MGE detailed information
MGE type: Conjugative plasmid MGE length: 144859 bp
Accession: NZ_CP010316 Location: 1..144859 Organism: Escherichia coli strain 789 Replicon: plasmid pAPEC-O78-ColV
Accession: NZ_CP010316 Location: 1..144859 Organism: Escherichia coli strain 789 Replicon: plasmid pAPEC-O78-ColV
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AC789_RS24760 () | 1..370 | - | 370 | WP_064754551.1 | mercuric ion transporter MerT | - |
| AC789_RS24765 () | 442..876 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| AC789_RS24770 () | 935..1243 | + | 309 | WP_000377483.1 | hypothetical protein | - |
| AC789_RS24775 () | 1803..2837 | + | 1035 | WP_001190234.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| AC789_RS24785 () | 3692..5869 | + | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
| AC789_RS24790 () | 5914..6870 | - | 957 | WP_000271277.1 | Ferri-bacillibactin esterase BesA | VF |
| AC789_RS24795 () | 6955..8184 | - | 1230 | WP_000933672.1 | Enterochelin esterase | VF |
| AC789_RS24800 () | 8288..11947 | - | 3660 | WP_001442133.1 | Multidrug efflux ATP-binding/permease protein | VF |
| AC789_RS24805 () | 12087..13202 | - | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| AC789_RS29095 () | 14438..15537 | - | 1100 | Protein_9 | IS481 family transposase ISKpn28 | Transposase |
| AC789_RS28225 () | 16091..16290 | + | 200 | Protein_10 | lysis protein | - |
| AC789_RS24830 () | 16348..16641 | - | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| AC789_RS24850 () | 17268..18496 | + | 1229 | WP_088130945.1 | IS3 family transposase IS2 | Transposase |
| AC789_RS24860 () | 19720..20913 | + | 1194 | WP_000450494.1 | GTP-binding protein | - |
| AC789_RS29695 () | 21091..21240 | + | 150 | Protein_14 | IS3 family transposase IS2 | Transposase |
| AC789_RS28250 () | 21550..22939 | + | 1390 | Protein_15 | ISNCY family transposase ISKpn21 | Transposase |
| AC789_RS24880 () | 23174..24115 | + | 942 | WP_000974762.1 | hypothetical protein | - |
| AC789_RS24885 () | 24244..24438 | - | 195 | Protein_17 | IS200-IS605 family transposase IS200C | Transposase |
| AC789_RS24890 () | 24912..26282 | - | 1371 | WP_001312828.1 | efflux transporter outer membrane subunit | - |
| AC789_RS24895 () | 26286..28226 | - | 1941 | WP_000733252.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| AC789_RS24900 () | 28223..29410 | - | 1188 | WP_000928804.1 | efflux RND transporter periplasmic adaptor subunit | - |
| AC789_RS28265 () | 30391..30716 | + | 326 | Protein_21 | IS3 family transposase IS911 | Transposase |
| AC789_RS28275 () | 32260..32418 | + | 159 | WP_001312823.1 | integrase core domain-containing protein | - |
| AC789_RS24940 () | 33691..34644 | + | 954 | WP_000280980.1 | Protease 7 | VF |
| AC789_RS24950 () | 35077..36186 | + | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| AC789_RS24955 () | 36255..37157 | + | 903 | WP_001312822.1 | hypothetical protein | VF |
| AC789_RS24960 () | 37531..37719 | + | 189 | WP_001332052.1 | hypothetical protein | - |
| AC789_RS24965 () | 37840..38580 | + | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| AC789_RS24970 () | 38865..39842 | - | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| AC789_RS24985 () | 40588..40911 | + | 324 | Protein_30 | IS21 family transposase IS21 | Transposase |
| AC789_RS30090 () | 40913..41017 | + | 105 | Protein_31 | AAA family ATPase | - |
| AC789_RS24990 () | 41078..41591 | + | 514 | Protein_32 | DUF4113 domain-containing protein | - |
| AC789_RS24995 () | 41771..42468 | - | 698 | Protein_33 | IS1 family transposase | - |
