MGE detailed information
MGE type: Prophage MGE length: 73445 bp
Accession: NZ_CP010213 Location: 2157738..2231182 Organism: Escherichia coli strain M15 Replicon: chromosome
Accession: NZ_CP010213 Location: 2157738..2231182 Organism: Escherichia coli strain M15 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG61_RS11090 () | 2153881..2155692 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| RG61_RS11095 () | 2155729..2156370 | + | 642 | WP_000800523.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| RG61_RS11100 () | 2156426..2157604 | - | 1179 | WP_000173491.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| RG61_RS11105 () | 2157738..2158028 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| RG61_RS11110 () | 2158095..2158451 | + | 357 | WP_001295500.1 | protein YebF | - |
| RG61_RS11125 () | 2158777..2159436 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| RG61_RS11135 () | 2159645..2161705 | + | 2061 | WP_000936956.1 | oligopeptidase B | - |
| RG61_RS11140 () | 2161702..2162364 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| RG61_RS11145 () | 2162388..2163044 | - | 657 | WP_000011652.1 | carbon-nitrogen hydrolase family protein | - |
| RG61_RS11150 () | 2163146..2163376 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| RG61_RS11155 () | 2163515..2163889 | + | 375 | WP_000204699.1 | CopC domain-containing protein YobA | - |
| RG61_RS11160 () | 2163893..2164765 | + | 873 | WP_000879280.1 | copper homeostasis membrane protein CopD | - |
| RG61_RS11165 () | 2164778..2165119 | + | 342 | WP_000976492.1 | YebY family protein | - |
| RG61_RS11175 () | 2165512..2166588 | - | 1077 | WP_001189091.1 | hypothetical protein ; Integrase | Integrase |
| RG61_RS11180 () | 2166554..2166835 | - | 282 | WP_001311878.1 | excisionase | - |
| RG61_RS11185 () | 2166942..2167130 | - | 189 | WP_001356607.1 | DUF1187 family protein | - |
| - () | 2166946..2167124 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2166946..2167124 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2166946..2167124 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2166946..2167124 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| RG61_RS11190 () | 2167123..2167317 | - | 195 | WP_042853000.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| RG61_RS11195 () | 2167374..2168183 | - | 810 | WP_000166317.1 | recombination protein RecT | - |
| RG61_RS11200 () | 2168176..2170809 | - | 2634 | WP_021527613.1 | exodeoxyribonuclease VIII | - |
| RG61_RS11205 () | 2170908..2171183 | - | 276 | WP_001452559.1 | hypothetical protein | - |
| RG61_RS11210 () | 2171258..2171428 | - | 171 | WP_001359121.1 | hypothetical protein | - |
| RG61_RS11215 () | 2171428..2171649 | - | 222 | WP_073519610.1 | cell division protein FtsZ | - |
| RG61_RS11225 () | 2172179..2172373 | + | 195 | WP_001419881.1 | hypothetical protein | - |
| RG61_RS11230 () | 2172339..2172557 | - | 219 | WP_000232638.1 | hypothetical protein | - |
| RG61_RS11235 () | 2172857..2173276 | - | 420 | WP_000410105.1 | helix-turn-helix domain-containing protein | - |
| RG61_RS11240 () | 2173373..2173615 | + | 243 | WP_001033914.1 | helix-turn-helix domain-containing protein | - |
| RG61_RS11245 () | 2173612..2174034 | + | 423 | WP_000702025.1 | hypothetical protein | - |
| RG61_RS11250 () | 2174112..2175242 | + | 1131 | WP_073519611.1 | hypothetical protein | - |
| RG61_RS11255 () | 2175249..2175995 | + | 747 | WP_073519612.1 | IS21 family transposase ISCsa9 | Transposase |
| RG61_RS11260 () | 2176018..2176779 | + | 762 | WP_073519613.1 | DUF1627 domain-containing protein | - |
| RG61_RS11265 () | 2176795..2177217 | + | 423 | WP_073519614.1 | DUF977 family protein | - |
