MGE detailed information
MGE type: Prophage MGE length: 48732 bp
Accession: NZ_CP010240 Location: 3338088..3386819 Organism: Escherichia coli strain C7 Replicon: chromosome
Accession: NZ_CP010240 Location: 3338088..3386819 Organism: Escherichia coli strain C7 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG29_RS30640 () | 3334077..3334124 | + | 48 | WP_211180494.1 | protein YnaN | - |
| RG29_RS17630 () | 3334138..3335121 | + | 984 | WP_000387395.1 | zinc transporter ZntB | - |
| RG29_RS17640 () | 3335599..3336972 | + | 1374 | WP_000123745.1 | ATP-dependent RNA helicase DbpA | - |
| RG29_RS17645 () | 3337101..3338036 | - | 936 | WP_001157394.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| RG29_RS17650 () | 3338088..3339323 | - | 1236 | WP_000040844.1 | site-specific integrase | - |
| RG29_RS17655 () | 3339325..3339540 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| RG29_RS17660 () | 3339640..3339828 | - | 189 | WP_073519364.1 | DUF1187 family protein | - |
| - () | 3339644..3339822 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 3339644..3339822 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 3339644..3339822 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 3339644..3339822 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| RG29_RS17665 () | 3339821..3340015 | - | 195 | WP_021500490.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| RG29_RS17670 () | 3340079..3341167 | - | 1089 | WP_063100796.1 | recombinase RecT | - |
| RG29_RS17675 () | 3341182..3344343 | - | 3162 | WP_073519365.1 | exodeoxyribonuclease VIII | - |
| RG29_RS17680 () | 3344444..3344719 | - | 276 | WP_073519366.1 | hypothetical protein | - |
| RG29_RS17685 () | 3344794..3344970 | - | 177 | WP_000245533.1 | hypothetical protein | - |
| RG29_RS17690 () | 3344964..3345185 | - | 222 | WP_073519367.1 | killing protein KilR | - |
| RG29_RS17700 () | 3345581..3345814 | + | 234 | WP_001559054.1 | hypothetical protein | - |
| RG29_RS17705 () | 3345776..3346081 | - | 306 | WP_073519369.1 | hypothetical protein | - |
| RG29_RS17710 () | 3346331..3346792 | - | 462 | WP_000753628.1 | helix-turn-helix domain-containing protein | - |
| RG29_RS17715 () | 3346900..3347175 | + | 276 | WP_061892277.1 | helix-turn-helix domain-containing protein | - |
| RG29_RS17720 () | 3347159..3347581 | + | 423 | WP_057514222.1 | hypothetical protein | - |
| RG29_RS17725 () | 3347594..3347890 | + | 297 | WP_000417086.1 | hypothetical protein | - |
| RG29_RS17730 () | 3347891..3348142 | - | 252 | WP_000010975.1 | hypothetical protein | - |
| RG29_RS30010 () | 3348432..3349346 | + | 915 | WP_149026245.1 | hypothetical protein | - |
| RG29_RS30015 () | 3349339..3349800 | + | 462 | WP_187658851.1 | replication protein | - |
| RG29_RS17745 () | 3349835..3350620 | + | 786 | WP_073519371.1 | DUF1627 domain-containing protein | - |
| RG29_RS17750 () | 3350677..3350930 | + | 254 | Protein_3176 | DNA-binding protein | - |
| RG29_RS17755 () | 3350927..3351223 | + | 297 | WP_054626788.1 | DUF4406 domain-containing protein | - |
| RG29_RS17760 () | 3351416..3351730 | + | 315 | WP_073519372.1 | hypothetical protein | - |
| RG29_RS17765 () | 3351727..3352056 | + | 330 | WP_061351715.1 | ead/Ea22-like family protein | - |
| RG29_RS17770 () | 3352058..3352414 | + | 357 | WP_077898318.1 | hypothetical protein | - |
| RG29_RS30440 () | 3352505..3352678 | + | 174 | WP_163428211.1 | hypothetical protein | - |
| RG29_RS17775 () | 3352809..3353042 | + | 234 | WP_061351723.1 | hypothetical protein | - |
| RG29_RS17785 () | 3353497..3353652 | + | 156 | WP_000813259.1 | type I toxin-antitoxin system Hok family toxin | - |
| RG29_RS30445 () | 3353875..3354048 | + | 174 | WP_000687430.1 | hypothetical protein | - |
| RG29_RS17790 () | 3354108..3354707 | + | 600 | WP_000940332.1 | DUF1367 family protein | - |
| RG29_RS17795 () | 3354707..3354997 | + | 291 | WP_073519375.1 | DUF1364 domain-containing protein | - |
| RG29_RS17800 () | 3354994..3355536 | + | 543 | WP_000640136.1 | DUF1133 family protein | - |
| RG29_RS17805 () | 3355766..3356507 | + | 742 | Protein_3188 | AraC family transcriptional regulator | - |
