MGE detailed information
MGE type: Prophage MGE length: 52849 bp
Accession: NZ_CP010371 Location: 4303406..4356254 Organism: Escherichia coli strain 6409 Replicon: chromosome
Accession: NZ_CP010371 Location: 4303406..4356254 Organism: Escherichia coli strain 6409 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RR31_RS21130 () | 4299275..4299772 | + | 498 | WP_001326644.1 | chorismate lyase | - |
| RR31_RS21135 () | 4299785..4300657 | + | 873 | WP_000455227.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| RR31_RS21140 () | 4300812..4303235 | - | 2424 | WP_000017354.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| RR31_RS21145 () | 4303406..4303774 | + | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| RR31_RS21150 () | 4303884..4304492 | + | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| RR31_RS21155 () | 4304565..4305890 | + | 1326 | WP_039268516.1 | MATE family efflux transporter DinF | - |
| RR31_RS21160 () | 4306006..4306215 | + | 210 | WP_001030593.1 | CsbD family protein | - |
| RR31_RS21165 () | 4306257..4306772 | - | 516 | WP_001295691.1 | zinc uptake transcriptional repressor Zur | - |
| RR31_RS21175 () | 4307090..4308075 | + | 986 | Protein_3997 | DUF2713 domain-containing protein | - |
| RR31_RS27220 () | 4308438..4308560 | + | 123 | WP_001300034.1 | hypothetical protein | - |
| RR31_RS21180 () | 4308796..4309368 | + | 573 | WP_000458583.1 | SocA family protein | Antitoxin Detail |
| RR31_RS21185 () | 4309398..4309784 | + | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| RR31_RS29225 () | 4309824..4309997 | + | 174 | WP_000390072.1 | hypothetical protein | - |
| RR31_RS21190 () | 4310045..4310326 | - | 282 | WP_001093916.1 | pyocin activator PrtN family protein | - |
| RR31_RS21195 () | 4310363..4311115 | - | 753 | WP_187440354.1 | hypothetical protein | - |
| RR31_RS21200 () | 4311334..4312158 | - | 825 | WP_000081311.1 | DUF2303 family protein | - |
| RR31_RS21205 () | 4312224..4312586 | - | 363 | WP_000135680.1 | hypothetical protein | - |
| RR31_RS21210 () | 4313273..4313947 | - | 675 | WP_039268519.1 | LexA family transcriptional regulator | - |
| RR31_RS21215 () | 4314038..4314238 | + | 201 | WP_000649477.1 | helix-turn-helix domain-containing protein | - |
| RR31_RS21220 () | 4314282..4314833 | + | 552 | WP_039268521.1 | hypothetical protein | - |
| RR31_RS21225 () | 4314830..4315666 | + | 837 | WP_039268523.1 | ash family protein | - |
| RR31_RS21230 () | 4315659..4315895 | + | 237 | WP_039268524.1 | hypothetical protein | - |
| RR31_RS21235 () | 4315892..4316710 | + | 819 | WP_039268525.1 | helix-turn-helix domain-containing protein | - |
| RR31_RS21240 () | 4316707..4317201 | + | 495 | WP_001373594.1 | PerC family transcriptional regulator | - |
| RR31_RS21245 () | 4317201..4317527 | + | 327 | WP_021518589.1 | LexA repressor | - |
| RR31_RS21250 () | 4317524..4317913 | + | 390 | WP_000767113.1 | RusA family crossover junction endodeoxyribonuclease | - |
| RR31_RS21255 () | 4317933..4318742 | + | 810 | WP_001061444.1 | KilA-N domain-containing protein | - |
| RR31_RS21260 () | 4318750..4319739 | + | 990 | WP_001360050.1 | DUF968 domain-containing protein | - |
| RR31_RS21265 () | 4319753..4320505 | + | 753 | WP_039268527.1 | antitermination protein | - |
| RR31_RS21270 () | 4320786..4321211 | + | 426 | WP_000217632.1 | hypothetical protein | - |
| RR31_RS21275 () | 4321435..4321638 | + | 204 | WP_000917724.1 | hypothetical protein | - |
| RR31_RS21280 () | 4321789..4322841 | + | 1053 | WP_000799656.1 | site-specific DNA-methyltransferase | - |
| RR31_RS21285 () | 4322909..4323124 | + | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| RR31_RS21290 () | 4323124..4323621 | + | 498 | WP_001135250.1 | lysozyme RrrD | - |
