MGE detailed information
MGE type: Prophage MGE length: 48552 bp
Accession: NZ_CP010236 Location: 1236500..1285051 Organism: Escherichia coli strain S42 Replicon: chromosome
Accession: NZ_CP010236 Location: 1236500..1285051 Organism: Escherichia coli strain S42 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG70_RS26115 () | 1232489..1232536 | + | 48 | WP_211180494.1 | protein YnaN | - |
| RG70_RS06505 () | 1232550..1233533 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| RG70_RS06515 () | 1234011..1235384 | + | 1374 | WP_000123738.1 | ATP-dependent RNA helicase DbpA | - |
| RG70_RS06520 () | 1235513..1236448 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| RG70_RS06525 () | 1236500..1237735 | - | 1236 | WP_000040852.1 | Putative defective protein IntQ ; Integrase | Integrase |
| RG70_RS06530 () | 1237737..1237952 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| RG70_RS06535 () | 1238031..1238240 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 1238056..1238234 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1238056..1238234 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1238056..1238234 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1238056..1238234 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| RG70_RS06540 () | 1238233..1238427 | - | 195 | WP_053889809.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| RG70_RS06545 () | 1238484..1239293 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| RG70_RS06550 () | 1239286..1241886 | - | 2601 | WP_073520447.1 | exodeoxyribonuclease VIII | - |
| RG70_RS06555 () | 1241988..1242263 | - | 276 | WP_000632297.1 | protein RacC | - |
| RG70_RS06560 () | 1242338..1242508 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| RG70_RS06565 () | 1242508..1242729 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| RG70_RS06575 () | 1243171..1243659 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| RG70_RS06580 () | 1243656..1243811 | - | 156 | WP_001610067.1 | DUF1391 family protein | - |
| RG70_RS06590 () | 1244265..1244741 | - | 477 | WP_000948459.1 | DNA-binding transcriptional repressor RacR | - |
| RG70_RS06595 () | 1244865..1245161 | + | 297 | WP_000712069.1 | toxin YdaS | - |
| RG70_RS06600 () | 1245184..1245606 | + | 423 | WP_000693797.1 | phage protein | - |
| RG70_RS06605 () | 1245619..1246476 | + | 858 | WP_000899746.1 | DUF1376 domain-containing protein | - |
| RG70_RS06610 () | 1246483..1247229 | + | 747 | WP_042097776.1 | ATP-binding protein | - |
| RG70_RS06615 () | 1247252..1248001 | + | 750 | WP_042097778.1 | DUF1627 domain-containing protein | - |
| RG70_RS06620 () | 1248018..1248440 | + | 423 | WP_001586994.1 | DUF977 family protein | - |
| RG70_RS06625 () | 1248601..1249119 | + | 519 | WP_001586995.1 | hypothetical protein | - |
| RG70_RS06630 () | 1249150..1250583 | - | 1434 | WP_046788432.1 | hypothetical protein | - |
| RG70_RS06635 () | 1250555..1251613 | - | 1059 | WP_042097780.1 | nucleoid-associated protein | - |
| RG70_RS06640 () | 1251943..1252098 | + | 156 | WP_197731663.1 | type I toxin-antitoxin system Hok family toxin | - |
| RG70_RS06650 () | 1252562..1253161 | + | 600 | WP_000940319.1 | DUF1367 family protein | - |
| RG70_RS06655 () | 1253161..1253451 | + | 291 | WP_000247763.1 | DUF1364 domain-containing protein | - |
| RG70_RS06660 () | 1253448..1253990 | + | 543 | WP_000640161.1 | DUF1133 family protein | - |
| RG70_RS06665 () | 1255035..1255463 | + | 429 | WP_000506936.1 | cell envelope integrity protein TolA | - |
