MGE detailed information
MGE type: Genomic_island MGE length: 43008 bp
Accession: NZ_CP010231 Location: 3795077..3838084 Organism: Escherichia coli strain S30 Replicon: chromosome
Accession: NZ_CP010231 Location: 3795077..3838084 Organism: Escherichia coli strain S30 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG68_RS19800 () | 3790399..3791139 | - | 741 | WP_001477155.1 | porin family protein | - |
| RG68_RS19805 () | 3791369..3791545 | + | 177 | Protein_3540 | integrase | - |
| RG68_RS27810 () | 3791562..3792261 | - | 700 | Protein_3541 | IS1 family transposase | - |
| RG68_RS19825 () | 3792534..3793031 | + | 498 | WP_000648433.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| RG68_RS19830 () | 3793098..3795077 | + | 1980 | WP_001053122.1 | type I restriction-modification system subunit M | - |
| RG68_RS19835 () | 3795077..3796363 | + | 1287 | WP_000991122.1 | restriction endonuclease subunit S | - |
| RG68_RS19840 () | 3796363..3799599 | + | 3237 | WP_000718842.1 | type I restriction endonuclease subunit R | - |
| RG68_RS19845 () | 3799599..3800153 | + | 555 | WP_001090220.1 | hypothetical protein | - |
| RG68_RS19850 () | 3800156..3800995 | + | 840 | WP_000350135.1 | hypothetical protein | - |
| RG68_RS19855 () | 3801031..3802065 | + | 1035 | WP_000774671.1 | virulence RhuM family protein | - |
| RG68_RS19860 () | 3802123..3802509 | - | 387 | WP_001342709.1 | hypothetical protein | - |
| RG68_RS19865 () | 3802599..3802799 | - | 201 | WP_012311738.1 | hypothetical protein | - |
| RG68_RS27815 () | 3802908..3804498 | + | 1591 | Protein_3551 | IS3 family transposase | - |
| RG68_RS19890 () | 3804633..3805256 | - | 624 | WP_001470157.1 | hypothetical protein | - |
| RG68_RS19900 () | 3805439..3806651 | - | 1213 | Protein_3553 | IS3 family transposase | - |
| RG68_RS28540 () | 3806711..3807201 | - | 491 | Protein_3554 | transposase | - |
| RG68_RS19920 () | 3807288..3808271 | - | 984 | WP_000074845.1 | DUF4868 domain-containing protein | - |
| RG68_RS19925 () | 3808281..3808883 | - | 603 | WP_001204062.1 | hypothetical protein | - |
| RG68_RS19935 () | 3809479..3809991 | - | 513 | WP_001167442.1 | hypothetical protein | - |
| RG68_RS19940 () | 3810248..3810481 | - | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| RG68_RS19945 () | 3810550..3811125 | - | 576 | WP_000991596.1 | hypothetical protein | - |
| RG68_RS19950 () | 3811372..3811938 | - | 567 | WP_001126809.1 | inovirus-type Gp2 protein | - |
| RG68_RS27820 () | 3813102..3813451 | + | 350 | Protein_3561 | transposase | - |
| RG68_RS19970 () | 3813481..3813609 | - | 129 | Protein_3562 | IS256 family transposase | - |
| RG68_RS19975 () | 3813877..3814317 | - | 441 | WP_000038139.1 | H-NS histone family protein | - |
| RG68_RS27825 () | 3814538..3815313 | + | 776 | Protein_3564 | DDE-type integrase/transposase/recombinase | - |
| RG68_RS19995 () | 3815446..3816020 | - | 575 | Protein_3565 | transposase | - |
| RG68_RS20000 () | 3816074..3816952 | - | 879 | WP_000769116.1 | restriction endonuclease | - |
| RG68_RS20005 () | 3817280..3818011 | - | 732 | WP_001075464.1 | inovirus Gp2 family protein | - |
| RG68_RS20015 () | 3819490..3820620 | - | 1131 | WP_047928958.1 | hypothetical protein | - |
| RG68_RS20020 () | 3820805..3821689 | + | 885 | WP_000010408.1 | 50S ribosome-binding GTPase | - |
| RG68_RS20030 () | 3821892..3822572 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| RG68_RS20035 () | 3822720..3823397 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| RG68_RS20040 () | 3823427..3823636 | + | 210 | WP_032150870.1 | DUF905 family protein | - |
| RG68_RS20045 () | 3823726..3824544 | + | 819 | WP_001175175.1 | DUF945 domain-containing protein | - |
| RG68_RS20050 () | 3824636..3825121 | + | 486 | WP_000213722.1 | antirestriction protein | - |
| RG68_RS20055 () | 3825136..3825612 | + | 477 | WP_001384029.1 | RadC family protein | - |
| RG68_RS20060 () | 3825699..3825920 | + | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| RG68_RS20065 () | 3826000..3826368 | + | 369 | WP_001285607.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| RG68_RS20070 () | 3826458..3826835 | + | 378 | WP_001094444.1 | TA system toxin CbtA family protein | Toxin Detail |
| RG68_RS20075 () | 3826832..3827185 | + | 354 | Protein_3579 | hypothetical protein | - |
| RG68_RS20090 () | 3828601..3828798 | + | 198 | WP_001327226.1 | DUF957 domain-containing protein | - |
| RG68_RS29175 () | 3828883..3829029 | + | 147 | WP_001290178.1 | hypothetical protein | - |
| RG68_RS20105 () | 3830074..3830724 | + | 651 | WP_001037966.1 | HNH endonuclease | - |
| RG68_RS20110 () | 3830732..3831712 | - | 981 | WP_001295601.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| RG68_RS20115 () | 3831777..3832883 | - | 1107 | WP_001353974.1 | N-acetylneuraminate epimerase | - |
| RG68_RS20120 () | 3832903..3833619 | - | 717 | WP_001360088.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| RG68_RS20135 () | 3833810..3835038 | + | 1229 | WP_181040866.1 | IS3 family transposase | - |
| RG68_RS20145 () | 3836409..3837011 | + | 603 | WP_073546630.1 | type 1 fimbria switch DNA invertase FimB | - |
| RG68_RS20150 () | 3837488..3838084 | + | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| RG68_RS20160 () | 3838566..3839120 | + | 555 | WP_000695589.1 | type 1 fimbrial major subunit FimA | - |
| RG68_RS20165 () | 3839185..3839724 | + | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| RG68_RS20170 () | 3839761..3840486 | + | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|