| AC789_RS25000 () | 42824..43738 | + | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| AC789_RS25005 () | 43738..44565 | + | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| AC789_RS25010 () | 44562..45419 | + | 858 | WP_000992806.1 | Manganese transport system membrane protein MntB | ARG |
| AC789_RS25015 () | 45416..46273 | + | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| AC789_RS29110 () | 46507..46764 | - | 258 | Protein_38 | Tn3 family transposase | - |
| AC789_RS25020 () | 46762..47175 | + | 414 | Protein_39 | phosphopyruvate hydratase | - |
| AC789_RS25030 () | 47516..47896 | + | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| AC789_RS25035 () | 48276..49469 | - | 1194 | WP_000095526.1 | MFS transporter | - |
| AC789_RS25040 () | 49605..51329 | + | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| AC789_RS25045 () | 51330..52277 | + | 948 | WP_000011907.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| AC789_RS25050 () | 52277..54019 | + | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| AC789_RS25055 () | 54016..55293 | + | 1278 | WP_000750130.1 | L-lysine N6-monooxygenase | VF |
| AC789_RS25060 () | 55375..57576 | + | 2202 | WP_000973517.1 | Ferric aerobactin receptor | VF |
| AC789_RS25065 () | 58101..58798 | + | 698 | Protein_47 | IS1 family transposase | - |
| AC789_RS25070 () | 58809..59471 | - | 663 | WP_000163251.1 | hypothetical protein | - |
| AC789_RS25075 () | 59911..60390 | - | 480 | WP_000190053.1 | hypothetical protein | - |
| AC789_RS25080 () | 60508..60957 | + | 450 | WP_000238252.1 | hypothetical protein | - |
| AC789_RS25085 () | 61585..63087 | + | 1503 | WP_000715081.1 | hypothetical protein | - |
| AC789_RS25090 () | 63313..63504 | + | 192 | WP_000925960.1 | hypothetical protein | - |
| AC789_RS25100 () | 65112..65809 | + | 698 | Protein_53 | IS1 family transposase | - |
| AC789_RS25105 () | 66109..67275 | + | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| AC789_RS25110 () | 67275..68246 | + | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| AC789_RS30095 () | 69058..69396 | + | 339 | WP_200889832.1 | hypothetical protein | - |
| AC789_RS25120 () | 69465..70040 | + | 576 | WP_000343071.1 | hypothetical protein | - |
| AC789_RS25125 () | 70053..70265 | + | 213 | WP_000092896.1 | hypothetical protein | - |
| AC789_RS25130 () | 70526..71497 | - | 972 | WP_000082155.1 | IS110 family transposase ISEc32 | Transposase |
| AC789_RS25135 () | 72022..72324 | + | 303 | WP_072256028.1 | antirestriction protein | - |
| AC789_RS25140 () | 72324..72785 | + | 462 | WP_042007484.1 | DUF1380 family protein | - |
| AC789_RS25145 () | 72785..72967 | + | 183 | WP_001027505.1 | hypothetical protein | - |
| AC789_RS30100 () | 72955..73283 | - | 329 | Protein_63 | pilus assembly protein | - |
| AC789_RS25155 () | 73961..74191 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| AC789_RS25160 () | 74243..75604 | + | 1362 | WP_000170680.1 | DUF3560 domain-containing protein | - |
| AC789_RS25165 () | 75652..76215 | + | 564 | WP_001332335.1 | class I SAM-dependent methyltransferase | - |
| AC789_RS25170 () | 76301..76720 | - | 420 | WP_015056142.1 | hypothetical protein | - |
| AC789_RS25180 () | 77021..77653 | + | 633 | WP_000290818.1 | single-stranded DNA-binding protein | - |
| AC789_RS25185 () | 77616..77849 | + | 234 | WP_000005988.1 | DUF905 family protein | - |
| AC789_RS25190 () | 77913..79871 | + | 1959 | WP_000117202.1 | ParB/RepB/Spo0J family partition protein | - |
| AC789_RS25195 () | 79926..80360 | + | 435 | WP_044502442.1 | conjugation system SOS inhibitor PsiB | - |
| AC789_RS25200 () | 80357..81076 | + | 720 | WP_000994098.1 | plasmid SOS inhibition protein A | - |
