MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 116581 bp
Accession: NZ_CP010201 Location: 1..116581 Organism: Escherichia coli strain M10 Replicon: plasmid A
Accession: NZ_CP010201 Location: 1..116581 Organism: Escherichia coli strain M10 Replicon: plasmid A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG59_RS24965 () | 67..273 | + | 207 | WP_073553859.1 | single-stranded DNA-binding protein | - |
| RG59_RS26700 () | 260..337 | + | 78 | Protein_1 | single-stranded DNA-binding protein | - |
| RG59_RS24970 () | 951..2852 | + | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| RG59_RS24975 () | 3002..3415 | + | 414 | WP_073553860.1 | single-stranded DNA-binding protein | - |
| RG59_RS24980 () | 3472..3705 | + | 234 | WP_000005971.1 | DUF905 domain-containing protein | - |
| RG59_RS24985 () | 3764..5722 | + | 1959 | WP_073553861.1 | ParB/RepB/Spo0J family partition protein | - |
| RG59_RS24990 () | 5777..6211 | + | 435 | WP_000845959.1 | conjugation system SOS inhibitor PsiB | - |
| RG59_RS24995 () | 6208..6927 | + | 720 | WP_001276247.1 | plasmid SOS inhibition protein A | - |
| RG59_RS25000 () | 6924..7238 | + | 315 | WP_000872079.1 | hypothetical protein | - |
| - () | 7187..7381 | + | 195 | NuclAT_0 | - | - |
| - () | 7187..7381 | + | 195 | NuclAT_0 | - | - |
| - () | 7187..7381 | + | 195 | NuclAT_0 | - | - |
| - () | 7187..7381 | + | 195 | NuclAT_0 | - | - |
| RG59_RS25010 () | 7446..7607 | + | 162 | WP_000775238.1 | type I toxin-antitoxin system Hok family toxin | - |
| RG59_RS26255 () | 7830..8030 | + | 201 | WP_077626024.1 | hypothetical protein | - |
| RG59_RS26705 () | 7952..8153 | + | 202 | Protein_11 | hypothetical protein | - |
| RG59_RS25020 () | 8274..8480 | + | 207 | WP_000547948.1 | hypothetical protein | - |
| RG59_RS25025 () | 8504..8800 | + | 297 | WP_073553862.1 | hypothetical protein | - |
| RG59_RS25030 () | 8905..9726 | + | 822 | WP_063097562.1 | DUF945 domain-containing protein | - |
| RG59_RS25035 () | 10005..10457 | - | 453 | WP_001469955.1 | hypothetical protein | VF |
| RG59_RS25040 () | 10770..11006 | - | 237 | WP_012564985.1 | hypothetical protein | - |
| RG59_RS25045 () | 10970..11365 | + | 396 | WP_001137964.1 | relaxosome protein TraM | - |
| RG59_RS25050 () | 11524..12288 | + | 765 | WP_073553863.1 | hypothetical protein | - |
| RG59_RS25055 () | 12428..12577 | + | 150 | WP_001401982.1 | TraY domain-containing protein | - |
| RG59_RS25060 () | 12875..13246 | + | 372 | WP_000829448.1 | conjugal transfer protein TraA | - |
| RG59_RS25065 () | 13265..13564 | + | 300 | WP_000012423.1 | type IV conjugative transfer system protein TraL | - |
| RG59_RS25070 () | 13579..14157 | + | 579 | WP_000365872.1 | type IV conjugative transfer system protein TraE | - |
| RG59_RS25075 () | 14132..14911 | + | 780 | WP_000746392.1 | type-F conjugative transfer system secretin TraK | - |
| RG59_RS25080 () | 14904..16250 | + | 1347 | WP_073553864.1 | conjugal transfer protein TraB | - |
| RG59_RS25085 () | 16247..16780 | + | 534 | WP_000801207.1 | type IV conjugative transfer system lipoprotein TraV | - |
| RG59_RS25090 () | 16777..19416 | + | 2640 | WP_000138564.1 | type IV secretion system protein TraC | - |
