MGE detailed information
MGE type: Mobilizable plasmid MGE length: 57582 bp
Accession: NZ_CP010220 Location: 1..57582 Organism: Escherichia coli strain M18 Replicon: plasmid A
Accession: NZ_CP010220 Location: 1..57582 Organism: Escherichia coli strain M18 Replicon: plasmid A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG62_RS26850 () | 1048..1683 | - | 636 | WP_000934979.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| RG62_RS26855 () | 1687..2169 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| RG62_RS26860 () | 2236..2793 | - | 558 | WP_000095049.1 | hypothetical protein | - |
| RG62_RS26865 () | 2838..3947 | - | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| RG62_RS26870 () | 3938..5476 | - | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| RG62_RS26875 () | 5501..5995 | - | 495 | WP_000912553.1 | hypothetical protein | VF |
| RG62_RS26880 () | 5979..7301 | - | 1323 | WP_000454142.1 | type 4b pilus protein PilO2 | - |
| RG62_RS26885 () | 7340..8983 | - | 1644 | WP_001035589.1 | Outer membrane lipoprotein BfpB | VF |
| RG62_RS26890 () | 8976..9506 | - | 531 | WP_001220542.1 | sigma 54-interacting transcriptional regulator | - |
| RG62_RS26895 () | 9553..11511 | - | 1959 | WP_000338976.1 | type IV secretory system conjugative DNA transfer family protein | - |
| RG62_RS26900 () | 11527..12582 | - | 1056 | WP_001542006.1 | Type IV secretion system protein VirB11 | VF |
| RG62_RS26905 () | 12601..13740 | - | 1140 | WP_001542008.1 | Type IV secretion system protein virB10 | VF |
| RG62_RS26910 () | 13730..14431 | - | 702 | WP_049824867.1 | Type IV secretion system protein PtlF | VF |
| RG62_RS26915 () | 14497..15231 | - | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| RG62_RS26920 () | 15231..15365 | - | 135 | WP_000701233.1 | hypothetical protein | - |
| RG62_RS26925 () | 15397..17754 | - | 2358 | WP_000548950.1 | VirB4 family type IV secretion system protein | - |
| RG62_RS26930 () | 17760..18080 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| RG62_RS27680 () | 18151..18339 | - | 189 | WP_050567133.1 | hypothetical protein | - |
| RG62_RS26940 () | 18441..19025 | - | 585 | WP_001177117.1 | Type IV secretion system protein virB1 | VF |
| RG62_RS26945 () | 19046..19444 | - | 399 | WP_001153669.1 | hypothetical protein | - |
| RG62_RS26950 () | 19563..20000 | - | 438 | WP_000539665.1 | type IV pilus biogenesis protein PilM | - |
| RG62_RS26955 () | 20006..21241 | - | 1236 | WP_000733394.1 | hypothetical protein | VF |
| RG62_RS26960 () | 21244..21543 | - | 300 | WP_000835763.1 | IncN plasmid KikA protein | - |
| RG62_RS26965 () | 21591..22400 | + | 810 | WP_170172038.1 | DNA primase | - |
| RG62_RS26970 () | 22623..22847 | - | 225 | WP_000713561.1 | EexN family lipoprotein | - |
| RG62_RS26975 () | 22856..23500 | - | 645 | WP_001310442.1 | hypothetical protein | VF |
| RG62_RS26980 () | 23506..24501 | - | 996 | WP_001028541.1 | hypothetical protein | VF |
| RG62_RS26985 () | 24505..24762 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| RG62_RS26990 () | 24759..25061 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| RG62_RS26995 () | 25042..25299 | - | 258 | WP_001542015.1 | hypothetical protein | - |
| RG62_RS27000 () | 25333..25986 | - | 654 | WP_023225999.1 | hypothetical protein | - |
| RG62_RS28505 () | 25997..26167 | - | 171 | WP_024148085.1 | hypothetical protein | - |
