MGE detailed information
MGE type: Prophage MGE length: 61255 bp
Accession: NZ_CP010221 Location: 1365932..1427186 Organism: Escherichia coli strain M19 Replicon: chromosome
Accession: NZ_CP010221 Location: 1365932..1427186 Organism: Escherichia coli strain M19 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG63_RS06920 () | 1362016..1362657 | + | 642 | WP_000800523.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| RG63_RS06925 () | 1362713..1363891 | - | 1179 | WP_000173491.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| RG63_RS06930 () | 1364025..1364315 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| RG63_RS06935 () | 1364382..1364738 | + | 357 | WP_001295500.1 | protein YebF | - |
| RG63_RS06950 () | 1365064..1365723 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| RG63_RS06960 () | 1365932..1367992 | + | 2061 | WP_000936956.1 | oligopeptidase B | - |
| RG63_RS06965 () | 1367989..1368651 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| RG63_RS06970 () | 1368675..1369331 | - | 657 | WP_000011652.1 | carbon-nitrogen hydrolase family protein | - |
| RG63_RS06975 () | 1369433..1369663 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| RG63_RS06980 () | 1369802..1370176 | + | 375 | WP_000204699.1 | CopC domain-containing protein YobA | - |
| RG63_RS06985 () | 1370180..1371052 | + | 873 | WP_000879280.1 | copper homeostasis membrane protein CopD | - |
| RG63_RS06990 () | 1371065..1371406 | + | 342 | WP_000976492.1 | YebY family protein | - |
| RG63_RS07000 () | 1371799..1372875 | - | 1077 | WP_001189091.1 | hypothetical protein ; Integrase | Integrase |
| RG63_RS07005 () | 1372841..1373122 | - | 282 | WP_001311878.1 | excisionase | - |
| RG63_RS07010 () | 1373229..1373417 | - | 189 | WP_001356607.1 | DUF1187 family protein | - |
| - () | 1373233..1373411 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1373233..1373411 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1373233..1373411 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1373233..1373411 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| RG63_RS07015 () | 1373410..1373604 | - | 195 | WP_042853000.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| RG63_RS07020 () | 1373661..1374470 | - | 810 | WP_000166317.1 | recombination protein RecT | - |
| RG63_RS07025 () | 1374463..1377096 | - | 2634 | WP_021527613.1 | exodeoxyribonuclease VIII | - |
| RG63_RS07030 () | 1377195..1377470 | - | 276 | WP_001452559.1 | hypothetical protein | - |
| RG63_RS07035 () | 1377545..1377721 | - | 177 | WP_000245528.1 | hypothetical protein | - |
| RG63_RS07040 () | 1377715..1377936 | - | 222 | WP_073519610.1 | cell division protein FtsZ | - |
| RG63_RS07050 () | 1378466..1378660 | + | 195 | WP_001419881.1 | hypothetical protein | - |
| RG63_RS07055 () | 1378626..1378844 | - | 219 | WP_000232638.1 | hypothetical protein | - |
| RG63_RS07060 () | 1379144..1379563 | - | 420 | WP_000410105.1 | helix-turn-helix domain-containing protein | - |
| RG63_RS07065 () | 1379660..1379902 | + | 243 | WP_001033914.1 | helix-turn-helix domain-containing protein | - |
| RG63_RS07070 () | 1379899..1380321 | + | 423 | WP_000702025.1 | hypothetical protein | - |
| RG63_RS07075 () | 1380399..1381529 | + | 1131 | WP_073519611.1 | hypothetical protein | - |
| RG63_RS07080 () | 1381536..1382282 | + | 747 | WP_073519612.1 | IS21 family transposase ISCsa9 | Transposase |
| RG63_RS07085 () | 1382305..1383066 | + | 762 | WP_073519613.1 | DUF1627 domain-containing protein | - |
| RG63_RS07090 () | 1383082..1383504 | + | 423 | WP_073519614.1 | DUF977 family protein | - |
| RG63_RS07095 () | 1383501..1383701 | + | 201 | WP_073519615.1 | hypothetical protein | - |
| RG63_RS28795 () | 1384223..1384480 | + | 258 | WP_073528026.1 | DUF4014 family protein | - |
| RG63_RS07110 () | 1384585..1385604 | + | 1020 | WP_073519448.1 | IS110 family transposase ISEc11 | Transposase |
| RG63_RS07115 () | 1385885..1386403 | + | 519 | WP_073519617.1 | DUF551 domain-containing protein | - |
| RG63_RS07120 () | 1386400..1386795 | + | 396 | WP_073519618.1 | hypothetical protein | - |
| RG63_RS07125 () | 1387086..1387241 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| RG63_RS07130 () | 1387450..1387629 | + | 180 | WP_000119355.1 | hypothetical protein | - |
| RG63_RS07135 () | 1387648..1388133 | + | 486 | WP_000818163.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| RG63_RS28805 () | 1388357..1388569 | + | 213 | WP_000411312.1 | hypothetical protein | - |
| RG63_RS07150 () | 1388641..1389240 | + | 600 | WP_061892354.1 | DUF1367 family protein | - |