| RG59_RS25095 () | 19395..19811 | + | 417 | WP_000361873.1 | type-F conjugative transfer system protein TrbI | - |
| RG59_RS25100 () | 19814..20038 | + | 225 | WP_000752802.1 | TraR/DksA C4-type zinc finger protein | - |
| RG59_RS25105 () | 20035..20652 | + | 618 | WP_000871842.1 | type-F conjugative transfer system protein TraW | - |
| RG59_RS25110 () | 20649..21647 | + | 999 | WP_000619924.1 | conjugal transfer pilus assembly protein TraU | - |
| RG59_RS25115 () | 21656..22141 | + | 486 | WP_073553865.1 | hypothetical protein | - |
| RG59_RS25120 () | 22317..22581 | + | 265 | Protein_32 | hypothetical protein | - |
| RG59_RS25125 () | 22568..22876 | + | 309 | WP_001026252.1 | conjugal transfer protein TrbD | - |
| RG59_RS25130 () | 23077..23649 | + | 573 | WP_041031396.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| RG59_RS25135 () | 23646..24059 | + | 414 | Protein_35 | conjugal transfer protein TraN | - |
| RG59_RS25140 () | 24248..25825 | - | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| RG59_RS25145 () | 26135..26695 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| RG59_RS25150 () | 26699..29665 | + | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| RG59_RS25155 () | 29699..31225 | + | 1527 | Protein_39 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| RG59_RS25160 () | 31227..32012 | + | 786 | WP_073553868.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| RG59_RS25165 () | 32030..32302 | + | 273 | WP_000196432.1 | hypothetical protein | - |
| RG59_RS25170 () | 32304..32879 | + | 576 | WP_073553869.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| RG59_RS25175 () | 32876..33265 | + | 390 | WP_001202474.1 | hypothetical protein | - |
| RG59_RS25180 () | 33331..34737 | + | 1407 | WP_012564993.1 | conjugal transfer protein TraH | - |
| RG59_RS25185 () | 34737..37625 | + | 2889 | WP_000063113.1 | conjugal transfer mating pair stabilization protein TraG | - |
| RG59_RS25190 () | 37639..38289 | + | 651 | WP_000015960.1 | hypothetical protein | - |
| RG59_RS25195 () | 38361..39098 | + | 738 | WP_000926074.1 | complement resistance protein TraT | - |
| RG59_RS25200 () | 39227..39919 | + | 693 | WP_073553870.1 | hypothetical protein | - |
| RG59_RS25205 () | 39926..40429 | + | 504 | WP_000456957.1 | DUF2726 domain-containing protein | - |
| RG59_RS25210 () | 40470..42656 | + | 2187 | WP_000099427.1 | type IV conjugative transfer system coupling protein TraD | - |
| RG59_RS25215 () | 42656..47872 | + | 5217 | WP_073553871.1 | Multifunctional conjugation protein TraI | Relaxase |
| RG59_RS25220 () | 47872..48624 | + | 753 | WP_000431203.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| RG59_RS25225 () | 48698..49255 | + | 558 | WP_073553872.1 | fertility inhibition protein FinO | - |
| RG59_RS25230 () | 49394..49606 | + | 213 | WP_073553873.1 | ANR family transcriptional regulator | - |
| RG59_RS25235 () | 49990..50589 | + | 600 | WP_073553874.1 | hypothetical protein | - |
| RG59_RS25240 () | 50758..50988 | + | 231 | WP_073553875.1 | hypothetical protein | - |
| RG59_RS25245 () | 51302..51562 | + | 261 | WP_000078108.1 | replication regulatory protein RepA | - |
