MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 118149 bp
Accession: NZ_CP010219 Location: 1933031..2051179 Organism: Escherichia coli strain M18 Replicon: chromosome
Accession: NZ_CP010219 Location: 1933031..2051179 Organism: Escherichia coli strain M18 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG62_RS10095 () | 1929121..1931256 | - | 2136 | WP_032178689.1 | ornithine decarboxylase | - |
| RG62_RS28585 () | 1931418..1931501 | - | 84 | WP_211180506.1 | protein YqgH | - |
| RG62_RS10105 () | 1931654..1932361 | + | 708 | WP_000234514.1 | DUF554 domain-containing protein | - |
| RG62_RS10115 () | 1932740..1934002 | + | 1263 | WP_073520642.1 | integrase arm-type DNA-binding domain-containing protein | - |
| RG62_RS10120 () | 1935294..1935572 | + | 279 | WP_073520776.1 | peroxidase | - |
| RG62_RS10125 () | 1935576..1936703 | + | 1128 | WP_073520643.1 | XRE family transcriptional regulator | - |
| RG62_RS10130 () | 1936756..1938543 | - | 1788 | WP_073527658.1 | hypothetical protein | - |
| RG62_RS28395 () | 1938613..1938762 | - | 150 | WP_157916178.1 | hypothetical protein | - |
| RG62_RS10135 () | 1938963..1939387 | - | 425 | Protein_1847 | phosphoadenosine phosphosulfate reductase | - |
| RG62_RS10140 () | 1939571..1940215 | - | 645 | WP_073520645.1 | hypothetical protein | - |
| RG62_RS10145 () | 1940415..1941861 | - | 1447 | Protein_1849 | AAA family ATPase | - |
| RG62_RS10150 () | 1942327..1943715 | - | 1389 | WP_073520646.1 | type VI secretion system ImpA family N-terminal domain-containing protein | - |
| RG62_RS10160 () | 1944141..1945868 | - | 1728 | WP_149025835.1 | AAA family ATPase | - |
| RG62_RS10175 () | 1945928..1947156 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| RG62_RS10180 () | 1947456..1948700 | - | 1245 | WP_073520648.1 | GIY-YIG nuclease family protein | - |
| RG62_RS10185 () | 1948856..1949257 | - | 402 | WP_073520649.1 | hypothetical protein | - |
| RG62_RS10195 () | 1949588..1949947 | - | 360 | WP_073520651.1 | DUF596 domain-containing protein | - |
| RG62_RS28400 () | 1949944..1950198 | - | 255 | WP_175406691.1 | hemagglutinin | - |
| RG62_RS28405 () | 1950295..1950537 | - | 243 | Protein_1857 | hypothetical protein | - |
| RG62_RS10205 () | 1950590..1950826 | - | 237 | WP_073520653.1 | hypothetical protein | - |
| RG62_RS10210 () | 1951465..1951800 | - | 336 | WP_073520654.1 | hypothetical protein | - |
| RG62_RS10215 () | 1951800..1952873 | - | 1074 | WP_164997242.1 | hypothetical protein | VF |
| RG62_RS10225 () | 1952884..1953135 | - | 252 | Protein_1861 | hypothetical protein | - |
| RG62_RS10230 () | 1953294..1953479 | - | 186 | WP_071531845.1 | hypothetical protein | - |
| RG62_RS10240 () | 1953953..1954408 | - | 456 | WP_073520655.1 | hypothetical protein | - |
| RG62_RS10245 () | 1954413..1954922 | - | 510 | WP_073520656.1 | hypothetical protein | - |
| RG62_RS10250 () | 1955181..1955570 | - | 390 | WP_064769067.1 | hypothetical protein | - |
| RG62_RS10260 () | 1955573..1964773 | - | 9201 | WP_077898726.1 | hypothetical protein | VF |
| RG62_RS10265 () | 1964789..1965316 | - | 528 | WP_053264743.1 | hypothetical protein | VF |
| RG62_RS10270 () | 1965326..1966978 | - | 1653 | WP_001376511.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| RG62_RS10275 () | 1967618..1967824 | + | 207 | WP_049590175.1 | DUF4222 domain-containing protein | - |
| RG62_RS10280 () | 1967877..1968110 | - | 234 | WP_053264776.1 | hypothetical protein | - |
| RG62_RS10285 () | 1968206..1968829 | - | 624 | WP_053264742.1 | hypothetical protein | - |
| RG62_RS10290 () | 1968950..1969129 | - | 180 | WP_073519842.1 | hypothetical protein | - |
| RG62_RS10295 () | 1969135..1969548 | - | 414 | WP_073527661.1 | hypothetical protein | - |
| RG62_RS10300 () | 1969545..1969928 | - | 384 | WP_073520660.1 | hypothetical protein | - |
| RG62_RS10310 () | 1970188..1970757 | - | 570 | WP_073527662.1 | inovirus Gp2 family protein | - |
| RG62_RS10325 () | 1971477..1971626 | - | 150 | WP_073527663.1 | hemolysin activation protein | - |
