MGE detailed information
MGE type: Prophage MGE length: 50435 bp
Accession: NZ_CP010219 Location: 178073..228507 Organism: Escherichia coli strain M18 Replicon: chromosome
Accession: NZ_CP010219 Location: 178073..228507 Organism: Escherichia coli strain M18 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG62_RS28535 () | 174062..174109 | + | 48 | WP_211180494.1 | protein YnaN | - |
| RG62_RS00930 () | 174123..175106 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| RG62_RS00940 () | 175584..176957 | + | 1374 | WP_000123739.1 | ATP-dependent RNA helicase DbpA | - |
| RG62_RS00945 () | 177086..178021 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| RG62_RS00950 () | 178073..179308 | - | 1236 | WP_000040852.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| RG62_RS00955 () | 179310..179525 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| RG62_RS00960 () | 179604..179801 | - | 198 | WP_024170988.1 | DUF1187 family protein | - |
| - () | 179629..179795 | + | 167 | NuclAT_2 | - | Antitoxin Detail |
| - () | 179629..179795 | + | 167 | NuclAT_2 | - | Antitoxin Detail |
| - () | 179629..179795 | + | 167 | NuclAT_2 | - | Antitoxin Detail |
| - () | 179629..179795 | + | 167 | NuclAT_2 | - | Antitoxin Detail |
| RG62_RS00965 () | 179794..179988 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| RG62_RS00970 () | 180045..180854 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| RG62_RS00975 () | 180847..183447 | - | 2601 | WP_000105136.1 | exodeoxyribonuclease VIII | - |
| RG62_RS00980 () | 183549..183824 | - | 276 | WP_024251429.1 | hypothetical protein | - |
| RG62_RS00985 () | 183899..184069 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| RG62_RS00990 () | 184069..184290 | - | 222 | WP_000560224.1 | killing protein KilR | - |
| RG62_RS01000 () | 184732..185220 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| RG62_RS01005 () | 185217..185372 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| RG62_RS01010 () | 185383..185562 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| RG62_RS01020 () | 185805..186224 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| RG62_RS01025 () | 186304..186558 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| RG62_RS01030 () | 186555..186977 | + | 423 | WP_000693803.1 | hypothetical protein | - |
| RG62_RS01035 () | 187055..187843 | + | 789 | WP_001396581.1 | hypothetical protein | - |
| RG62_RS01040 () | 187850..188596 | + | 747 | WP_000788769.1 | ATP-binding protein | - |
| RG62_RS01045 () | 188619..189380 | + | 762 | WP_000450658.1 | DUF1627 domain-containing protein | - |
| RG62_RS01050 () | 189396..189827 | + | 432 | WP_001141107.1 | DUF977 family protein | - |
| RG62_RS01060 () | 190021..191175 | + | 1155 | WP_000385105.1 | ATP-binding protein | - |
| RG62_RS01065 () | 191150..193414 | + | 2265 | WP_000091105.1 | S8 family peptidase | - |
| RG62_RS01075 () | 193831..194430 | + | 600 | WP_000940319.1 | DUF1367 family protein | - |
| RG62_RS01080 () | 194430..194720 | + | 291 | WP_000247763.1 | DUF1364 domain-containing protein | - |
| RG62_RS01085 () | 194717..195259 | + | 543 | WP_000640161.1 | DUF1133 family protein | - |
| RG62_RS01090 () | 196304..196732 | + | 429 | WP_000506936.1 | cell envelope integrity protein TolA | - |
| RG62_RS01095 () | 196904..197278 | + | 375 | WP_001348108.1 | hypothetical protein | - |
| RG62_RS01100 () | 197530..197745 | + | 216 | WP_000839565.1 | phage lysis protein EssD | - |
| RG62_RS01105 () | 197745..198242 | + | 498 | WP_001135310.1 | lysozyme RrrD | - |
| RG62_RS27255 () | 198459..198644 | + | 186 | WP_001228688.1 | prophage lysis lipoprotein RzoD | - |
| RG62_RS01115 () | 198841..200298 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| RG62_RS01125 () | 200436..201227 | + | 792 | WP_001291094.1 | ParB/Srx family N-terminal domain-containing protein | - |
| RG62_RS01130 () | 201220..202152 | + | 933 | WP_001204037.1 | hypothetical protein | - |
| RG62_RS01135 () | 202088..202339 | + | 252 | WP_000613571.1 | hypothetical protein | - |
| RG62_RS01140 () | 202343..203437 | + | 1095 | WP_000089447.1 | terminase small subunit | - |
| RG62_RS01145 () | 203418..204719 | + | 1302 | WP_000625348.1 | terminase family protein | - |
| RG62_RS01150 () | 204722..206128 | + | 1407 | WP_000763703.1 | DUF4055 domain-containing protein | - |
| RG62_RS01155 () | 206112..207224 | + | 1113 | WP_001351715.1 | hypothetical protein | - |
| RG62_RS01160 () | 207329..208093 | + | 765 | WP_000770044.1 | hypothetical protein | - |
| RG62_RS01165 () | 208192..209331 | + | 1140 | WP_000918482.1 | hypothetical protein | - |
| RG62_RS28320 () | 209374..209550 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| RG62_RS01170 () | 209554..209949 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| RG62_RS01175 () | 209949..210332 | + | 384 | WP_000524260.1 | hypothetical protein | - |
| RG62_RS01180 () | 210333..210713 | + | 381 | WP_001029815.1 | hypothetical protein | - |
| RG62_RS01185 () | 210710..211102 | + | 393 | WP_000673076.1 | hypothetical protein | - |
| RG62_RS01190 () | 211129..212091 | + | 963 | WP_000094292.1 | hypothetical protein | - |
| RG62_RS01210 () | 213704..213937 | + | 234 | WP_149025825.1 | DNA-packaging protein | - |
| RG62_RS01215 () | 214409..217642 | + | 3234 | WP_000840622.1 | phage tail tape measure protein | - |
| RG62_RS01220 () | 217635..217973 | + | 339 | WP_000024051.1 | phage tail protein | - |
| RG62_RS01225 () | 217973..218671 | + | 699 | WP_001152432.1 | phage minor tail protein L | - |
| RG62_RS01230 () | 218677..219420 | + | 744 | WP_001396591.1 | C40 family peptidase | - |
| RG62_RS01235 () | 219318..219965 | + | 648 | WP_000741591.1 | tail assembly protein | - |
| RG62_RS01240 () | 220026..223439 | + | 3414 | WP_053264956.1 | host specificity protein J | - |
| RG62_RS01245 () | 223509..224108 | + | 600 | WP_001230290.1 | hypothetical protein | VF |
| RG62_RS01250 () | 224173..227244 | + | 3072 | WP_024251431.1 | prophage tail fiber N-terminal domain-containing protein | - |
| RG62_RS01255 () | 227244..227819 | + | 576 | WP_001351719.1 | tail fiber assembly protein | - |
| RG62_RS01260 () | 227917..228507 | - | 591 | WP_000078178.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| RG62_RS01265 () | 228824..229057 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| RG62_RS27735 () | 229126..229239 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| RG62_RS01270 () | 230016..230450 | - | 435 | WP_001082294.1 | universal stress protein UspF | - |
| RG62_RS01275 () | 230591..231724 | - | 1134 | WP_046201463.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|