MGE detailed information
MGE type: Mobilizable plasmid MGE length: 117266 bp
Accession: NZ_CP010234 Location: 1..117266 Organism: Escherichia coli strain S30 Replicon: plasmid C
Accession: NZ_CP010234 Location: 1..117266 Organism: Escherichia coli strain S30 Replicon: plasmid C
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG68_RS26545 () | 246..650 | - | 405 | Protein_1 | recombinase family protein | - |
| RG68_RS26550 () | 818..3805 | + | 2988 | WP_000124023.1 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| RG68_RS29265 () | 3779..4069 | - | 291 | WP_072160577.1 | recombinase | - |
| RG68_RS26560 () | 4317..4628 | - | 312 | WP_038989442.1 | hypothetical protein | - |
| RG68_RS26565 () | 4679..5710 | - | 1032 | WP_038989443.1 | site-specific integrase | - |
| RG68_RS26570 () | 5718..5939 | - | 222 | WP_000542385.1 | hypothetical protein | - |
| RG68_RS28115 () | 6340..7038 | - | 699 | Protein_7 | IS1 family transposase IS1G | Transposase |
| RG68_RS26595 () | 7209..7418 | + | 210 | WP_073546712.1 | c1 repressor inactivator | - |
| RG68_RS26600 () | 7529..8380 | + | 852 | WP_073546713.1 | hypothetical protein | - |
| RG68_RS26605 () | 8413..8991 | - | 579 | Protein_10 | phage antirepressor KilAC domain-containing protein | - |
| RG68_RS28120 () | 9016..9714 | - | 699 | Protein_11 | IS1 family transposase IS1G | Transposase |
| RG68_RS26630 () | 9771..10688 | - | 918 | Protein_12 | DUF968 domain-containing protein | - |
| RG68_RS26635 () | 10716..10895 | - | 180 | WP_038997082.1 | hypothetical protein | - |
| RG68_RS26640 () | 10900..11280 | - | 381 | WP_073546715.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| RG68_RS26645 () | 11280..11501 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| RG68_RS26650 () | 11660..12727 | + | 1068 | Protein_16 | type I restriction-modification system subunit M | - |
| RG68_RS26655 () | 12724..13227 | + | 504 | Protein_17 | restriction endonuclease subunit S | - |
| RG68_RS28130 () | 13283..13981 | + | 699 | Protein_18 | IS1 family transposase IS1G | Transposase |
| RG68_RS26675 () | 13996..14790 | + | 795 | Protein_19 | restriction endonuclease subunit S | - |
| RG68_RS26680 () | 14912..18028 | + | 3117 | WP_073546716.1 | HsdR family type I site-specific deoxyribonuclease | - |
| RG68_RS26685 () | 18295..18801 | - | 507 | WP_001468756.1 | hypothetical protein | - |
| RG68_RS26690 () | 18874..20136 | - | 1263 | WP_000107690.1 | hypothetical protein | - |
| RG68_RS28140 () | 20671..21369 | + | 699 | Protein_23 | IS1 family transposase IS1G | Transposase |
| RG68_RS26735 () | 21384..21578 | - | 195 | Protein_24 | PerC family transcriptional regulator | - |
| RG68_RS26740 () | 21668..22402 | + | 735 | WP_000578338.1 | helix-turn-helix domain-containing protein | - |
| RG68_RS28145 () | 22525..23223 | - | 699 | Protein_26 | IS1 family transposase IS1G | Transposase |
| RG68_RS26765 () | 23537..23737 | - | 201 | WP_000896262.1 | DUF839 domain-containing protein | - |
| RG68_RS28150 () | 23727..23932 | + | 206 | Protein_28 | transposase | - |
| RG68_RS26785 () | 25443..28940 | - | 3498 | WP_073546722.1 | Outer membrane protein IcsA autotransporter | VF |
| RG68_RS26800 () | 30722..30967 | - | 246 | Protein_32 | IS91 family transposase ISEc37 | Transposase |
| RG68_RS26805 () | 31029..31469 | - | 441 | Protein_33 | IS3 family transposase ISKpn38 | Transposase |
| RG68_RS26815 () | 31534..32696 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| RG68_RS26820 () | 32726..33379 | - | 654 | Protein_35 | conjugal transfer protein TraF | - |
| RG68_RS26825 () | 33993..34504 | - | 512 | Protein_36 | hypothetical protein | - |
