MGE detailed information
MGE type: IScluster/Tn MGE length: 13112 bp
Accession: NZ_CP010330 Location: 1158850..1171961 Organism: Mycobacterium tuberculosis strain F28 Replicon: chromosome
Accession: NZ_CP010330 Location: 1158850..1171961 Organism: Mycobacterium tuberculosis strain F28 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RN05_RS05460 () | 1155785..1156354 | + | 570 | WP_003405322.1 | K(+)-transporting ATPase subunit C | - |
| RN05_RS05465 () | 1156358..1157887 | - | 1530 | WP_003405324.1 | HAMP domain-containing histidine kinase | - |
| RN05_RS05470 () | 1157895..1158668 | - | 774 | WP_003405328.1 | two-component system response regulator TrcR | - |
| RN05_RS21020 () | 1158850..1160290 | - | 1441 | Protein_1076 | ISNCY family transposase | - |
| RN05_RS05490 () | 1160476..1160760 | - | 285 | WP_003898699.1 | ESAT-6-like protein EsxI | VF |
| RN05_RS05495 () | 1160787..1161083 | - | 297 | WP_003405345.1 | type VII secretion system ESX-5 protein EsxJ | - |
| RN05_RS05500 () | 1161229..1162404 | - | 1176 | WP_003405368.1 | PPE family protein PPE15 | VF |
| RN05_RS05505 () | 1162481..1162939 | - | 459 | Protein_1080 | PE/PPE C-terminal domain-containing protein | - |
| RN05_RS05520 () | 1164325..1164666 | - | 342 | WP_148639724.1 | PE family protein | - |
| RN05_RS05525 () | 1165454..1165693 | - | 240 | WP_009936438.1 | hypothetical protein | - |
| RN05_RS21035 () | 1165862..1166789 | - | 928 | Protein_1084 | IS5-like element ISMt1 family transposase | - |
| RN05_RS05540 () | 1167071..1168096 | - | 1026 | WP_003405514.1 | serine protease | - |
| RN05_RS05545 () | 1168343..1168966 | + | 624 | WP_003405517.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| RN05_RS05550 () | 1168963..1169844 | + | 882 | WP_003898703.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| RN05_RS05560 () | 1170714..1171961 | + | 1248 | WP_003901078.1 | IS256 family transposase IS1081 | Transposase |
| RN05_RS05565 () | 1172329..1173444 | - | 1116 | WP_003405582.1 | hypothetical protein | - |
| RN05_RS05570 () | 1173401..1173604 | - | 204 | WP_003405585.1 | hypothetical protein | - |
| RN05_RS05575 () | 1173677..1174123 | + | 447 | WP_003405595.1 | oxidation-sensing regulator MosR | - |
| RN05_RS05580 () | 1174172..1175077 | + | 906 | WP_003405600.1 | SDR family oxidoreductase | - |
| RN05_RS22785 () | 1175236..1175415 | - | 180 | WP_023637525.1 | helix-turn-helix domain-containing protein | - |
| RN05_RS22790 () | 1175482..1176221 | - | 740 | Protein_1094 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA10016 | NC_000962 | 1158918..1170670 | 0.003 |