| - () | 81088..81299 | + | 212 | NuclAT_0 | - | - |
| - () | 81088..81299 | + | 212 | NuclAT_0 | - | - |
| - () | 81088..81299 | + | 212 | NuclAT_0 | - | - |
| - () | 81088..81299 | + | 212 | NuclAT_0 | - | - |
| AC789_RS25210 () | 81352..81513 | + | 162 | WP_001332444.1 | type I toxin-antitoxin system Hok family toxin | - |
| AC789_RS30105 () | 81814..82111 | - | 298 | Protein_74 | hypothetical protein | - |
| AC789_RS25225 () | 82412..82699 | + | 288 | WP_000107520.1 | hypothetical protein | - |
| AC789_RS25230 () | 82818..83639 | + | 822 | WP_001234468.1 | DUF945 domain-containing protein | - |
| AC789_RS25235 () | 83935..84525 | - | 591 | Protein_77 | hypothetical protein | VF |
| AC789_RS25240 () | 84861..85244 | + | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| AC789_RS25245 () | 85431..86120 | + | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| AC789_RS25250 () | 86219..86614 | + | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| AC789_RS25255 () | 86647..87012 | + | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| AC789_RS25260 () | 87027..87338 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| AC789_RS25265 () | 87360..87926 | + | 567 | WP_000399785.1 | type IV conjugative transfer system protein TraE | - |
| AC789_RS25270 () | 87937..88641 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| AC789_RS25275 () | 88641..90068 | + | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| AC789_RS25280 () | 90058..90648 | + | 591 | WP_000002796.1 | conjugal transfer protein TraP | - |
| AC789_RS25285 () | 90602..90832 | + | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| AC789_RS25290 () | 90844..91095 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| AC789_RS25295 () | 91092..91607 | + | 516 | WP_000809841.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AC789_RS28350 () | 91742..91963 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| AC789_RS25305 () | 92123..94750 | + | 2628 | WP_001064252.1 | type IV secretion system protein TraC | - |
| AC789_RS25310 () | 94747..95133 | + | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| AC789_RS25315 () | 95130..95762 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| AC789_RS25320 () | 95759..96751 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| AC789_RS25325 () | 96760..97398 | + | 639 | WP_000777693.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| AC789_RS25330 () | 97395..99203 | + | 1809 | WP_044502452.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| AC789_RS25335 () | 99230..99487 | + | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| AC789_RS25340 () | 99480..100223 | + | 744 | WP_001030389.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| AC789_RS25345 () | 100239..100586 | + | 348 | WP_001287676.1 | conjugal transfer protein TrbA | - |
| AC789_RS25350 () | 100705..100989 | + | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| AC789_RS25355 () | 100976..101521 | + | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| AC789_RS25360 () | 101451..101813 | + | 363 | WP_071779407.1 | P-type conjugative transfer protein TrbJ | - |
| AC789_RS25365 () | 101813..103186 | + | 1374 | WP_001137358.1 | conjugal transfer protein TraH | - |
| AC789_RS25370 () | 103183..106005 | + | 2823 | WP_001007012.1 | conjugal transfer mating pair stabilization protein TraG | - |
| AC789_RS25375 () | 106020..106523 | + | 504 | WP_000605510.1 | hypothetical protein | - |
| AC789_RS25380 () | 106555..107286 | + | 732 | WP_001447147.1 | complement resistance protein TraT | - |
