MGE detailed information
MGE type: Prophage MGE length: 40283 bp
Accession: NZ_CP010315 Location: 1769405..1809687 Organism: Escherichia coli strain 789 Replicon: chromosome
Accession: NZ_CP010315 Location: 1769405..1809687 Organism: Escherichia coli strain 789 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AC789_RS08600 () | 1765918..1766664 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| AC789_RS08605 () | 1766753..1767439 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| AC789_RS08610 () | 1767617..1767820 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| AC789_RS08615 () | 1767856..1769316 | - | 1461 | WP_000527758.1 | mannitol dehydrogenase family protein | - |
| AC789_RS08620 () | 1769405..1770688 | - | 1284 | Protein_1640 | MHS family MFS transporter YdfJ | - |
| AC789_RS29375 () | 1771291..1771404 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| AC789_RS08630 () | 1771473..1771706 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| AC789_RS08635 () | 1772023..1772613 | + | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| AC789_RS08640 () | 1772711..1773286 | - | 576 | WP_001698950.1 | tail fiber assembly protein | - |
| AC789_RS27065 () | 1773286..1776648 | - | 3363 | WP_071925355.1 | prophage tail fiber N-terminal domain-containing protein | - |
| AC789_RS08660 () | 1776713..1777312 | - | 600 | WP_032292241.1 | Outer membrane protein X | VF |
| AC789_RS08665 () | 1777380..1780859 | - | 3480 | WP_044502227.1 | host specificity protein J | - |
| AC789_RS26230 () | 1780920..1781589 | - | 670 | Protein_1648 | tail assembly protein | - |
| AC789_RS08675 () | 1781487..1782230 | - | 744 | WP_044502228.1 | C40 family peptidase | - |
| AC789_RS08680 () | 1782235..1782933 | - | 699 | WP_044502229.1 | phage minor tail protein L | - |
| AC789_RS08685 () | 1782933..1783262 | - | 330 | WP_000847347.1 | phage tail protein | - |
| AC789_RS08690 () | 1783259..1784623 | - | 1365 | WP_071925356.1 | phage tail tape measure protein | - |
| AC789_RS08695 () | 1784620..1786545 | - | 1926 | WP_001549229.1 | phage terminase large subunit family protein | - |
| AC789_RS08700 () | 1786520..1787065 | - | 546 | WP_000453603.1 | DNA-packaging protein | - |
| AC789_RS08715 () | 1787453..1787686 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| AC789_RS08720 () | 1787744..1788154 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| AC789_RS08725 () | 1788306..1788479 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| AC789_RS08730 () | 1788651..1788806 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| AC789_RS29380 () | 1788885..1788950 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| AC789_RS27070 () | 1788953..1789141 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| AC789_RS08735 () | 1789152..1789364 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| AC789_RS08740 () | 1789727..1790224 | - | 498 | WP_044502230.1 | DUF2514 domain-containing protein | - |
| AC789_RS08745 () | 1790221..1790754 | - | 534 | WP_044502231.1 | lysozyme | - |
| AC789_RS08750 () | 1790751..1791062 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| AC789_RS08755 () | 1791067..1791282 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| AC789_RS08760 () | 1792036..1792251 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| AC789_RS08765 () | 1792552..1792764 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| AC789_RS29385 () | 1792819..1792908 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| AC789_RS08770 () | 1793186..1793938 | - | 753 | WP_001047135.1 | antitermination protein | - |
| AC789_RS08775 () | 1793952..1795001 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| AC789_RS08780 () | 1795003..1795281 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| AC789_RS08785 () | 1795348..1795599 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| AC789_RS08790 () | 1795816..1795971 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| AC789_RS08795 () | 1796043..1796330 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| AC789_RS08800 () | 1796330..1796569 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| AC789_RS27075 () | 1796594..1796899 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| AC789_RS08805 () | 1797102..1797434 | + | 333 | WP_001301033.1 | protein FlxA | - |
| AC789_RS08810 () | 1797871..1799185 | - | 1315 | Protein_1678 | ISNCY family transposase ISCARN112 | Transposase |
| AC789_RS30010 () | 1799954..1800241 | - | 288 | Protein_1679 | hypothetical protein | - |
| AC789_RS08825 () | 1800852..1801208 | - | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| AC789_RS08830 () | 1801205..1801627 | - | 423 | WP_001151262.1 | DUF977 family protein | - |
| AC789_RS08835 () | 1801668..1802633 | - | 966 | WP_000054512.1 | hypothetical protein | - |
| AC789_RS08840 () | 1802614..1803135 | - | 522 | WP_000705358.1 | hypothetical protein | - |
| AC789_RS08845 () | 1803119..1803349 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| AC789_RS08850 () | 1803433..1803840 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| AC789_RS08855 () | 1804007..1804162 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| AC789_RS08860 () | 1804322..1804540 | + | 219 | WP_001171942.1 | hypothetical protein | - |
| AC789_RS08870 () | 1805108..1805296 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| AC789_RS08875 () | 1805293..1805484 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| AC789_RS08880 () | 1805577..1808048 | + | 2472 | WP_000048342.1 | exonuclease | - |
| AC789_RS08885 () | 1808121..1808372 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| AC789_RS08890 () | 1808407..1809687 | + | 1281 | WP_044502232.1 | Putative defective protein IntQ ; Integrase | Integrase |
| AC789_RS28750 () | 1809707..1809817 | - | 111 | WP_001360138.1 | hypothetical protein | - |
| AC789_RS08895 () | 1809875..1810894 | - | 1020 | WP_000836079.1 | Zn-dependent oxidoreductase | - |
| AC789_RS08900 () | 1810906..1812120 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| AC789_RS08905 () | 1812326..1812652 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| AC789_RS08910 () | 1812787..1813128 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| AC789_RS08915 () | 1813163..1813723 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| AC789_RS08920 () | 1813726..1814436 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|