MGE detailed information
MGE type: Conjugative plasmid MGE length: 106397 bp
Accession: NZ_CP010317 Location: 1..106397 Organism: Escherichia coli strain 789 Replicon: plasmid pAPEC-O78-2
Accession: NZ_CP010317 Location: 1..106397 Organism: Escherichia coli strain 789 Replicon: plasmid pAPEC-O78-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AC789_RS25585 () | 1..126 | + | 126 | Protein_0 | IS1 family transposase | - |
| AC789_RS25590 () | 144..635 | + | 492 | Protein_1 | lipopolysaccharide core heptose(II)-phosphate phosphatase | - |
| AC789_RS25595 () | 1030..1488 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| AC789_RS25600 () | 1485..2303 | + | 819 | WP_000646097.1 | hypothetical protein | VF |
| AC789_RS25605 () | 2300..3448 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| AC789_RS28385 () | 3445..3735 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| AC789_RS25610 () | 3750..4301 | + | 552 | WP_000014584.1 | Phospholipase D | VF |
| AC789_RS25615 () | 4391..8158 | + | 3768 | WP_001141534.1 | DNA primase | - |
| AC789_RS25620 () | 8176..8523 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| AC789_RS25625 () | 8520..9212 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| AC789_RS25630 () | 9223..10206 | + | 984 | WP_001191878.1 | hypothetical protein | VF |
| AC789_RS25635 () | 10209..11498 | + | 1290 | WP_001271997.1 | conjugal transfer protein TraO | - |
| AC789_RS25640 () | 11498..12202 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| AC789_RS25645 () | 12202..12729 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| AC789_RS25650 () | 12780..13184 | + | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| AC789_RS25655 () | 13248..13436 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| AC789_RS25660 () | 13420..14220 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| AC789_RS25665 () | 14310..17354 | + | 3045 | WP_044502553.1 | IncI1-type conjugal transfer protein TraU | - |
| AC789_RS25670 () | 17354..17968 | + | 615 | WP_000337400.1 | IncI1-type conjugal transfer protein TraV | - |
| AC789_RS25675 () | 17935..19137 | + | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| AC789_RS25680 () | 19166..19750 | + | 585 | WP_001037985.1 | IncI1-type conjugal transfer protein TraX | - |
| AC789_RS25685 () | 19847..22015 | + | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| AC789_RS25690 () | 22086..22748 | + | 663 | WP_000644794.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| AC789_RS25695 () | 22820..23029 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| AC789_RS30110 () | 23421..23597 | + | 177 | WP_001054900.1 | hypothetical protein | - |
| - () | 24083..24134 | + | 52 | NuclAT_1 | - | - |
| - () | 24083..24134 | + | 52 | NuclAT_1 | - | - |
| - () | 24083..24134 | + | 52 | NuclAT_1 | - | - |
| - () | 24083..24134 | + | 52 | NuclAT_1 | - | - |
| AC789_RS25710 () | 24521..24772 | + | 252 | WP_001291965.1 | hypothetical protein | - |
| AC789_RS25715 () | 24844..24996 | - | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| - () | 25046..25108 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 25046..25108 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 25046..25108 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 25046..25108 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| AC789_RS25720 () | 25288..26496 | + | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| AC789_RS25725 () | 26515..27585 | + | 1071 | WP_000151576.1 | IncI1-type conjugal transfer protein TrbB | - |
| AC789_RS25730 () | 27578..29869 | + | 2292 | WP_001289269.1 | TrbC | - |
| AC789_RS25735 () | 29906..32605 | - | 2700 | WP_001474686.1 | Protein TraI | Relaxase |
| AC789_RS25740 () | 32616..32948 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| AC789_RS25745 () | 33182..33517 | + | 336 | WP_001599393.1 | hypothetical protein | - |
| AC789_RS25750 () | 33603..34451 | - | 849 | WP_001599394.1 | DUF4942 domain-containing protein | - |