| AC789_RS25385 () | 107538..109727 | + | 2190 | WP_044502453.1 | type IV conjugative transfer system coupling protein TraD | - |
| AC789_RS25390 () | 109727..114997 | + | 5271 | WP_000986993.1 | Multifunctional conjugation protein TraI | Relaxase |
| AC789_RS25395 () | 115017..115763 | + | 747 | WP_000205759.1 | conjugal transfer pilus acetylase TraX | - |
| AC789_RS25400 () | 115818..116378 | + | 561 | WP_000139359.1 | fertility inhibition protein FinO | - |
| AC789_RS25405 () | 116516..116728 | + | 213 | WP_001311693.1 | hypothetical protein | - |
| AC789_RS25410 () | 116971..117372 | + | 402 | WP_001233870.1 | thermonuclease family protein | - |
| AC789_RS25415 () | 117417..117677 | + | 261 | WP_000083818.1 | replication regulatory protein RepA | - |
| AC789_RS25420 () | 117903..117977 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| AC789_RS25425 () | 117970..118827 | + | 858 | WP_000130940.1 | incFII family plasmid replication initiator RepA | - |
| AC789_RS25430 () | 119824..121401 | - | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| AC789_RS25435 () | 121711..122271 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| AC789_RS25440 () | 122275..125241 | + | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| AC789_RS25445 () | 125299..125541 | + | 243 | WP_000844627.1 | transposase | - |
| AC789_RS25450 () | 125573..126223 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| AC789_RS25455 () | 126329..127528 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| AC789_RS25460 () | 127560..128444 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| AC789_RS25465 () | 128582..128989 | - | 408 | WP_200889831.1 | cysteine hydrolase | - |
| AC789_RS25470 () | 128978..130729 | + | 1752 | Protein_124 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| AC789_RS25475 () | 130876..131145 | + | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| AC789_RS25480 () | 131142..131423 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AC789_RS25485 () | 131469..132317 | + | 849 | WP_001057989.1 | 3'-5' exonuclease | - |
| AC789_RS25490 () | 132503..134383 | + | 1881 | WP_001283335.1 | colicin | - |
| AC789_RS25495 () | 134405..134740 | - | 336 | WP_001080729.1 | colicin 1A immunity protein | - |
| AC789_RS25500 () | 134869..135126 | + | 258 | WP_000142431.1 | hypothetical protein | - |
| AC789_RS25505 () | 135146..135736 | - | 591 | WP_001350923.1 | hypothetical protein | - |
| AC789_RS25510 () | 135733..135993 | - | 261 | WP_000343091.1 | hypothetical protein | - |
| AC789_RS25515 () | 136286..136738 | + | 453 | WP_000670963.1 | N-acetyltransferase | - |
| AC789_RS25520 () | 136794..137060 | - | 267 | WP_001017350.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| AC789_RS25525 () | 137057..137326 | - | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| AC789_RS28375 () | 137328..138105 | - | 778 | Protein_136 | Gfo/Idh/MocA family oxidoreductase | - |
| AC789_RS29720 () | 138266..138502 | + | 237 | WP_001323890.1 | colicin V immunity protein | - |
| AC789_RS25545 () | 138480..138791 | + | 312 | WP_001259758.1 | colicin V | - |
| AC789_RS25550 () | 138961..141075 | - | 2115 | WP_001183604.1 | peptidase domain-containing ABC transporter | - |
| AC789_RS25555 () | 141050..142324 | - | 1275 | WP_000489608.1 | HlyD family secretion protein | - |
| AC789_RS25560 () | 143006..143203 | + | 198 | WP_001324224.1 | toxin-antitoxin system protein | - |
| AC789_RS25565 () | 143200..143382 | + | 183 | WP_000969988.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AC789_RS25570 () | 143494..144859 | - | 1366 | Protein_143 | Tn3-like element TnAs3 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|