| RG61_RS11270 () | 2177214..2177414 | + | 201 | WP_073519615.1 | hypothetical protein | - |
| RG61_RS28875 () | 2177746..2177934 | + | 189 | WP_000797270.1 | hypothetical protein | - |
| RG61_RS28880 () | 2177936..2178193 | + | 258 | WP_073528026.1 | DUF4014 family protein | - |
| RG61_RS11285 () | 2178298..2179317 | + | 1020 | WP_073519448.1 | IS110 family transposase ISEc11 | Transposase |
| RG61_RS11290 () | 2179598..2180116 | + | 519 | WP_073519617.1 | DUF551 domain-containing protein | - |
| RG61_RS11295 () | 2180113..2180508 | + | 396 | WP_073519618.1 | hypothetical protein | - |
| RG61_RS28885 () | 2180524..2180697 | - | 174 | WP_123006590.1 | hypothetical protein | - |
| RG61_RS11300 () | 2180742..2180954 | + | 213 | WP_000018421.1 | type I toxin-antitoxin system Hok family toxin | - |
| RG61_RS11305 () | 2181163..2181342 | + | 180 | WP_000119355.1 | hypothetical protein | - |
| RG61_RS11310 () | 2181361..2181846 | + | 486 | WP_000818163.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| RG61_RS11315 () | 2181778..2181957 | - | 180 | WP_073519619.1 | hypothetical protein | - |
| RG61_RS28890 () | 2182031..2182282 | + | 252 | WP_049281514.1 | hypothetical protein | - |
| RG61_RS11325 () | 2182354..2182953 | + | 600 | WP_061892354.1 | DUF1367 family protein | - |
| RG61_RS11330 () | 2182953..2183243 | + | 291 | WP_073519620.1 | DUF1364 domain-containing protein | - |
| RG61_RS11335 () | 2183240..2183782 | + | 543 | WP_073519621.1 | DUF1133 family protein | - |
| RG61_RS11360 () | 2185357..2185785 | + | 429 | WP_073519622.1 | cell envelope integrity protein TolA | - |
| RG61_RS11365 () | 2186594..2187169 | + | 576 | Protein_2092 | DUF1737 domain-containing protein | - |
| RG61_RS11370 () | 2187252..2187557 | + | 306 | WP_064768310.1 | DUF826 domain-containing protein | - |
| RG61_RS11375 () | 2187635..2187850 | + | 216 | WP_000284506.1 | class II holin family protein | - |
| RG61_RS11380 () | 2187854..2188405 | + | 552 | WP_073519623.1 | YdfR family protein | - |
| RG61_RS11385 () | 2188353..2188613 | - | 261 | WP_073519624.1 | hypothetical protein | - |
| RG61_RS11390 () | 2188728..2189261 | + | 534 | WP_061892325.1 | lysozyme | - |
| RG61_RS11395 () | 2189258..2189725 | + | 468 | WP_061892324.1 | lysis protein | - |
| RG61_RS11400 () | 2189713..2189865 | + | 153 | WP_061892323.1 | hypothetical protein | - |
| RG61_RS28895 () | 2189825..2189926 | + | 102 | Protein_2100 | transcriptional regulator | - |
| RG61_RS11405 () | 2190177..2190656 | - | 480 | WP_073519626.1 | DUF1398 family protein | - |
| RG61_RS11410 () | 2190851..2191041 | + | 191 | Protein_2102 | AlpA family transcriptional regulator | - |
| RG61_RS11415 () | 2191285..2191833 | + | 549 | WP_061892169.1 | terminase small subunit | - |
| RG61_RS11420 () | 2191763..2193733 | + | 1971 | WP_095374683.1 | phage terminase large subunit family protein | - |
| RG61_RS11425 () | 2193717..2193920 | + | 204 | WP_061892171.1 | phage tail protein | - |
| RG61_RS11430 () | 2193917..2195509 | + | 1593 | WP_061892172.1 | phage portal protein | - |
| RG61_RS11435 () | 2195499..2197004 | + | 1506 | WP_073519628.1 | S49 family peptidase | - |
| RG61_RS11440 () | 2197041..2197388 | + | 348 | WP_061892174.1 | head decoration protein | - |
| RG61_RS11445 () | 2197446..2198474 | + | 1029 | WP_073519629.1 | major capsid protein | - |
| RG61_RS11450 () | 2198527..2198907 | + | 381 | WP_061892713.1 | DNA-packaging protein FI | - |
| RG61_RS11455 () | 2198919..2199272 | + | 354 | WP_073519630.1 | head-tail joining protein | - |
| RG61_RS11460 () | 2199284..2199859 | + | 576 | WP_061892715.1 | phage tail protein | - |