| AC789_RS30115 () | 34800..34997 | + | 198 | WP_001161115.1 | hypothetical protein | - |
| AC789_RS25760 () | 35031..35282 | + | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| AC789_RS25765 () | 35313..35507 | - | 195 | WP_001577563.1 | hypothetical protein | VF |
| AC789_RS25770 () | 35569..36510 | - | 942 | WP_000038340.1 | Recombination-promoting nuclease RpnA | VF |
| AC789_RS25775 () | 36575..36841 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| AC789_RS25780 () | 36935..37369 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| AC789_RS25785 () | 38098..38598 | - | 501 | WP_000117626.1 | antirestriction protein ArdA | - |
| AC789_RS25795 () | 39046..40221 | - | 1176 | WP_000942657.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| AC789_RS25800 () | 40351..41070 | - | 720 | WP_001276260.1 | plasmid SOS inhibition protein A | - |
| AC789_RS25805 () | 41067..41501 | - | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| AC789_RS25810 () | 41556..43514 | - | 1959 | WP_001145458.1 | ParB/RepB/Spo0J family partition protein | - |
| AC789_RS25815 () | 43573..43806 | - | 234 | WP_000006012.1 | DUF905 family protein | - |
| AC789_RS25820 () | 43864..44391 | - | 528 | WP_001276127.1 | single-stranded DNA-binding protein | - |
| AC789_RS30120 () | 44760..44828 | + | 69 | Protein_47 | pilus protein | - |
| AC789_RS25825 () | 45161..45352 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| AC789_RS25830 () | 45349..45771 | - | 423 | WP_015058200.1 | DUF1380 family protein | - |
| AC789_RS25835 () | 45818..46120 | - | 303 | WP_014653258.1 | antirestriction protein | - |
| AC789_RS29745 () | 46661..47437 | - | 777 | WP_015058197.1 | hypothetical protein | - |
| AC789_RS25850 () | 47483..47917 | - | 435 | WP_044502554.1 | DUF1380 family protein | - |
| AC789_RS25855 () | 47931..48152 | - | 222 | WP_001104879.1 | hypothetical protein | - |
| AC789_RS25860 () | 48153..48836 | - | 684 | WP_000086149.1 | DNA methylase | - |
| AC789_RS29160 () | 48912..49223 | - | 312 | WP_014640311.1 | hypothetical protein | - |
| AC789_RS25870 () | 49220..50122 | - | 903 | WP_077790361.1 | DUF1281 domain-containing protein | - |
| AC789_RS25875 () | 50540..50788 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| AC789_RS25880 () | 50785..51222 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| AC789_RS25885 () | 51222..52496 | + | 1275 | WP_000457492.1 | Y-family DNA polymerase | - |
| AC789_RS25890 () | 52498..52914 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| AC789_RS25895 () | 52907..53887 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| AC789_RS25900 () | 54301..54609 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| AC789_RS25905 () | 54696..55340 | - | 645 | WP_001144036.1 | ParA family protein | - |
| AC789_RS25910 () | 55519..56298 | - | 780 | WP_001164198.1 | site-specific integrase | - |
| AC789_RS25915 () | 56300..56713 | - | 414 | WP_000465036.1 | hypothetical protein | - |
| AC789_RS25920 () | 57265..58353 | + | 1089 | WP_000952217.1 | transcriptional repressor PifC | - |
| AC789_RS25925 () | 58355..60580 | + | 2226 | WP_000698737.1 | phage T7 exclusion protein | - |
| AC789_RS25930 () | 60630..61529 | - | 900 | WP_000963206.1 | nucleotide-binding protein | - |
| AC789_RS25935 () | 61519..61809 | - | 291 | WP_000111771.1 | hypothetical protein | - |
| AC789_RS25940 () | 62105..62335 | + | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| AC789_RS25945 () | 62332..62748 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| AC789_RS25950 () | 62910..65048 | - | 2139 | WP_000350638.1 | AAA family ATPase | - |
| AC789_RS25955 () | 65402..65659 | + | 258 | WP_000343085.1 | hypothetical protein | - |
| AC789_RS25960 () | 65659..66249 | + | 591 | WP_000194575.1 | hypothetical protein | - |
| AC789_RS25965 () | 66537..68070 | + | 1534 | Protein_75 | AAA family ATPase | - |
| AC789_RS25970 () | 68262..68879 | + | 618 | WP_000521603.1 | hypothetical protein | - |