| RG29_RS17810 () | 3356487..3356684 | - | 198 | WP_000898679.1 | hypothetical protein | - |
| RG29_RS17815 () | 3356683..3357075 | + | 393 | WP_001351476.1 | holin | - |
| RG29_RS17820 () | 3357065..3357340 | + | 276 | WP_000950570.1 | phage holin family protein | - |
| RG29_RS17825 () | 3357343..3357720 | + | 378 | WP_000014553.1 | M15 family metallopeptidase | - |
| RG29_RS30020 () | 3357735..3357917 | + | 183 | WP_149026241.1 | hypothetical protein | - |
| RG29_RS17830 () | 3358042..3358254 | - | 213 | WP_071702711.1 | KTSC domain-containing protein | - |
| RG29_RS17835 () | 3358230..3358409 | + | 180 | WP_032218059.1 | hypothetical protein | - |
| RG29_RS17840 () | 3358527..3359315 | + | 789 | WP_073519376.1 | ParB/Srx family N-terminal domain-containing protein | - |
| RG29_RS17845 () | 3359308..3360240 | + | 933 | WP_069901011.1 | hypothetical protein | - |
| RG29_RS17850 () | 3360176..3360427 | + | 252 | WP_001307172.1 | hypothetical protein | - |
| RG29_RS17855 () | 3360431..3361522 | + | 1092 | WP_073519377.1 | terminase small subunit | - |
| RG29_RS17860 () | 3361512..3362840 | + | 1329 | WP_000021158.1 | terminase | - |
| RG29_RS17865 () | 3362859..3364295 | + | 1437 | WP_001559065.1 | DUF1073 domain-containing protein | - |
| RG29_RS17870 () | 3364240..3365073 | + | 834 | WP_001018390.1 | hypothetical protein | - |
| RG29_RS17875 () | 3365054..3366088 | + | 1035 | Protein_3203 | DUF2213 domain-containing protein | - |
| RG29_RS17900 () | 3367399..3367689 | + | 291 | Protein_3205 | NUDIX hydrolase | - |
| RG29_RS17905 () | 3367682..3368299 | + | 618 | WP_057107048.1 | hypothetical protein | - |
| RG29_RS17910 () | 3368314..3369342 | + | 1029 | WP_001272370.1 | hypothetical protein | - |
| RG29_RS17915 () | 3369399..3369869 | + | 471 | WP_000780861.1 | hypothetical protein | - |
| RG29_RS17920 () | 3369869..3370309 | + | 441 | WP_000175376.1 | hypothetical protein | - |
| RG29_RS17925 () | 3370306..3370746 | + | 441 | WP_000762301.1 | hypothetical protein | - |
| RG29_RS17930 () | 3370733..3371677 | + | 945 | WP_001139505.1 | hypothetical protein | - |
| RG29_RS17935 () | 3371677..3373014 | + | 1338 | WP_000506595.1 | hypothetical protein | - |
| RG29_RS17940 () | 3373038..3373469 | + | 432 | WP_000938146.1 | hypothetical protein | - |
| RG29_RS17945 () | 3373466..3374083 | + | 618 | WP_000684992.1 | hypothetical protein | - |
| RG29_RS17950 () | 3374148..3376223 | + | 2076 | WP_000918396.1 | hypothetical protein | - |
| RG29_RS17955 () | 3376227..3376895 | + | 669 | WP_000056327.1 | hypothetical protein | - |
| RG29_RS17960 () | 3376892..3377158 | + | 267 | WP_000209262.1 | hypothetical protein | - |
| RG29_RS17965 () | 3377158..3378165 | + | 1008 | WP_001271167.1 | hypothetical protein | - |
| RG29_RS17970 () | 3378165..3378878 | + | 714 | WP_000063620.1 | phage baseplate protein | - |
| RG29_RS17975 () | 3379161..3379508 | + | 348 | WP_001261327.1 | hypothetical protein | - |
| RG29_RS17980 () | 3379658..3380818 | + | 1161 | WP_000426902.1 | type I restriction enzyme HsdR N-terminal domain-containing protein | - |
| RG29_RS17985 () | 3380859..3382085 | + | 1227 | WP_072277864.1 | baseplate J/gp47 family protein | - |
| RG29_RS17990 () | 3382069..3382695 | + | 627 | WP_001199731.1 | hypothetical protein | - |
| RG29_RS17995 () | 3382692..3384245 | + | 1554 | WP_077898319.1 | phage tail protein | - |
| RG29_RS18000 () | 3384248..3384793 | + | 546 | WP_077898320.1 | tail fiber assembly protein | - |
| RG29_RS18005 () | 3384817..3386250 | + | 1434 | WP_073519379.1 | prophage tail fiber N-terminal domain-containing protein | - |
| RG29_RS18010 () | 3386250..3386819 | + | 570 | WP_077898321.1 | DUF4376 domain-containing protein | - |
| RG29_RS18015 () | 3387056..3387727 | + | 672 | WP_001057015.1 | hypothetical protein | - |
| RG29_RS18020 () | 3387724..3388830 | + | 1107 | WP_000072814.1 | XRE family transcriptional regulator | - |
| RG29_RS18025 () | 3389383..3389817 | - | 435 | WP_001082294.1 | universal stress protein UspF | - |
| RG29_RS18030 () | 3389958..3391091 | - | 1134 | WP_000837924.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|