| RG63_RS07155 () | 1389240..1389530 | + | 291 | WP_073519620.1 | DUF1364 domain-containing protein | - |
| RG63_RS07160 () | 1389527..1390069 | + | 543 | WP_073519621.1 | DUF1133 family protein | - |
| RG63_RS07185 () | 1391644..1392072 | + | 429 | WP_073519622.1 | cell envelope integrity protein TolA | - |
| RG63_RS07190 () | 1392881..1393459 | + | 579 | Protein_1301 | DUF1737 domain-containing protein | - |
| RG63_RS07195 () | 1393539..1393844 | + | 306 | WP_064768310.1 | DUF826 domain-containing protein | - |
| RG63_RS07200 () | 1393922..1394137 | + | 216 | WP_000284506.1 | class II holin family protein | - |
| RG63_RS07205 () | 1394141..1394692 | + | 552 | WP_073519623.1 | YdfR family protein | - |
| RG63_RS07210 () | 1394640..1394900 | - | 261 | WP_073519624.1 | hypothetical protein | - |
| RG63_RS07215 () | 1395015..1395548 | + | 534 | WP_061892325.1 | lysozyme | - |
| RG63_RS07220 () | 1395545..1396012 | + | 468 | WP_061892324.1 | lysis protein | - |
| RG63_RS07225 () | 1396000..1396152 | + | 153 | WP_061892323.1 | hypothetical protein | - |
| RG63_RS07230 () | 1396464..1396856 | - | 393 | WP_073528025.1 | DUF1398 family protein | - |
| RG63_RS07240 () | 1397572..1398120 | + | 549 | WP_061892169.1 | terminase small subunit | - |
| RG63_RS07245 () | 1398092..1400020 | + | 1929 | WP_073519627.1 | phage terminase large subunit family protein | - |
| RG63_RS07250 () | 1400004..1400207 | + | 204 | WP_061892171.1 | phage tail protein | - |
| RG63_RS07255 () | 1400204..1401796 | + | 1593 | WP_061892172.1 | phage portal protein | - |
| RG63_RS07260 () | 1401786..1403291 | + | 1506 | WP_073519628.1 | S49 family peptidase | - |
| RG63_RS07265 () | 1403328..1403675 | + | 348 | WP_061892174.1 | head decoration protein | - |
| RG63_RS07270 () | 1403733..1404761 | + | 1029 | WP_073519629.1 | major capsid protein | - |
| RG63_RS07275 () | 1404814..1405194 | + | 381 | WP_061892713.1 | DNA-packaging protein FI | - |
| RG63_RS07280 () | 1405206..1405559 | + | 354 | WP_073519630.1 | head-tail joining protein | - |
| RG63_RS07285 () | 1405571..1406146 | + | 576 | WP_061892715.1 | phage tail protein | - |
| RG63_RS07290 () | 1406143..1406538 | + | 396 | WP_061892716.1 | phage minor tail U family protein | - |
| RG63_RS07295 () | 1406546..1407286 | + | 741 | WP_061892718.1 | phage tail protein | - |
| RG63_RS07300 () | 1407302..1407724 | + | 423 | WP_053294703.1 | phage minor tail protein G | - |
| RG63_RS07305 () | 1407706..1408140 | + | 435 | WP_073519631.1 | phage tail assembly protein T | - |
| RG63_RS07310 () | 1408133..1410712 | + | 2580 | WP_073519632.1 | phage tail tape measure protein | - |
| RG63_RS07315 () | 1410709..1411038 | + | 330 | WP_021528540.1 | phage tail protein | - |
| RG63_RS07320 () | 1411038..1411736 | + | 699 | WP_001152619.1 | phage minor tail protein L | - |
| RG63_RS07325 () | 1411742..1412485 | + | 744 | WP_073519633.1 | C40 family peptidase | - |
| RG63_RS07330 () | 1412422..1413055 | + | 634 | Protein_1328 | tail assembly protein | - |
| RG63_RS07335 () | 1413116..1416529 | + | 3414 | WP_073521376.1 | host specificity protein J | - |
| RG63_RS07340 () | 1416600..1417199 | + | 600 | WP_001233071.1 | Outer membrane protein X | VF |
| RG63_RS28090 () | 1417264..1418433 | + | 1170 | WP_077898616.1 | ISNCY family transposase KIS | Transposase |
| RG63_RS07360 () | 1418417..1418983 | + | 567 | WP_077897937.1 | DUF4376 domain-containing protein | - |
| RG63_RS07365 () | 1418976..1419359 | + | 384 | WP_061892726.1 | DUF1353 domain-containing protein | - |
| RG63_RS07370 () | 1419645..1419827 | + | 183 | WP_077897940.1 | DUF1353 domain-containing protein | - |
| RG63_RS07375 () | 1421727..1422383 | + | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| RG63_RS07380 () | 1422384..1422575 | - | 192 | WP_001296140.1 | YebW family protein | - |
| RG63_RS07385 () | 1422680..1422916 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| RG63_RS07390 () | 1423034..1424473 | - | 1440 | WP_000057022.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| RG63_RS07395 () | 1424553..1427186 | - | 2634 | WP_001299674.1 | hypothetical protein | VF |
| RG63_RS07400 () | 1427155..1428438 | - | 1284 | WP_001207284.1 | membrane integrity lipid transport subunit YebS | - |
| RG63_RS07405 () | 1428568..1429065 | + | 498 | WP_073519635.1 | L-methionine (R)-S-oxide reductase | - |
| RG63_RS07410 () | 1429162..1429860 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| RG63_RS07415 () | 1429880..1431928 | + | 2049 | WP_001326055.1 | carboxy terminal-processing peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|