MGE detailed information
MGE type: Prophage MGE length: 29740 bp
Accession: NZ_CP010237 Location: 4179727..4209466 Organism: Escherichia coli strain S43 Replicon: chromosome
Accession: NZ_CP010237 Location: 4179727..4209466 Organism: Escherichia coli strain S43 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG71_RS21815 () | 4175625..4176845 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| RG71_RS21820 () | 4176970..4177665 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| RG71_RS21825 () | 4177618..4178910 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| RG71_RS21830 () | 4179070..4179684 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| RG71_RS21835 () | 4179727..4180581 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| RG71_RS21840 () | 4180583..4181200 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| RG71_RS21845 () | 4181211..4183634 | - | 2424 | WP_073528591.1 | dimethyl sulfoxide reductase subunit A | - |
| RG71_RS21850 () | 4183695..4186122 | - | 2428 | Protein_3895 | dimethyl sulfoxide reductase subunit A | - |
| RG71_RS21860 () | 4186321..4186626 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| RG71_RS21865 () | 4186734..4187444 | + | 711 | WP_072104773.1 | YnfC family lipoprotein | - |
| RG71_RS21870 () | 4187447..4188007 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| RG71_RS21875 () | 4188042..4188383 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| RG71_RS21880 () | 4188518..4188844 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| RG71_RS21890 () | 4189050..4190273 | + | 1224 | WP_073528452.1 | starvation-sensing protein RspA | - |
| RG71_RS21895 () | 4190318..4190566 | + | 249 | Protein_3902 | IS3 family transposase ISEhe3 | Transposase |
| RG71_RS21900 () | 4190631..4191782 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| RG71_RS21910 () | 4191792..4192688 | + | 897 | Protein_3904 | IS3 family transposase ISEhe3 | Transposase |
| RG71_RS21920 () | 4192906..4193211 | - | 306 | WP_073528454.1 | hypothetical protein | - |
| RG71_RS21925 () | 4193236..4193475 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| RG71_RS21930 () | 4193475..4193762 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| RG71_RS21935 () | 4193834..4193989 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| RG71_RS21940 () | 4194206..4194457 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| RG71_RS21945 () | 4194524..4194802 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| RG71_RS21950 () | 4194804..4195853 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| RG71_RS21955 () | 4195867..4196619 | + | 753 | WP_001047135.1 | antitermination protein | - |
| RG71_RS27430 () | 4196897..4196986 | - | 90 | WP_122985911.1 | hypothetical protein | - |
| RG71_RS21960 () | 4197041..4197253 | - | 213 | WP_024172454.1 | cold shock-like protein CspF | - |
| RG71_RS21965 () | 4197552..4197767 | + | 216 | WP_000066485.1 | cold shock-like protein CspB | - |
| RG71_RS27800 () | 4198131..4198301 | - | 171 | WP_001405948.1 | putative zinc-binding protein YnfU | - |
| RG71_RS21970 () | 4198520..4198734 | + | 215 | Protein_3917 | phage lysis protein EssD | - |
| RG71_RS21975 () | 4198739..4199050 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| RG71_RS21980 () | 4199047..4199580 | + | 534 | WP_001092971.1 | lysozyme | - |
| RG71_RS21985 () | 4199577..4200074 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| RG71_RS21990 () | 4200437..4200649 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| RG71_RS21995 () | 4200660..4200848 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| RG71_RS27435 () | 4200851..4200916 | + | 66 | WP_122985912.1 | hypothetical protein | - |
| RG71_RS22000 () | 4200996..4201151 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| RG71_RS22005 () | 4201323..4201496 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| RG71_RS22010 () | 4201648..4202058 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| RG71_RS22015 () | 4202116..4202289 | - | 174 | WP_001301001.1 | YlcI/YnfO family protein | - |
| RG71_RS22025 () | 4202371..4203533 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| RG71_RS22030 () | 4203607..4204197 | - | 591 | WP_000078178.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| RG71_RS22035 () | 4204514..4204747 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| RG71_RS27440 () | 4204816..4204929 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| RG71_RS22040 () | 4205533..4206816 | + | 1284 | Protein_3932 | MHS family MFS transporter YdfJ | - |
| RG71_RS22045 () | 4206905..4208365 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| RG71_RS22050 () | 4208400..4208603 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| RG71_RS22055 () | 4208780..4209466 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| RG71_RS22060 () | 4209555..4210301 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| RG71_RS22070 () | 4210438..4212483 | + | 2046 | WP_073528595.1 | peptidyl-dipeptidase Dcp | - |
| RG71_RS22080 () | 4212528..4213046 | - | 519 | WP_001400358.1 | 2-oxo-tetronate isomerase | - |
| RG71_RS22085 () | 4213325..4213717 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|