MGE detailed information
MGE type: Genomic_island MGE length: 17270 bp
Accession: NZ_CP010359 Location: 2943567..2960836 Organism: Pseudomonas plecoglossicida strain NyZ12 Replicon: chromosome
Accession: NZ_CP010359 Location: 2943567..2960836 Organism: Pseudomonas plecoglossicida strain NyZ12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RK21_RS13355 () | 2939663..2939842 | - | 180 | WP_169775263.1 | hypothetical protein | - |
| RK21_RS30130 () | 2939939..2940106 | - | 168 | WP_023660823.1 | hypothetical protein | - |
| RK21_RS13360 () | 2940352..2943570 | + | 3219 | WP_041506094.1 | hypothetical protein | - |
| RK21_RS13365 () | 2943885..2944367 | + | 483 | WP_013972020.1 | hypothetical protein | - |
| RK21_RS13370 () | 2944849..2945331 | + | 483 | WP_013972019.1 | hypothetical protein | - |
| RK21_RS13375 () | 2945723..2946169 | + | 447 | Protein_2686 | hypothetical protein | - |
| RK21_RS13380 () | 2946171..2946857 | + | 687 | Protein_2687 | glutaminase B | - |
| RK21_RS13385 () | 2947431..2947655 | - | 225 | Protein_2688 | glutaminase | - |
| RK21_RS13390 () | 2947848..2948885 | + | 1038 | WP_031324322.1 | sensor domain-containing diguanylate cyclase | - |
| RK21_RS13400 () | 2949279..2949992 | - | 714 | WP_023660817.1 | DUF4225 domain-containing protein | - |
| RK21_RS13405 () | 2949989..2950471 | - | 483 | WP_023660816.1 | Major exported protein | VF |
| RK21_RS13410 () | 2950938..2951609 | - | 672 | WP_023660815.1 | HD domain-containing protein | - |
| RK21_RS13415 () | 2952150..2952392 | + | 243 | WP_023660814.1 | hypothetical protein | - |
| RK21_RS13420 () | 2952557..2952820 | + | 264 | WP_003256566.1 | DUF3077 domain-containing protein | - |
| RK21_RS29060 () | 2952932..2953048 | - | 117 | Protein_2695 | restriction endonuclease | - |
| RK21_RS13425 () | 2953094..2954113 | + | 1020 | WP_010792770.1 | IS30 family transposase IS1382 | Transposase |
| RK21_RS13430 () | 2954068..2954832 | - | 765 | WP_023663375.1 | HNH endonuclease | - |
| RK21_RS13435 () | 2955258..2956004 | + | 747 | Protein_2698 | integrase arm-type DNA-binding domain-containing protein | - |
| RK21_RS13440 () | 2956123..2956668 | - | 546 | WP_023663373.1 | hypothetical protein | - |
| RK21_RS13445 () | 2956661..2957440 | - | 780 | WP_023663372.1 | hypothetical protein | - |
| RK21_RS13450 () | 2957692..2958105 | + | 414 | Protein_2701 | WYL domain-containing protein | - |
| RK21_RS13455 () | 2958880..2960289 | + | 1410 | WP_010953435.1 | Prophage integrase IntA ; Integrase | Integrase |
| RK21_RS29065 () | 2960283..2960576 | - | 294 | WP_010953434.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| RK21_RS13460 () | 2960564..2960836 | - | 273 | WP_010953433.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| RK21_RS13465 () | 2960961..2961206 | - | 246 | WP_010953432.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| RK21_RS13470 () | 2961468..2961740 | + | 273 | WP_031299398.1 | hypothetical protein | - |
| RK21_RS13475 () | 2961838..2962806 | + | 969 | WP_031299399.1 | DUF932 domain-containing protein | - |
| RK21_RS13480 () | 2962886..2963890 | + | 1005 | WP_041506095.1 | YqaJ viral recombinase family protein | - |
| RK21_RS13485 () | 2963983..2964933 | + | 951 | WP_041506096.1 | hypothetical protein | - |
| RK21_RS13490 () | 2964905..2965402 | + | 498 | WP_041506097.1 | DNA repair protein RadC | - |
| RK21_RS30135 () | 2965412..2965582 | + | 171 | WP_017940310.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|