| RG61_RS11465 () | 2199856..2200251 | + | 396 | WP_061892716.1 | phage minor tail U family protein | - |
| RG61_RS11470 () | 2200259..2200999 | + | 741 | WP_061892718.1 | phage tail protein | - |
| RG61_RS11475 () | 2201015..2201437 | + | 423 | WP_053294703.1 | phage minor tail protein G | - |
| RG61_RS11480 () | 2201419..2201853 | + | 435 | WP_073519631.1 | phage tail assembly protein T | - |
| RG61_RS11485 () | 2201846..2204425 | + | 2580 | WP_073519632.1 | phage tail tape measure protein | - |
| RG61_RS11490 () | 2204422..2204751 | + | 330 | WP_021528540.1 | phage tail protein | - |
| RG61_RS11495 () | 2204751..2205449 | + | 699 | WP_001152619.1 | phage minor tail protein L | - |
| RG61_RS11500 () | 2205455..2206198 | + | 744 | WP_073519633.1 | C40 family peptidase | - |
| RG61_RS11505 () | 2206135..2206768 | + | 634 | Protein_2121 | tail assembly protein | - |
| RG61_RS11510 () | 2206829..2210242 | + | 3414 | WP_073519634.1 | host specificity protein J | - |
| RG61_RS11515 () | 2210313..2210912 | + | 600 | WP_001233071.1 | hypothetical protein | VF |
| RG61_RS28200 () | 2210977..2212146 | + | 1170 | WP_077897941.1 | prophage tail fiber N-terminal domain-containing protein | - |
| RG61_RS11535 () | 2212130..2212696 | + | 567 | WP_077898153.1 | DUF4376 domain-containing protein | - |
| RG61_RS11540 () | 2212689..2213072 | + | 384 | WP_061892726.1 | DUF1353 domain-containing protein | - |
| RG61_RS11545 () | 2213358..2213540 | + | 183 | WP_077897940.1 | DUF1353 domain-containing protein | - |
| RG61_RS11550 () | 2215440..2216096 | + | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| RG61_RS11555 () | 2216097..2216288 | - | 192 | WP_001296140.1 | YebW family protein | - |
| RG61_RS11560 () | 2216393..2216629 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| RG61_RS11565 () | 2216747..2218186 | - | 1440 | WP_000057022.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| RG61_RS11570 () | 2218266..2220899 | - | 2634 | WP_001299674.1 | hypothetical protein | VF |
| RG61_RS11575 () | 2220868..2222151 | - | 1284 | WP_001207284.1 | membrane integrity lipid transport subunit YebS | - |
| RG61_RS11580 () | 2222281..2222778 | + | 498 | WP_073519635.1 | L-methionine (R)-S-oxide reductase | - |
| RG61_RS11585 () | 2222875..2223573 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| RG61_RS11590 () | 2223593..2225641 | + | 2049 | WP_001326055.1 | carboxy terminal-processing peptidase | - |
| RG61_RS11595 () | 2225833..2226714 | + | 882 | WP_000984517.1 | protease HtpX | - |
| RG61_RS11600 () | 2226760..2228133 | - | 1374 | WP_001127216.1 | MFS transporter | - |
| RG61_RS11605 () | 2228310..2229101 | + | 792 | WP_001262174.1 | DNA-binding transcriptional regulator KdgR | - |
| RG61_RS11610 () | 2229244..2229483 | - | 240 | WP_001211011.1 | hypothetical protein | - |
| RG61_RS11615 () | 2229642..2229785 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| RG61_RS11620 () | 2229860..2230147 | + | 288 | WP_001006865.1 | YebO family protein | - |
| RG61_RS11630 () | 2230817..2230960 | + | 144 | WP_001295496.1 | YobF family protein | - |
| RG61_RS11635 () | 2230973..2231182 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| RG61_RS11640 () | 2231348..2232157 | + | 810 | WP_000010129.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| RG61_RS11645 () | 2232154..2232720 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| RG61_RS11655 () | 2233150..2233608 | - | 459 | WP_073519636.1 | DUF986 family protein | - |
| RG61_RS11660 () | 2233663..2234514 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| RG61_RS11665 () | 2234527..2235327 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|