MGE detailed information
MGE type: Conjugative plasmid MGE length: 61058 bp
Accession: NZ_CP010215 Location: 1..61058 Organism: Escherichia coli strain M15 Replicon: plasmid B
Accession: NZ_CP010215 Location: 1..61058 Organism: Escherichia coli strain M15 Replicon: plasmid B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG61_RS27440 () | 1267..3465 | - | 2199 | WP_073519998.1 | type IV conjugative transfer system coupling protein TraD | - |
| RG61_RS27445 () | 3718..4449 | - | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| RG61_RS27450 () | 4463..4972 | - | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| RG61_RS27455 () | 4969..7794 | - | 2826 | WP_001007030.1 | conjugal transfer mating pair stabilization protein TraG | - |
| RG61_RS27460 () | 7791..9167 | - | 1377 | WP_000982833.1 | conjugal transfer protein TraH | - |
| RG61_RS27465 () | 9164..9526 | - | 363 | WP_073519999.1 | P-type conjugative transfer protein TrbJ | - |
| RG61_RS27470 () | 9456..10001 | - | 546 | WP_000060037.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| RG61_RS27475 () | 9988..10272 | - | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| RG61_RS27480 () | 10391..10738 | - | 348 | WP_072656932.1 | conjugal transfer protein TrbA | - |
| RG61_RS27485 () | 10754..11497 | - | 744 | WP_073520000.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| RG61_RS27490 () | 11490..11737 | - | 248 | Protein_11 | conjugal transfer protein TrbE | - |
| RG61_RS27495 () | 11773..13623 | - | 1851 | WP_073520001.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| RG61_RS27500 () | 13620..14042 | - | 423 | WP_073520002.1 | HNH endonuclease | - |
| RG61_RS27505 () | 14067..14438 | - | 372 | WP_073520003.1 | hypothetical protein | - |
| RG61_RS27510 () | 14435..15073 | - | 639 | WP_073520004.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| RG61_RS27515 () | 15100..15618 | - | 519 | WP_073520005.1 | hypothetical protein | - |
| RG61_RS27520 () | 15681..15992 | - | 312 | WP_073520006.1 | hypothetical protein | - |
| RG61_RS27525 () | 16021..17013 | - | 993 | WP_073520007.1 | conjugal transfer pilus assembly protein TraU | - |
| RG61_RS27530 () | 17010..17642 | - | 633 | WP_073520008.1 | type-F conjugative transfer system protein TraW | - |
| RG61_RS27535 () | 17639..18025 | - | 387 | WP_073520009.1 | type-F conjugative transfer system protein TrbI | - |
| RG61_RS27540 () | 18022..20649 | - | 2628 | WP_073520010.1 | type IV secretion system protein TraC | - |
| RG61_RS27545 () | 20676..21053 | - | 378 | WP_073520011.1 | hypothetical protein | - |
| RG61_RS27550 () | 21050..21523 | - | 474 | WP_073520012.1 | hypothetical protein | - |
| RG61_RS27555 () | 21516..21737 | - | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| RG61_RS27560 () | 21872..22387 | - | 516 | WP_073520013.1 | type IV conjugative transfer system lipoprotein TraV | - |
| RG61_RS27565 () | 22384..22635 | - | 252 | WP_073520014.1 | conjugal transfer protein TrbG | - |
| RG61_RS27570 () | 22628..22948 | - | 321 | WP_073520015.1 | conjugal transfer protein TrbD | - |
| RG61_RS27575 () | 22945..23517 | - | 573 | WP_024179131.1 | conjugal transfer protein TraP | - |
| RG61_RS27580 () | 23507..24934 | - | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| RG61_RS27585 () | 24934..25638 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| RG61_RS27590 () | 25649..26215 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| RG61_RS27595 () | 26237..26548 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| RG61_RS27600 () | 26563..26928 | - | 366 | WP_073520016.1 | type IV conjugative transfer system pilin TraA | - |
| RG61_RS27605 () | 26962..27189 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| RG61_RS27610 () | 27283..27969 | - | 687 | WP_073520017.1 | PAS domain-containing protein | - |
| RG61_RS27615 () | 28160..28543 | - | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| RG61_RS27625 () | 28820..29467 | + | 648 | WP_000614935.1 | hypothetical protein | VF |
| RG61_RS27630 () | 29764..30585 | - | 822 | WP_073520018.1 | DUF945 domain-containing protein | - |
| RG61_RS27635 () | 30703..30990 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| RG61_RS27640 () | 31014..31220 | - | 207 | WP_073520019.1 | single-stranded DNA-binding protein | - |
| RG61_RS28555 () | 31222..31410 | - | 189 | WP_032141200.1 | hypothetical protein | - |
