MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP010238 Location: 2418704..2428055 Organism: Escherichia coli strain S50 Replicon: chromosome
Accession: NZ_CP010238 Location: 2418704..2428055 Organism: Escherichia coli strain S50 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG72_RS12655 () | 2415435..2416154 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| RG72_RS12660 () | 2416151..2417782 | - | 1632 | WP_001216486.1 | sensor histidine kinase | - |
| RG72_RS12665 () | 2417963..2418193 | + | 231 | WP_000371700.1 | (4Fe-4S)-binding protein | - |
| RG72_RS12670 () | 2418205..2418477 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| RG72_RS12680 () | 2418704..2419000 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| RG72_RS12685 () | 2419028..2419201 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| RG72_RS12690 () | 2419320..2420837 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| RG72_RS12695 () | 2421074..2422531 | - | 1458 | WP_000856834.1 | dipeptide/tripeptide permease DtpC | - |
| RG72_RS12700 () | 2422590..2424737 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| RG72_RS12705 () | 2424817..2426151 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| RG72_RS12715 () | 2426517..2428055 | - | 1539 | WP_001187182.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| RG72_RS12730 () | 2428854..2429429 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| RG72_RS12735 () | 2429466..2431163 | - | 1698 | WP_000068936.1 | protein-disulfide reductase DsbD | - |
| RG72_RS12740 () | 2431139..2431477 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| RG72_RS12745 () | 2431593..2432894 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.007 |