-binding protein -
RR31_RS25475 () 166469..167344 - 876 WP_001097010.1 DNA replication terminus site-binding protein -
RR31_RS25480 () 167661..168152 - 492 WP_000139717.1 hypothetical protein -
RR31_RS25485 () 168149..169018 - 870 WP_040110426.1 3'-5' exonuclease -
RR31_RS25490 () 169023..170033 - 1011 WP_000543934.1 IS91 family transposase ISWz1 Transposase
RR31_RS25495 () 170036..170572 - 537 WP_000949433.1 hypothetical protein -
RR31_RS25505 () 170871..171152 - 282 WP_000575657.1 hypothetical protein -
RR31_RS25510 () 171414..172016 + 603 WP_000278322.1 hypothetical protein -
RR31_RS25515 () 172140..175067 - 2928 Protein_198 Tn3 family transposase TnpA_Tn3 Transposase
RR31_RS25525 () 175117..175821 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
RR31_RS25530 () 175888..176913 - 1026 WP_001988464.1 IS30 family transposase ISAba125 Transposase
RR31_RS25535 () 177206..177490 + 285 WP_015056391.1 hypothetical protein -
RR31_RS25540 () 177701..179230 - 1530 WP_015056392.1 IS91 family transposase ISVsa3 Transposase
RR31_RS25545 () 179419..181059 - 1641 WP_004201176.1 60 kDa chaperonin VF
RR31_RS25550 () 181115..181405 - 291 WP_004201172.1 co-chaperone GroES -
RR31_RS25555 () 181599..181928 + 330 WP_004201171.1 divalent-cation tolerance protein CutA -
RR31_RS25560 () 181933..182964 + 1032 WP_004201169.1 protein-disulfide reductase DsbD N-terminal domain-containing protein -
RR31_RS25565 () 182975..183613 - 639 WP_004201168.1 phosphoribosylanthranilate isomerase -
RR31_RS25570 () 183618..183983 - 366 WP_004201167.1 bleomycin binding protein Ble-MBL -
RR31_RS25575 () 183987..184799 - 813 WP_004201164.1 Metallo-beta-lactamase type 2 ARG
RR31_RS25580 () 184900..185925 - 1026 WP_001988464.1 IS30 family transposase ISAba125 Transposase
RR31_RS25585 () 186218..186502 + 285 WP_015056391.1 hypothetical protein -
RR31_RS25590 () 186713..188242 - 1530 WP_015056392.1 IS91 family transposase ISVsa3 Transposase
RR31_RS25595 () 188431..190071 - 1641 WP_004201176.1 60 kDa chaperonin VF
RR31_RS25600 () 190127..190417 - 291 WP_004201172.1 co-chaperone GroES -
RR31_RS25605 () 190611..190940 + 330 WP_004201171.1 divalent-cation tolerance protein CutA -
RR31_RS25610 () 190945..191976 + 1032 WP_004201169.1 protein-disulfide reductase DsbD N-terminal domain-containing protein -
RR31_RS25615 () 191987..192625 - 639 WP_004201168.1 phosphoribosylanthranilate isomerase -
RR31_RS25620 () 192630..192995 - 366 WP_004201167.1 bleomycin binding protein Ble-MBL -
RR31_RS25625 () 192999..193811 - 813 WP_004201164.1 Metallo-beta-lactamase type 2 ARG

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance