MGE detailed information
MGE type: IScluster/Tn MGE length: 6364 bp
Accession: NZ_CP010330 Location: 3804820..3811183 Organism: Mycobacterium tuberculosis strain F28 Replicon: chromosome
Accession: NZ_CP010330 Location: 3804820..3811183 Organism: Mycobacterium tuberculosis strain F28 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RN05_RS17910 () | 3799876..3800529 | + | 654 | WP_003417903.1 | HAD family phosphatase | - |
| RN05_RS17915 () | 3800568..3802073 | - | 1506 | WP_003417905.1 | type B diterpene cyclase | - |
| RN05_RS17920 () | 3802078..3802968 | - | 891 | WP_003417908.1 | diterpene synthase | - |
| RN05_RS17925 () | 3802977..3804777 | - | 1801 | Protein_3510 | 1-deoxy-D-xylulose-5-phosphate synthase | - |
| RN05_RS17945 () | 3806168..3807157 | - | 990 | WP_003417912.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| RN05_RS17950 () | 3807157..3808209 | - | 1053 | WP_009935184.1 | polyprenyl synthetase family protein | - |
| RN05_RS17955 () | 3808963..3809355 | - | 393 | WP_003417916.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| RN05_RS17960 () | 3809355..3809630 | - | 276 | WP_003912214.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| RN05_RS21900 () | 3809842..3811183 | + | 1342 | Protein_3516 | ISNCY family transposase ISRjo3 | Transposase |
| RN05_RS21905 () | 3811373..3813565 | + | 2193 | Protein_3517 | PE family protein | - |
| RN05_RS17990 () | 3813636..3814508 | - | 873 | WP_003417929.1 | 3-hydroxyacyl-thioester dehydratase HtdY | - |
| RN05_RS17995 () | 3814582..3815292 | + | 711 | WP_003417932.1 | phosphoglycerate mutase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA131 | NC_000962 | 3795100..3801463 | 0 |