| RG62_RS27005 () | 26171..26614 | - | 444 | WP_000498521.1 | NfeD family protein | - |
| RG62_RS27010 () | 26676..27629 | - | 954 | WP_072113668.1 | SPFH/Band 7/PHB domain protein | - |
| RG62_RS28510 () | 27656..27832 | - | 177 | WP_000753050.1 | hypothetical protein | - |
| RG62_RS27015 () | 27825..28040 | - | 216 | WP_073527795.1 | DUF1187 family protein | - |
| RG62_RS27020 () | 28033..28539 | - | 507 | WP_001326595.1 | CaiF/GrlA family transcriptional regulator | - |
| RG62_RS27025 () | 29617..30645 | + | 1029 | WP_001175215.1 | replication initiation protein | - |
| RG62_RS27050 () | 32055..32216 | + | 162 | WP_001434039.1 | type I toxin-antitoxin system Hok family toxin | - |
| RG62_RS27055 () | 32366..32962 | + | 597 | WP_000125164.1 | hypothetical protein | - |
| RG62_RS28515 () | 32980..33264 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| RG62_RS27065 () | 33338..34003 | - | 666 | WP_000532148.1 | P-loop NTPase | - |
| RG62_RS27075 () | 34600..34929 | + | 330 | WP_000855121.1 | hypothetical protein | - |
| RG62_RS27085 () | 35508..35831 | + | 324 | WP_000427402.1 | hypothetical protein | - |
| RG62_RS27090 () | 35872..36081 | + | 210 | WP_000866037.1 | hypothetical protein | - |
| RG62_RS27095 () | 36179..36403 | + | 225 | WP_000814383.1 | hypothetical protein | - |
| RG62_RS27100 () | 36455..36715 | + | 261 | WP_022645141.1 | hypothetical protein | Toxin Detail |
| RG62_RS27105 () | 36705..36956 | + | 252 | WP_022645142.1 | transcriptional regulator | Antitoxin Detail |
| RG62_RS27120 () | 37506..37784 | + | 279 | WP_000545937.1 | hypothetical protein | - |
| RG62_RS27125 () | 38172..38354 | - | 183 | WP_001485010.1 | hypothetical protein | - |
| RG62_RS27130 () | 38912..39094 | + | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| RG62_RS27135 () | 39119..39556 | + | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| RG62_RS27140 () | 39688..40008 | - | 321 | WP_001401701.1 | hypothetical protein | - |
| RG62_RS28295 () | 40342..40520 | - | 179 | Protein_54 | hypothetical protein | - |
| RG62_RS27150 () | 40731..41180 | - | 450 | WP_052974092.1 | hypothetical protein | - |
| RG62_RS27155 () | 41200..41907 | - | 708 | WP_000108794.1 | hypothetical protein | - |
| RG62_RS27160 () | 41909..42661 | - | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| RG62_RS27165 () | 42679..43080 | - | 402 | WP_021575837.1 | hypothetical protein | - |
| RG62_RS27170 () | 43449..43790 | + | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| RG62_RS27175 () | 43787..48016 | + | 4230 | WP_073527797.1 | relaxase | - |
| RG62_RS28520 () | 48059..48499 | - | 441 | WP_021537782.1 | hypothetical protein | - |
| RG62_RS27185 () | 49071..49277 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| RG62_RS27190 () | 49346..51511 | - | 2166 | WP_046424380.1 | type IA DNA topoisomerase | - |
| RG62_RS27195 () | 51516..52091 | - | 576 | WP_001303470.1 | hypothetical protein | - |
| RG62_RS27200 () | 52261..53937 | - | 1677 | WP_000289343.1 | PcfJ domain-containing protein | - |
| RG62_RS27700 () | 54032..54547 | - | 516 | WP_065358361.1 | thermonuclease family protein | - |
| RG62_RS27210 () | 54594..55247 | - | 654 | WP_000572551.1 | hypothetical protein | - |
| RG62_RS27215 () | 55259..56383 | - | 1125 | WP_000486719.1 | site-specific integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|