MGE detailed information
MGE type: Prophage MGE length: 61047 bp
Accession: NZ_CP010230 Location: 844526..905572 Organism: Escherichia coli strain S21 Replicon: chromosome
Accession: NZ_CP010230 Location: 844526..905572 Organism: Escherichia coli strain S21 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG67_RS04470 () | 840045..840797 | - | 753 | WP_000611911.1 | fumarate/nitrate reduction transcriptional regulator Fnr | - |
| RG67_RS04475 () | 840992..841507 | - | 516 | WP_000945005.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| RG67_RS04480 () | 841518..843044 | - | 1527 | WP_000062967.1 | p-aminobenzoyl-glutamate transporter | - |
| RG67_RS04490 () | 843081..844526 | - | 1446 | WP_073508608.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| RG67_RS04495 () | 844526..845836 | - | 1311 | WP_000444949.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| RG67_RS04500 () | 846012..846920 | + | 909 | WP_000143913.1 | LysR family transcriptional regulator | - |
| RG67_RS04505 () | 847250..847813 | + | 564 | WP_001046821.1 | DNA endonuclease SmrA | - |
| RG67_RS04510 () | 847834..849066 | - | 1233 | WP_001307164.1 | diguanylate cyclase DgcM | - |
| RG67_RS25410 () | 849260..849307 | + | 48 | WP_211180494.1 | protein YnaN | - |
| RG67_RS04515 () | 849321..850304 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| RG67_RS04525 () | 850782..852155 | + | 1374 | WP_000123763.1 | ATP-dependent RNA helicase DbpA | - |
| RG67_RS04530 () | 852284..853219 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| RG67_RS04535 () | 853271..854506 | - | 1236 | WP_073508607.1 | hypothetical protein ; Integrase | Integrase |
| RG67_RS04540 () | 854508..854723 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| RG67_RS04545 () | 854802..855011 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 854827..855005 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 854827..855005 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 854827..855005 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 854827..855005 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| RG67_RS04550 () | 855004..855198 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| RG67_RS04555 () | 855255..856064 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| RG67_RS04560 () | 856057..858648 | - | 2592 | WP_000105142.1 | exodeoxyribonuclease VIII | - |
| RG67_RS04565 () | 858750..859025 | - | 276 | WP_000632297.1 | protein RacC | - |
| RG67_RS04570 () | 859100..859270 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| RG67_RS04575 () | 859270..859491 | - | 222 | WP_000560225.1 | killing protein KilR | - |
| RG67_RS04585 () | 859933..860421 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| RG67_RS04590 () | 860418..860573 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| RG67_RS04600 () | 860973..861392 | - | 420 | WP_000362155.1 | hypothetical protein | - |
| RG67_RS04605 () | 861493..861774 | + | 282 | WP_000391949.1 | helix-turn-helix domain-containing protein | - |
| RG67_RS04610 () | 861758..862183 | + | 426 | WP_000693836.1 | Rha family transcriptional regulator | - |
| RG67_RS04615 () | 862255..863325 | + | 1071 | WP_001262352.1 | hypothetical protein | - |
| RG67_RS04620 () | 863366..863788 | + | 423 | WP_001151151.1 | DUF977 family protein | - |
| RG67_RS04625 () | 864129..866126 | + | 1998 | WP_001676522.1 | choline BCCT transporter BetT | - |
| RG67_RS04635 () | 866190..867467 | + | 1278 | WP_000625667.1 | DUF2254 domain-containing protein | - |
| RG67_RS04640 () | 867598..868479 | - | 882 | WP_000019009.1 | LysR family transcriptional regulator | - |
| RG67_RS04645 () | 868476..869168 | - | 693 | WP_000957772.1 | gamma-glutamylcyclotransferase | - |
| RG67_RS04650 () | 869180..870379 | - | 1200 | WP_001634983.1 | MFS transporter | - |
