MGE detailed information
MGE type: Genomic_island MGE length: 14691 bp
Accession: NZ_CP010240 Location: 955737..970427 Organism: Escherichia coli strain C7 Replicon: chromosome
Accession: NZ_CP010240 Location: 955737..970427 Organism: Escherichia coli strain C7 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG29_RS04970 () | 953342..954067 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| RG29_RS04975 () | 954104..954643 | - | 540 | WP_000824105.1 | type 1 fimbrial protein | - |
| RG29_RS04980 () | 954708..955256 | - | 549 | WP_000695546.1 | type 1 fimbrial major subunit FimA | - |
| RG29_RS04995 () | 955737..956333 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| RG29_RS05000 () | 956811..957413 | - | 603 | WP_000790583.1 | type 1 fimbria switch DNA invertase FimB | - |
| RG29_RS05010 () | 958869..959585 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| RG29_RS05015 () | 959605..960711 | + | 1107 | WP_001298927.1 | N-acetylneuraminate epimerase | - |
| RG29_RS05020 () | 960776..961756 | + | 981 | WP_000991444.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| RG29_RS05035 () | 962911..963282 | - | 372 | WP_001193488.1 | TA system toxin CbtA family protein | Toxin Detail |
| RG29_RS05040 () | 963321..963686 | - | 366 | WP_001059301.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| RG29_RS05045 () | 963712..963933 | - | 222 | WP_000691983.1 | DUF987 domain-containing protein | - |
| RG29_RS05050 () | 963930..964472 | - | 543 | WP_015740440.1 | DNA repair protein RadC | - |
| RG29_RS05055 () | 964485..964928 | - | 444 | WP_001096016.1 | antirestriction protein | - |
| RG29_RS05060 () | 964959..965780 | - | 822 | WP_001234409.1 | DUF945 domain-containing protein | - |
| RG29_RS05065 () | 965900..966373 | - | 474 | WP_001298943.1 | hypothetical protein | - |
| RG29_RS05070 () | 966445..966897 | - | 453 | WP_000734321.1 | hypothetical protein | - |
| RG29_RS05075 () | 966933..967649 | - | 717 | WP_000174910.1 | WYL domain-containing protein | - |
| RG29_RS05080 () | 967893..968768 | - | 876 | WP_001039469.1 | GTPase family protein | - |
| RG29_RS05085 () | 968853..969737 | - | 885 | WP_000240138.1 | hypothetical protein | - |
| RG29_RS05090 () | 970221..970427 | + | 207 | WP_000213332.1 | AlpA family phage regulatory protein | - |
| RG29_RS05095 () | 970524..971117 | + | 594 | WP_000656300.1 | hypothetical protein | - |
| RG29_RS05100 () | 971316..971891 | + | 576 | WP_001180706.1 | inovirus-type Gp2 protein | - |
| RG29_RS30360 () | 972062..972412 | + | 351 | Protein_908 | hypothetical protein | - |
| RG29_RS05110 () | 972654..973016 | + | 363 | WP_000859002.1 | 6-carboxytetrahydropterin synthase QueD | - |
| RG29_RS05115 () | 973073..975328 | - | 2256 | WP_001083255.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|