| RG70_RS06670 () | 1255635..1256009 | + | 375 | WP_001348108.1 | hypothetical protein | - |
| RG70_RS06675 () | 1256261..1256476 | + | 216 | WP_000839565.1 | phage lysis protein EssD | - |
| RG70_RS06680 () | 1256476..1256973 | + | 498 | WP_001135310.1 | lysozyme RrrD | - |
| RG70_RS25180 () | 1257190..1257375 | + | 186 | WP_001228688.1 | prophage lysis lipoprotein RzoD | - |
| RG70_RS06690 () | 1257572..1259029 | + | 1458 | WP_073520448.1 | Trk system potassium transporter TrkG | - |
| RG70_RS06700 () | 1259167..1259958 | + | 792 | WP_016232661.1 | ParB/Srx family N-terminal domain-containing protein | - |
| RG70_RS06705 () | 1259951..1260883 | + | 933 | WP_001742940.1 | hypothetical protein | - |
| RG70_RS06710 () | 1260819..1261070 | + | 252 | WP_000613571.1 | hypothetical protein | - |
| RG70_RS06715 () | 1261074..1262168 | + | 1095 | WP_073520449.1 | terminase small subunit | - |
| RG70_RS06720 () | 1262149..1263450 | + | 1302 | WP_000625348.1 | terminase family protein | - |
| RG70_RS06725 () | 1263453..1264859 | + | 1407 | WP_000763702.1 | DUF4055 domain-containing protein | - |
| RG70_RS06730 () | 1264843..1265955 | + | 1113 | WP_073520450.1 | hypothetical protein | - |
| RG70_RS06735 () | 1266060..1266824 | + | 765 | WP_000770042.1 | hypothetical protein | - |
| RG70_RS06740 () | 1266923..1268062 | + | 1140 | WP_000918487.1 | hypothetical protein | - |
| RG70_RS25975 () | 1268105..1268281 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| RG70_RS06745 () | 1268285..1268680 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| RG70_RS06750 () | 1268680..1269063 | + | 384 | WP_073520451.1 | glutamate 5-kinase | - |
| RG70_RS06755 () | 1269064..1269444 | + | 381 | WP_001029819.1 | hypothetical protein | - |
| RG70_RS06760 () | 1269441..1269833 | + | 393 | WP_000673077.1 | hypothetical protein | - |
| RG70_RS06765 () | 1269860..1270822 | + | 963 | WP_000094292.1 | hypothetical protein | - |
| RG70_RS06770 () | 1270973..1271332 | + | 360 | WP_012565075.1 | hypothetical protein | - |
| RG70_RS06775 () | 1271440..1271640 | + | 201 | WP_001755909.1 | hypothetical protein | - |
| RG70_RS06780 () | 1271806..1275039 | + | 3234 | WP_073520452.1 | phage tail tape measure protein | - |
| RG70_RS06785 () | 1275032..1275370 | + | 339 | WP_000024051.1 | phage tail protein | - |
| RG70_RS06790 () | 1275370..1276068 | + | 699 | WP_001152422.1 | phage minor tail protein L | - |
| RG70_RS06795 () | 1276074..1276817 | + | 744 | WP_073520453.1 | C40 family peptidase | - |
| RG70_RS06800 () | 1276715..1277362 | + | 648 | WP_021514630.1 | tail assembly protein | - |
| RG70_RS06805 () | 1277423..1280821 | + | 3399 | WP_073520454.1 | host specificity protein J | - |
| RG70_RS06810 () | 1280888..1281487 | + | 600 | WP_073520455.1 | Outer membrane protein X | VF |
| RG70_RS06815 () | 1281552..1284467 | + | 2916 | WP_073520568.1 | phage tail protein | - |
| RG70_RS06820 () | 1284467..1285051 | + | 585 | WP_073507386.1 | tail fiber assembly protein | - |
| RG70_RS06825 () | 1285264..1286121 | - | 858 | WP_000968131.1 | iron/manganese ABC transporter permease subunit SitD | - |
| RG70_RS06830 () | 1286118..1286975 | - | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| RG70_RS06835 () | 1286972..1287799 | - | 828 | WP_073507385.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| RG70_RS06840 () | 1287799..1288713 | - | 915 | WP_073507384.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
| RG70_RS06845 () | 1289298..1289732 | - | 435 | WP_001082294.1 | universal stress protein UspF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|