| RG67_RS04655 () | 871103..871441 | - | 339 | WP_000149055.1 | DUF1971 domain-containing protein | - |
| RG67_RS04660 () | 872255..872854 | + | 600 | WP_000940319.1 | DUF1367 family protein | - |
| RG67_RS04665 () | 872854..873144 | + | 291 | WP_000247763.1 | DUF1364 domain-containing protein | - |
| RG67_RS04670 () | 873141..873683 | + | 543 | WP_000640161.1 | DUF1133 family protein | - |
| RG67_RS04675 () | 874728..875156 | + | 429 | WP_000506936.1 | cell envelope integrity protein TolA | - |
| RG67_RS04680 () | 875328..875702 | + | 375 | WP_001348108.1 | hypothetical protein | - |
| RG67_RS04685 () | 875954..876169 | + | 216 | WP_000839565.1 | phage lysis protein EssD | - |
| RG67_RS04690 () | 876169..876666 | + | 498 | WP_001135310.1 | lysozyme RrrD | - |
| RG67_RS24480 () | 876883..877068 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| RG67_RS04700 () | 877265..878722 | + | 1458 | WP_001703139.1 | Trk system potassium transporter TrkG | - |
| RG67_RS04710 () | 878860..879648 | + | 789 | WP_073508446.1 | ParB/Srx family N-terminal domain-containing protein | - |
| RG67_RS04715 () | 879641..880573 | + | 933 | WP_001204033.1 | hypothetical protein | - |
| RG67_RS04720 () | 880509..880760 | + | 252 | WP_172903414.1 | hypothetical protein | - |
| RG67_RS04725 () | 880764..881858 | + | 1095 | WP_032085165.1 | terminase small subunit | - |
| RG67_RS04730 () | 881839..883140 | + | 1302 | WP_000625348.1 | terminase family protein | - |
| RG67_RS04735 () | 883143..884549 | + | 1407 | WP_000763702.1 | DUF4055 domain-containing protein | - |
| RG67_RS04740 () | 884533..885645 | + | 1113 | WP_073508444.1 | hypothetical protein | - |
| RG67_RS04745 () | 885750..886514 | + | 765 | WP_073508443.1 | hypothetical protein | - |
| RG67_RS04750 () | 886613..887752 | + | 1140 | WP_073508606.1 | P22 coat - protein 5 family protein | - |
| RG67_RS04755 () | 887968..888363 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| RG67_RS04760 () | 888363..888746 | + | 384 | WP_000524260.1 | hypothetical protein | - |
| RG67_RS04765 () | 888747..889127 | + | 381 | WP_001029815.1 | hypothetical protein | - |
| RG67_RS04770 () | 889124..889516 | + | 393 | WP_000144678.1 | hypothetical protein | - |
| RG67_RS04775 () | 889543..890505 | + | 963 | WP_029488565.1 | hypothetical protein | - |
| RG67_RS04780 () | 890656..891015 | + | 360 | WP_012565075.1 | hypothetical protein | - |
| RG67_RS04790 () | 891489..894722 | + | 3234 | WP_073508605.1 | phage tail tape measure protein | - |
| RG67_RS04795 () | 894715..895053 | + | 339 | WP_000024051.1 | phage tail protein | - |
| RG67_RS04800 () | 895053..895751 | + | 699 | WP_001152434.1 | phage minor tail protein L | - |
| RG67_RS04805 () | 895757..896500 | + | 744 | WP_073508441.1 | C40 family peptidase | - |
| RG67_RS04810 () | 896398..897045 | + | 648 | WP_000741591.1 | tail assembly protein | - |
| RG67_RS04815 () | 897106..900504 | + | 3399 | WP_073508604.1 | host specificity protein J | - |
| RG67_RS04820 () | 900571..901170 | + | 600 | WP_023909745.1 | hypothetical protein | VF |
| RG67_RS04825 () | 901235..904309 | + | 3075 | WP_073508439.1 | phage tail protein | - |
| RG67_RS04830 () | 904309..904884 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| RG67_RS04835 () | 904982..905572 | - | 591 | WP_073508603.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| RG67_RS04840 () | 905889..906122 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| RG67_RS24890 () | 906191..906304 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| RG67_RS04845 () | 907081..907515 | - | 435 | WP_001082294.1 | universal stress protein UspF | - |
| RG67_RS04850 () | 907656..908789 | - | 1134 | WP_000837924.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|