| RR31_RS21295 () | 4323618..4324085 | + | 468 | WP_001341210.1 | lysis protein | - |
| RR31_RS21300 () | 4324073..4324225 | + | 153 | WP_001139675.1 | hypothetical protein | - |
| RR31_RS29230 () | 4324367..4324543 | - | 177 | WP_001205130.1 | hypothetical protein | - |
| RR31_RS21310 () | 4324899..4325438 | + | 540 | WP_077784971.1 | DUF1441 family protein | - |
| RR31_RS21315 () | 4325447..4327546 | + | 2100 | WP_044721808.1 | phage terminase large subunit family protein | - |
| RR31_RS21320 () | 4327543..4327755 | + | 213 | WP_039268529.1 | hypothetical protein | - |
| RR31_RS21325 () | 4327755..4329230 | + | 1476 | WP_001459763.1 | phage portal protein | - |
| RR31_RS21330 () | 4329208..4331235 | + | 2028 | WP_086714422.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| RR31_RS21335 () | 4331322..4331645 | + | 324 | WP_001097050.1 | DUF2190 family protein | - |
| RR31_RS21340 () | 4331638..4331913 | + | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| RR31_RS21345 () | 4331925..4332503 | + | 579 | WP_000677108.1 | phage tail protein | - |
| RR31_RS21350 () | 4332500..4332901 | + | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| RR31_RS21355 () | 4332913..4333656 | + | 744 | WP_000211109.1 | phage tail protein | - |
| RR31_RS21360 () | 4333717..4334103 | + | 387 | WP_001297778.1 | phage minor tail protein G | - |
| RR31_RS21365 () | 4334112..4334441 | + | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| RR31_RS21370 () | 4334413..4337487 | + | 3075 | WP_039268531.1 | phage tail tape measure protein | - |
| RR31_RS21375 () | 4337487..4337816 | + | 330 | WP_000447253.1 | phage tail protein | - |
| RR31_RS21380 () | 4337826..4338524 | + | 699 | WP_039268532.1 | phage minor tail protein L | - |
| RR31_RS21385 () | 4338529..4339272 | + | 744 | WP_025670561.1 | C40 family peptidase | - |
| RR31_RS21390 () | 4339170..4339811 | + | 642 | WP_028127181.1 | tail assembly protein | - |
| RR31_RS29235 () | 4339884..4340222 | + | 339 | WP_153274582.1 | hypothetical protein | - |
| RR31_RS21395 () | 4340289..4343786 | + | 3498 | WP_039268533.1 | host specificity protein J | - |
| RR31_RS21400 () | 4343856..4344455 | + | 600 | WP_039268534.1 | hypothetical protein | VF |
| RR31_RS28345 () | 4344520..4348281 | + | 3762 | WP_077784975.1 | prophage tail fiber N-terminal domain-containing protein | - |
| RR31_RS27235 () | 4348333..4348464 | + | 132 | Protein_4047 | tail fiber assembly protein | - |
| RR31_RS21415 () | 4348577..4349947 | - | 1371 | WP_039268535.1 | reverse transcriptase | - |
| RR31_RS21420 () | 4349925..4350476 | - | 552 | WP_000543834.1 | SLATT domain-containing protein | - |
| RR31_RS21425 () | 4350699..4350947 | - | 249 | WP_001217553.1 | DinI-like family protein | - |
| RR31_RS21430 () | 4351008..4352105 | - | 1098 | WP_000332259.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| RR31_RS21435 () | 4352194..4353231 | + | 1038 | WP_000543841.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| RR31_RS21440 () | 4353365..4353607 | + | 243 | WP_000891404.1 | envelope stress response protein PspG | - |
| RR31_RS21445 () | 4353773..4354756 | - | 984 | WP_000235508.1 | L-threonine 3-dehydrogenase | VF |
| RR31_RS21450 () | 4354839..4356254 | + | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| RR31_RS21455 () | 4356307..4357386 | + | 1080 | WP_001147328.1 | alanine racemase | - |
| RR31_RS21460 () | 4357639..4358832 | + | 1194 | WP_000486985.1 | aromatic amino acid transaminase | - |
| RR31_RS28355 () | 4359334..4359537 | - | 204 | WP_001321562.1 | hypothetical protein | - |
| RR31_RS21470 () | 4359939..4360652 | + | 714 | WP_001226928.1 | acid phosphatase AphA | - |
| RR31_RS21475 () | 4360763..4361179 | + | 417 | WP_000270375.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|