| RG62_RS10330 () | 1972389..1972595 | + | 207 | WP_001095911.1 | AlpA family transcriptional regulator | - |
| RG62_RS10335 () | 1972683..1973291 | + | 609 | WP_073527664.1 | hypothetical protein | - |
| RG62_RS10340 () | 1974731..1975753 | + | 1023 | WP_073527665.1 | hypothetical protein | - |
| RG62_RS10345 () | 1975837..1976709 | + | 873 | WP_001069762.1 | GTPase family protein | - |
| RG62_RS10350 () | 1977081..1979927 | + | 2847 | WP_073527666.1 | Ag43/Cah family autotransporter adhesin | - |
| RG62_RS10355 () | 1979998..1980231 | + | 234 | WP_073527667.1 | DUF905 family protein | - |
| RG62_RS10365 () | 1980331..1981149 | + | 819 | WP_073527668.1 | DUF945 domain-containing protein | - |
| RG62_RS10370 () | 1981240..1981725 | + | 486 | WP_073527669.1 | antirestriction protein | - |
| RG62_RS10375 () | 1981741..1982217 | + | 477 | WP_041124171.1 | RadC family protein | - |
| RG62_RS10380 () | 1982286..1982507 | + | 222 | WP_047661878.1 | DUF987 domain-containing protein | - |
| RG62_RS10385 () | 1982522..1983166 | + | 645 | WP_047661877.1 | hypothetical protein | - |
| RG62_RS10390 () | 1983216..1983584 | + | 369 | WP_047661876.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| RG62_RS10395 () | 1983674..1984051 | + | 378 | WP_073527670.1 | TA system toxin CbtA family protein | Toxin Detail |
| RG62_RS27860 () | 1984048..1984197 | + | 150 | Protein_1890 | hypothetical protein | - |
| RG62_RS27865 () | 1984273..1984470 | + | 198 | WP_087891818.1 | DUF957 domain-containing protein | - |
| RG62_RS10405 () | 1984555..1985400 | + | 846 | WP_073527671.1 | DUF4942 domain-containing protein | - |
| RG62_RS10420 () | 1986808..1988351 | + | 1544 | Protein_1894 | hypothetical protein | VF |
| RG62_RS10425 () | 1988676..1989212 | - | 537 | WP_000942786.1 | hypothetical protein | VF |
| RG62_RS10430 () | 1989214..1990392 | - | 1179 | WP_032178690.1 | hypothetical protein | VF |
| RG62_RS10435 () | 1990389..1991366 | - | 978 | WP_000633238.1 | hypothetical protein | VF |
| RG62_RS10440 () | 1991369..1991968 | - | 600 | WP_001250465.1 | hypothetical protein | VF |
| RG62_RS10445 () | 1991965..1992336 | - | 372 | WP_000820104.1 | hypothetical protein | VF |
| RG62_RS10450 () | 1992333..1992896 | - | 564 | WP_073527672.1 | hypothetical protein | VF |
| RG62_RS10455 () | 1992900..1993355 | - | 456 | WP_001087296.1 | hypothetical protein | VF |
| RG62_RS10460 () | 1993372..1994595 | - | 1224 | WP_001173448.1 | hypothetical protein | VF |
| RG62_RS10465 () | 1994595..1996088 | - | 1494 | WP_000249348.1 | hypothetical protein | VF |
| RG62_RS10470 () | 1996088..1998148 | - | 2061 | WP_000498824.1 | hypothetical protein | VF |
| RG62_RS10475 () | 1998178..1999137 | - | 960 | WP_000135067.1 | hypothetical protein | VF |
| RG62_RS10480 () | 1999155..1999565 | - | 411 | WP_001324279.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| RG62_RS10485 () | 1999631..2000440 | - | 810 | WP_001365924.1 | hypothetical protein | VF |
| RG62_RS10490 () | 2000570..2005135 | - | 4566 | WP_001034505.1 | hypothetical protein | VF |
| RG62_RS10505 () | 2005620..2007302 | - | 1683 | WP_000259303.1 | glycolate permease GlcA | - |
| RG62_RS10510 () | 2007658..2009829 | - | 2172 | WP_000084053.1 | malate synthase G | - |
| RG62_RS10515 () | 2009851..2010255 | - | 405 | WP_000853256.1 | protein GlcG | - |
| RG62_RS10520 () | 2010260..2011483 | - | 1224 | WP_001194682.1 | glycolate oxidase subunit GlcF | - |
| RG62_RS10525 () | 2011494..2012546 | - | 1053 | WP_000943059.1 | glycolate oxidase subunit GlcE | - |
| RG62_RS10530 () | 2012546..2014045 | - | 1500 | WP_000026117.1 | glycolate oxidase subunit GlcD | - |
| RG62_RS10535 () | 2014296..2015060 | + | 765 | WP_001297764.1 | transcriptional regulator GlcC | - |
| RG62_RS10540 () | 2015067..2016209 | - | 1143 | WP_000388786.1 | DNA-binding protein | - |
| RG62_RS10550 () | 2016580..2018301 | + | 1722 | WP_001355868.1 | hypothetical protein | VF |