| AC789_RS25975 () | 69172..70209 | - | 1038 | WP_044502555.1 | permease | - |
| AC789_RS25980 () | 70314..70637 | + | 324 | WP_001175594.1 | helix-turn-helix domain-containing protein | - |
| AC789_RS25985 () | 70738..71448 | + | 711 | WP_024159726.1 | arsenical resistance protein ArsH | - |
| AC789_RS25990 () | 71457..72002 | + | 546 | WP_001286342.1 | sigma-70 family RNA polymerase sigma factor | - |
| AC789_RS25995 () | 72078..72440 | + | 363 | WP_011117603.1 | arsenic metallochaperone ArsD family protein | - |
| AC789_RS26000 () | 72467..74218 | + | 1752 | WP_023171140.1 | Arsenical pump-driving ATPase | VF |
| AC789_RS26005 () | 74292..74660 | - | 369 | WP_011117601.1 | winged helix-turn-helix domain-containing protein | - |
| AC789_RS26010 () | 74723..75535 | - | 813 | WP_011117600.1 | sulfite exporter TauE/SafE family protein | - |
| AC789_RS26015 () | 75747..76283 | + | 537 | WP_011117599.1 | L-amino acid N-acyltransferase MnaT | VF |
| AC789_RS26020 () | 76318..76743 | - | 426 | WP_011117598.1 | glutaredoxin-dependent arsenate reductase | - |
| AC789_RS26025 () | 76756..78045 | - | 1290 | WP_044502556.1 | arsenite efflux transporter membrane subunit ArsB | - |
| AC789_RS26030 () | 78094..78921 | - | 828 | Protein_88 | arsenite efflux transporter ATPase subunit ArsA | - |
| AC789_RS26035 () | 79001..81967 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| AC789_RS26040 () | 81971..82531 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| AC789_RS26045 () | 82841..84418 | + | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| AC789_RS26050 () | 84606..85490 | - | 885 | Protein_92 | arsenite efflux transporter ATPase subunit ArsA | - |
| AC789_RS26060 () | 85531..86759 | + | 1229 | WP_106121298.1 | IS3 family transposase IS2 | Transposase |
| AC789_RS26065 () | 86844..87206 | - | 363 | WP_011117596.1 | arsenite efflux transporter metallochaperone ArsD | - |
| AC789_RS26070 () | 87254..87607 | - | 354 | WP_011117595.1 | transcriptional regulator | - |
| AC789_RS30125 () | 87789..87976 | - | 188 | Protein_96 | hypothetical protein | - |
| AC789_RS26080 () | 88883..89914 | - | 1032 | WP_000907863.1 | replication initiation protein | - |
| AC789_RS26090 () | 90887..91150 | + | 264 | WP_001324596.1 | ash family protein | - |
| AC789_RS26095 () | 91068..91355 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| AC789_RS26100 () | 91797..92330 | + | 534 | WP_001306770.1 | transcription termination factor NusG | - |
| AC789_RS26105 () | 92583..93266 | + | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| AC789_RS26110 () | 93439..93990 | + | 552 | WP_000744644.1 | hypothetical protein | - |
| AC789_RS26115 () | 94152..94406 | + | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| AC789_RS26120 () | 94573..94869 | + | 297 | WP_000494780.1 | hypothetical protein | - |
| AC789_RS26125 () | 95788..96855 | + | 1068 | WP_044502558.1 | hypothetical protein | VF |
| AC789_RS26130 () | 96855..97292 | + | 438 | WP_000539806.1 | hypothetical protein | VF |
| AC789_RS26135 () | 97306..98988 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| AC789_RS26140 () | 98981..100276 | + | 1296 | WP_044502559.1 | type 4b pilus protein PilO2 | - |
| AC789_RS26145 () | 100263..100715 | + | 453 | WP_044502560.1 | hypothetical protein | VF |
| AC789_RS26150 () | 100726..102279 | + | 1554 | WP_044502561.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| AC789_RS26155 () | 102292..103389 | + | 1098 | WP_044502562.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| AC789_RS26160 () | 103407..104021 | + | 615 | WP_000959785.1 | hypothetical protein | VF |
| AC789_RS26165 () | 104031..104591 | + | 561 | WP_000014116.1 | hypothetical protein | VF |
| AC789_RS26170 () | 104576..105232 | + | 657 | WP_001193554.1 | hypothetical protein | VF |
| AC789_RS26175 () | 105232..105642 | + | 411 | Protein_115 | hypothetical protein | VF |
| AC789_RS26180 () | 105698..106395 | + | 698 | Protein_116 | IS1 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|