| RG61_RS27655 () | 31910..32068 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 32112..32336 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 32112..32336 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 32112..32336 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 32112..32336 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| RG61_RS27665 () | 32348..33067 | - | 720 | WP_001276234.1 | plasmid SOS inhibition protein A | - |
| RG61_RS27670 () | 33064..33498 | - | 435 | WP_000845949.1 | conjugation system SOS inhibitor PsiB | - |
| RG61_RS27675 () | 33553..35511 | - | 1959 | WP_073520020.1 | ParB/RepB/Spo0J family partition protein | - |
| RG61_RS27680 () | 35576..35809 | - | 234 | WP_001519997.1 | DUF905 family protein | - |
| RG61_RS27685 () | 35865..36404 | - | 540 | WP_009426937.1 | single-stranded DNA-binding protein | - |
| RG61_RS27690 () | 36430..36636 | - | 207 | WP_073520019.1 | single-stranded DNA-binding protein | - |
| RG61_RS27695 () | 36638..36826 | - | 189 | WP_032141200.1 | hypothetical protein | - |
| RG61_RS29270 () | 36749..36973 | + | 225 | WP_013279293.1 | hypothetical protein | - |
| RG61_RS27700 () | 36877..37104 | - | 228 | WP_071594011.1 | hypothetical protein | - |
| RG61_RS27705 () | 37256..37819 | - | 564 | WP_073520021.1 | class I SAM-dependent methyltransferase | - |
| RG61_RS27710 () | 37867..39228 | - | 1362 | WP_000170675.1 | DUF3560 domain-containing protein | - |
| RG61_RS27715 () | 39280..39510 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| RG61_RS28565 () | 39773..40030 | + | 258 | WP_072034878.1 | hypothetical protein | - |
| RG61_RS27725 () | 39940..40182 | - | 243 | WP_142295689.1 | hypothetical protein | - |
| RG61_RS27730 () | 40551..40742 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| RG61_RS27735 () | 40739..41161 | - | 423 | WP_042974081.1 | DUF1380 family protein | - |
| RG61_RS27740 () | 41208..41510 | - | 303 | WP_122987822.1 | antirestriction protein | - |
| RG61_RS27745 () | 41606..42172 | - | 567 | Protein_60 | DUF1472 domain-containing protein | - |
| RG61_RS29275 () | 42488..42821 | - | 334 | Protein_61 | hypothetical protein | - |
| RG61_RS27755 () | 42867..43301 | - | 435 | WP_073520023.1 | DUF1380 family protein | - |
| RG61_RS27760 () | 43315..43536 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| RG61_RS27765 () | 43537..44220 | - | 684 | WP_073520024.1 | DNA methylase | - |
| RG61_RS27770 () | 44296..44587 | - | 292 | Protein_65 | hypothetical protein | - |
| RG61_RS27775 () | 44735..45697 | + | 963 | WP_000959874.1 | plasmid segregation protein ParM | - |
| RG61_RS27780 () | 45700..46050 | + | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| RG61_RS27785 () | 46173..46454 | - | 282 | WP_001333089.1 | hypothetical protein | - |
| RG61_RS28570 () | 46582..46816 | - | 235 | Protein_69 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| RG61_RS28575 () | 46827..47132 | - | 306 | WP_001152000.1 | hypothetical protein | - |
| RG61_RS27795 () | 47343..47474 | + | 132 | Protein_71 | transposase | - |
| RG61_RS27800 () | 47752..49524 | - | 1773 | WP_001262766.1 | DUF262 domain-containing protein | - |
| RG61_RS27805 () | 49809..50210 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| RG61_RS29280 () | 50143..50400 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| RG61_RS27815 () | 50493..51146 | - | 654 | WP_000616800.1 | CPBP family intramembrane metalloprotease | - |
| RG61_RS27820 () | 51336..51722 | - | 387 | WP_073520026.1 | hypothetical protein | - |
| RG61_RS28580 () | 51854..52114 | + | 261 | WP_140429678.1 | hypothetical protein | - |
| RG61_RS27825 () | 52084..52941 | - | 858 | WP_073520027.1 | incFII family plasmid replication initiator RepA | - |
| RG61_RS27830 () | 52934..53008 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| RG61_RS27835 () | 53057..53203 | + | 147 | WP_001383969.1 | hypothetical protein | - |
| RG61_RS27840 () | 53247..53501 | - | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| RG61_RS27845 () | 53741..54331 | - | 591 | WP_073520028.1 | DUF2726 domain-containing protein | - |
| RG61_RS27850 () | 54369..54578 | - | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| RG61_RS27855 () | 54624..55085 | - | 462 | WP_073520029.1 | thermonuclease family protein | - |
| RG61_RS27860 () | 55330..55542 | - | 213 | WP_001311693.1 | hypothetical protein | - |
| RG61_RS27865 () | 55680..56240 | - | 561 | WP_073520030.1 | fertility inhibition protein FinO | - |
| RG61_RS27870 () | 56295..57035 | - | 741 | WP_073520031.1 | conjugal transfer pilus acetylase TraX | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|