| RG62_RS10555 () | 2018298..2019212 | + | 915 | WP_001077143.1 | NAD-dependent epimerase/dehydratase family protein | - |
| RG62_RS10560 () | 2019244..2019492 | + | 249 | WP_000248097.1 | acyl carrier protein | - |
| RG62_RS10565 () | 2019492..2020664 | + | 1173 | WP_000524972.1 | hypothetical protein | VF |
| RG62_RS10570 () | 2020700..2021779 | - | 1080 | WP_001300858.1 | LPS export ABC transporter permease LptG | - |
| RG62_RS10575 () | 2021776..2022846 | - | 1071 | WP_000779661.1 | LPS export ABC transporter permease LptF | - |
| RG62_RS10580 () | 2022877..2023437 | - | 561 | WP_001299422.1 | YtfJ family protein | - |
| RG62_RS10585 () | 2023449..2024273 | - | 825 | WP_000984976.1 | hypothetical protein | - |
| RG62_RS10590 () | 2024273..2025622 | - | 1350 | WP_000896880.1 | lipopolysaccharide biosynthesis protein | - |
| RG62_RS10595 () | 2025668..2026426 | - | 759 | WP_000339512.1 | hypothetical protein | - |
| RG62_RS10600 () | 2026458..2027171 | - | 714 | WP_001076233.1 | thymidylate kinase | - |
| RG62_RS10605 () | 2027345..2028037 | + | 693 | WP_001190783.1 | thymidylate kinase | - |
| RG62_RS10610 () | 2028086..2029585 | - | 1500 | WP_000933296.1 | inorganic phosphate transporter PitB | - |
| RG62_RS10615 () | 2029877..2031736 | - | 1860 | WP_001345957.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| RG62_RS10620 () | 2031941..2032807 | + | 867 | WP_001298746.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| RG62_RS10625 () | 2032930..2033178 | - | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| RG62_RS10630 () | 2033191..2033532 | - | 342 | WP_000544952.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| RG62_RS10635 () | 2033525..2034013 | - | 489 | WP_000134014.1 | hydrogenase-2 assembly chaperone | - |
| RG62_RS10640 () | 2034006..2034500 | - | 495 | WP_001221953.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| RG62_RS10645 () | 2034500..2036203 | - | 1704 | WP_000083065.1 | hydrogenase 2 large subunit | - |
| RG62_RS10650 () | 2036200..2037378 | - | 1179 | WP_000017694.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| RG62_RS10655 () | 2037368..2038354 | - | 987 | WP_001081876.1 | hydrogenase 2 operon protein HybA | - |
| RG62_RS10660 () | 2038357..2039475 | - | 1119 | WP_000145410.1 | hydrogenase 2 small subunit | - |
| RG62_RS10670 () | 2039664..2039951 | - | 288 | WP_001059136.1 | DUF2623 domain-containing protein | - |
| RG62_RS10675 () | 2040070..2040957 | - | 888 | WP_001137768.1 | dienelactone hydrolase family protein | - |
| RG62_RS10680 () | 2041114..2042154 | + | 1041 | WP_000262154.1 | L-glyceraldehyde 3-phosphate reductase | - |
| RG62_RS10685 () | 2042194..2042688 | - | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| RG62_RS10690 () | 2042879..2043763 | + | 885 | WP_000018760.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| RG62_RS10695 () | 2043802..2044227 | - | 426 | WP_001240712.1 | TonB system transport protein ExbD | - |
| RG62_RS10700 () | 2044234..2044968 | - | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| RG62_RS10710 () | 2045220..2046407 | + | 1188 | WP_000763931.1 | cystathionine beta-lyase | - |
| RG62_RS10715 () | 2046547..2047206 | + | 660 | WP_000268419.1 | DedA family protein | - |
| RG62_RS10720 () | 2047246..2048145 | - | 900 | WP_000817717.1 | DNA-binding transcriptional regulator YqhC | - |
| RG62_RS10730 () | 2048339..2049502 | + | 1164 | WP_001058807.1 | alcohol dehydrogenase | - |
| RG62_RS10735 () | 2049607..2050434 | + | 828 | WP_000013149.1 | 2,5-didehydrogluconate reductase DkgA | - |
| RG62_RS10740 () | 2050634..2051560 | + | 927 | WP_000691598.1 | YbjP/YqhG family protein | - |
| RG62_RS10745 () | 2051611..2051868 | + | 258 | WP_000848528.1 | lipoprotein YqhH | - |
| RG62_RS10750 () | 2051911..2054130 | - | 2220 | WP_000095187.1 | YgiQ family radical SAM protein | - |
| RG62_RS10755 () | 2054241..2055653 | - | 1413 | WP_000059395.1 | cell division protein FtsP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|