| RG68_RS26830 () | 34507..35292 | - | 786 | Protein_37 | trhR | - |
| RG68_RS26835 () | 36050..36535 | + | 486 | WP_072660833.1 | plasmid transfer protein | - |
| RG68_RS26840 () | 36532..37254 | + | 723 | WP_000133023.1 | hypothetical protein | - |
| RG68_RS26845 () | 37265..38554 | + | 1290 | Protein_40 | hypothetical protein | Relaxase |
| RG68_RS28160 () | 38610..39309 | + | 700 | Protein_41 | IS1 family transposase IS1X2 | Transposase |
| RG68_RS26865 () | 39353..39568 | - | 216 | Protein_42 | IS3 family transposase IS911 | Transposase |
| RG68_RS26870 () | 39636..40580 | + | 945 | Protein_43 | IS66 family transposase ISEc8 | Transposase |
| RG68_RS26875 () | 40819..42177 | - | 1359 | WP_063082219.1 | esterase-like activity of phytase family protein | - |
| RG68_RS28165 () | 42459..42590 | + | 132 | Protein_45 | IS3 family transposase | - |
| RG68_RS28180 () | 42885..43584 | + | 700 | Protein_46 | IS1 family transposase IS1X2 | Transposase |
| RG68_RS26910 () | 43727..44191 | + | 465 | WP_001352013.1 | helix-turn-helix domain-containing protein | - |
| RG68_RS26915 () | 44367..45239 | + | 873 | WP_000794337.1 | hypothetical protein | - |
| RG68_RS28190 () | 45398..46096 | - | 699 | Protein_49 | IS1 family transposase IS1G | Transposase |
| RG68_RS26940 () | 46495..47713 | - | 1219 | Protein_50 | IS3 family transposase | - |
| RG68_RS26955 () | 48111..48266 | + | 156 | WP_001352007.1 | type I toxin-antitoxin system toxin HokD | - |
| RG68_RS26965 () | 48460..49572 | - | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| RG68_RS26970 () | 49732..50241 | - | 510 | WP_073546725.1 | baseplate protein | - |
| RG68_RS26975 () | 50253..50834 | - | 582 | WP_000035250.1 | hypothetical protein | - |
| RG68_RS26980 () | 50870..51685 | - | 816 | WP_000041769.1 | hypothetical protein | - |
| RG68_RS26985 () | 51695..53284 | - | 1590 | WP_073546726.1 | hypothetical protein | - |
| RG68_RS26990 () | 53344..55050 | - | 1707 | WP_073546727.1 | hypothetical protein | - |
| RG68_RS26995 () | 55276..56277 | - | 1002 | WP_000038866.1 | ParB/RepB/Spo0J family partition protein | - |
| RG68_RS27000 () | 56294..57490 | - | 1197 | WP_001285362.1 | AAA family ATPase | - |
| RG68_RS27005 () | 57659..58468 | - | 810 | WP_001154687.1 | GIY-YIG nuclease family protein | - |
| RG68_RS27010 () | 58761..59645 | - | 885 | WP_001113742.1 | RepB family plasmid replication initiator protein | - |
| RG68_RS27015 () | 59981..60373 | - | 393 | WP_001281115.1 | hypothetical protein | - |
| RG68_RS29085 () | 60383..60523 | - | 141 | WP_000336812.1 | hypothetical protein | - |
| RG68_RS29090 () | 60549..60704 | - | 156 | Protein_64 | ppfA | - |
| RG68_RS27025 () | 60876..62075 | - | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| RG68_RS27035 () | 62177..62386 | + | 210 | Protein_66 | hypothetical protein | - |
| RG68_RS27040 () | 62418..62657 | - | 240 | WP_050858643.1 | hypothetical protein | - |
| RG68_RS27045 () | 62707..63963 | - | 1257 | WP_050858642.1 | tyrosine-type recombinase/integrase | - |
| RG68_RS27050 () | 64330..65598 | + | 1269 | WP_073546728.1 | integrase arm-type DNA-binding domain-containing protein | - |
| RG68_RS27055 () | 66182..66787 | + | 606 | WP_001445807.1 | DUF1819 family protein | - |
| RG68_RS27060 () | 66784..67386 | + | 603 | WP_000999546.1 | DUF1788 domain-containing protein | - |
| RG68_RS27065 () | 67399..71013 | + | 3615 | WP_050858669.1 | BREX system P-loop protein BrxC | - |
| RG68_RS27070 () | 71062..74709 | + | 3648 | WP_050858670.1 | BREX-1 system adenine-specific DNA-methyltransferase PglX | - |
| RG68_RS27075 () | 74709..75830 | + | 1122 | WP_050858671.1 | AAA family ATPase | - |
