MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP010230 Location: 3842987..3852338 Organism: Escherichia coli strain S21 Replicon: chromosome
Accession: NZ_CP010230 Location: 3842987..3852338 Organism: Escherichia coli strain S21 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG67_RS19875 () | 3839718..3840437 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| RG67_RS19880 () | 3840434..3842065 | - | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| RG67_RS19885 () | 3842246..3842476 | + | 231 | WP_000371700.1 | (4Fe-4S)-binding protein | - |
| RG67_RS19890 () | 3842488..3842760 | + | 273 | WP_000405649.1 | N-acetyltransferase | - |
| RG67_RS19900 () | 3842987..3843283 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| RG67_RS19905 () | 3843311..3843484 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| RG67_RS19910 () | 3843603..3845120 | - | 1518 | WP_001295087.1 | lysine--tRNA ligase | - |
| RG67_RS19915 () | 3845357..3846814 | - | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| RG67_RS19920 () | 3846873..3849020 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| RG67_RS19925 () | 3849100..3850434 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| RG67_RS19935 () | 3850800..3852338 | - | 1539 | WP_001187182.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| RG67_RS19950 () | 3853137..3853712 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| RG67_RS19955 () | 3853749..3855446 | - | 1698 | WP_032217380.1 | protein-disulfide reductase DsbD | - |
| RG67_RS19960 () | 3855422..3855760 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| RG67_RS19965 () | 3855876..3857177 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.007 |