MGE detailed information
MGE type: Genomic_island MGE length: 20850 bp
Accession: NZ_CP010238 Location: 2585631..2606480 Organism: Escherichia coli strain S50 Replicon: chromosome
Accession: NZ_CP010238 Location: 2585631..2606480 Organism: Escherichia coli strain S50 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG72_RS13490 () | 2582343..2582705 | - | 363 | WP_000859002.1 | 6-carboxytetrahydropterin synthase QueD | - |
| RG72_RS13500 () | 2583025..2584636 | - | 1612 | Protein_2411 | IS66-like element ISEc23 family transposase | - |
| RG72_RS13505 () | 2584667..2585017 | - | 351 | WP_000624722.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| RG72_RS13510 () | 2585014..2585441 | - | 428 | Protein_2413 | transposase | - |
| RG72_RS13515 () | 2585545..2585837 | - | 293 | Protein_2414 | hypothetical protein | - |
| RG72_RS13520 () | 2586008..2586583 | - | 576 | WP_001180706.1 | inovirus-type Gp2 protein | - |
| RG72_RS13525 () | 2586782..2587375 | - | 594 | WP_000656300.1 | hypothetical protein | - |
| RG72_RS13530 () | 2587472..2587678 | - | 207 | WP_053877267.1 | helix-turn-helix domain-containing protein | - |
| RG72_RS13535 () | 2588162..2589046 | + | 885 | WP_000240138.1 | hypothetical protein | - |
| RG72_RS13540 () | 2589131..2590006 | + | 876 | WP_001039469.1 | GTPase family protein | - |
| RG72_RS13545 () | 2590250..2590912 | + | 663 | WP_073569645.1 | WYL domain-containing protein | - |
| RG72_RS13550 () | 2590916..2592487 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| RG72_RS13555 () | 2592507..2592854 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| RG72_RS13560 () | 2592854..2593531 | - | 678 | WP_001299364.1 | IS66 family transposase ISCro1 | Transposase |
| RG72_RS13565 () | 2593709..2594161 | + | 453 | WP_073569646.1 | hypothetical protein | - |
| RG72_RS13570 () | 2594233..2594706 | + | 474 | WP_001298943.1 | hypothetical protein | - |
| RG72_RS13575 () | 2594826..2595647 | + | 822 | WP_001234409.1 | DUF945 domain-containing protein | - |
| RG72_RS13580 () | 2595678..2596121 | + | 444 | WP_001096016.1 | antirestriction protein | - |
| RG72_RS13585 () | 2596134..2596676 | + | 543 | WP_015740440.1 | DNA repair protein RadC | - |
| RG72_RS13590 () | 2596673..2596894 | + | 222 | WP_000691983.1 | DUF987 domain-containing protein | - |
| RG72_RS13595 () | 2596920..2597285 | + | 366 | WP_001059301.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| RG72_RS13600 () | 2597324..2597695 | + | 372 | WP_001193488.1 | TA system toxin CbtA family protein | Toxin Detail |
| RG72_RS13610 () | 2598269..2599267 | + | 999 | WP_001240355.1 | membrane protein | - |
| RG72_RS13615 () | 2599378..2600250 | - | 873 | WP_000168567.1 | HNH endonuclease | - |
| RG72_RS13620 () | 2600332..2600454 | + | 123 | WP_001338066.1 | hypothetical protein | - |
| RG72_RS13625 () | 2600462..2601442 | - | 981 | WP_001366032.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| RG72_RS13630 () | 2601507..2602613 | - | 1107 | WP_001044128.1 | N-acetylneuraminate epimerase | - |
| RG72_RS13635 () | 2602632..2603348 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| RG72_RS13645 () | 2604804..2605406 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| RG72_RS13650 () | 2605884..2606480 | + | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| RG72_RS13660 () | 2606960..2607508 | + | 549 | WP_000695543.1 | type 1 fimbrial major subunit FimA | - |
| RG72_RS13665 () | 2607573..2608112 | + | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| RG72_RS13670 () | 2608149..2608874 | + | 726 | WP_000066557.1 | type 1 fimbria chaperone FimC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|