| RG68_RS27080 () | 75824..76393 | + | 570 | WP_050858672.1 | hypothetical protein | - |
| RG68_RS27085 () | 76393..78990 | + | 2598 | WP_050858673.1 | BREX-1 system phosphatase PglZ type A | - |
| RG68_RS27090 () | 79001..81076 | + | 2076 | WP_001187275.1 | protease Lon-related BREX system protein BrxL | - |
| RG68_RS28200 () | 81390..82495 | - | 1106 | Protein_78 | IS3 family transposase | - |
| RG68_RS27120 () | 83061..84029 | - | 969 | WP_162780438.1 | IS5 family transposase IS903B | Transposase |
| RG68_RS27130 () | 84112..84816 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| RG68_RS29270 () | 84880..85002 | + | 123 | Protein_81 | IS66 family insertion sequence element accessory protein TnpB | - |
| RG68_RS27140 () | 85094..85875 | - | 782 | Protein_82 | IS21 family transposase IS100kyp | Transposase |
| RG68_RS27145 () | 85872..86480 | - | 609 | Protein_83 | IS21 family transposase IS100kyp | Transposase |
| RG68_RS28205 () | 86494..86866 | - | 373 | Protein_84 | IS1 family transposase | - |
| RG68_RS28210 () | 87193..87891 | - | 699 | Protein_85 | IS1 family transposase IS1G | Transposase |
| RG68_RS27185 () | 87972..90077 | + | 2106 | WP_073546730.1 | UDP-forming cellulose synthase catalytic subunit | - |
| RG68_RS27190 () | 90141..92291 | + | 2151 | WP_001351999.1 | cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB | - |
| RG68_RS27205 () | 93401..93787 | + | 387 | Protein_88 | IS200-IS605 family transposase IS200C | Transposase |
| RG68_RS27215 () | 94254..97727 | + | 3474 | WP_073546731.1 | cellulose biosynthesis protein BcsC | - |
| RG68_RS28225 () | 99673..101168 | - | 1496 | Protein_91 | IS66 family transposase ISSgsp1 | Transposase |
| RG68_RS27250 () | 101218..101565 | - | 348 | WP_000609174.1 | IS66 family transposase ISCfr14 | Transposase |
| RG68_RS27255 () | 101562..101945 | - | 384 | WP_032182229.1 | IS66 family transposase IS682 | Transposase |
| RG68_RS28230 () | 102025..102264 | - | 240 | Protein_94 | helix-turn-helix transcriptional regulator | - |
| RG68_RS27265 () | 102331..103441 | - | 1111 | Protein_95 | IS3 family transposase | - |
| RG68_RS29095 () | 103524..103664 | + | 141 | WP_152930419.1 | hypothetical protein | - |
| RG68_RS27295 () | 104104..104801 | + | 698 | Protein_97 | IS1 family transposase IS1R | Transposase |
| RG68_RS27300 () | 104858..105145 | - | 288 | WP_000222771.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| RG68_RS27305 () | 105142..105393 | - | 252 | WP_001139206.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| RG68_RS27320 () | 106006..109944 | + | 3939 | WP_073546735.1 | helicase | - |
| RG68_RS27325 () | 109978..110418 | + | 441 | WP_073546736.1 | peptide-binding protein | - |
| RG68_RS27330 () | 110415..110663 | + | 249 | WP_000747846.1 | hypothetical protein | - |
| RG68_RS27335 () | 110702..111423 | - | 722 | Protein_103 | helix-turn-helix domain-containing protein | - |
| RG68_RS27340 () | 111658..112347 | + | 690 | WP_000452096.1 | EAL domain-containing protein | - |
| RG68_RS27345 () | 112401..113045 | - | 645 | WP_073546737.1 | maturation control protein | - |
| RG68_RS27350 () | 113234..113620 | - | 387 | WP_073546738.1 | Ref family protein | - |
| RG68_RS27355 () | 113839..114615 | + | 777 | WP_000691857.1 | MBL fold metallo-hydrolase | - |
| RG68_RS27360 () | 114631..115620 | + | 990 | WP_073546739.1 | HTH-type transcriptional regulator CdhR | VF |
| RG68_RS27365 () | 115629..116030 | + | 402 | Protein_109 | ester cyclase | - |
| RG68_RS27370 () | 116137..116774 | - | 638 | Protein_110 | recombinase family protein | - |
| RG68_RS28790 () | 116823..116930 | + | 108 | WP_071595431.1 | Tn3 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|