| RG59_RS25250 () | 51624..51710 | - | 87 | WP_072135289.1 | replication protein RepA | - |
| RG59_RS25255 () | 51800..51874 | + | 75 | WP_032144212.1 | RepA leader peptide Tap | - |
| RG59_RS25260 () | 51867..52889 | + | 1023 | WP_000840962.1 | replication initiation protein | - |
| RG59_RS25265 () | 53029..53232 | + | 204 | Protein_61 | hypothetical protein | - |
| RG59_RS26710 () | 53177..53362 | - | 186 | WP_073553895.1 | hypothetical protein | - |
| RG59_RS25275 () | 53830..54159 | + | 330 | Protein_63 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| RG59_RS25280 () | 54140..54421 | + | 282 | WP_000780224.1 | helix-turn-helix transcriptional regulator | - |
| RG59_RS25290 () | 54566..54931 | - | 366 | WP_000124140.1 | hypothetical protein | - |
| RG59_RS26715 () | 54950..55024 | + | 75 | Protein_66 | IS66 family insertion sequence element accessory protein TnpB | - |
| RG59_RS25300 () | 55086..55277 | - | 192 | WP_032174713.1 | P fimbrial regulatory protein KS71A | VF |
| RG59_RS25305 () | 55496..55699 | + | 204 | WP_126633486.1 | hypothetical protein | - |
| RG59_RS25310 () | 55747..56070 | + | 324 | WP_000431569.1 | Major pilu subunit operon regulatory protein PapB | VF |
| RG59_RS25315 () | 56070..56615 | + | 546 | WP_000708866.1 | hypothetical protein | VF |
| RG59_RS25320 () | 56627..59065 | + | 2439 | WP_149026542.1 | Outer membrane usher protein YraJ | VF |
| RG59_RS25325 () | 59058..59834 | + | 777 | WP_001697781.1 | Chaperone protein FaeE | VF |
| RG59_RS25330 () | 59870..60361 | + | 492 | WP_053285762.1 | hypothetical protein | VF |
| RG59_RS25335 () | 60552..61334 | + | 783 | WP_073553878.1 | hypothetical protein | - |
| RG59_RS25340 () | 61543..62331 | + | 789 | WP_077898582.1 | hypothetical protein | - |
| RG59_RS25345 () | 62523..63320 | + | 798 | WP_053285765.1 | hypothetical protein | VF |
| RG59_RS25350 () | 63351..64115 | + | 765 | WP_053285766.1 | hypothetical protein | VF |
| RG59_RS26270 () | 64257..64530 | + | 274 | Protein_78 | hypothetical protein | - |
| RG59_RS25355 () | 64640..65002 | + | 363 | WP_077898585.1 | hypothetical protein | - |
| RG59_RS25360 () | 65002..65838 | + | 837 | WP_073553880.1 | hypothetical protein | - |
| RG59_RS25365 () | 66055..66195 | - | 141 | Protein_81 | transposase | - |
| RG59_RS26720 () | 66261..66458 | + | 198 | Protein_82 | IS3 family transposase ISCARN101 | Transposase |
| RG59_RS26725 () | 66513..66638 | + | 126 | Protein_83 | IS3 family transposase ISCARN101 | Transposase |
| RG59_RS25375 () | 66858..67259 | - | 402 | WP_149026544.1 | hypothetical protein | - |
| RG59_RS25380 () | 67305..67589 | - | 285 | WP_072135264.1 | helix-turn-helix domain-containing protein | - |
| RG59_RS25385 () | 67770..69311 | + | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| RG59_RS25390 () | 69326..70072 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| RG59_RS26280 () | 70159..70561 | + | 403 | Protein_88 | IS66 family transposase | - |
| RG59_RS26730 () | 70772..70954 | + | 183 | Protein_89 | hypothetical protein | - |
| RG59_RS25405 () | 71230..72708 | - | 1479 | WP_000119410.1 | anion permease | - |
| RG59_RS25410 () | 72756..74408 | - | 1653 | WP_012565217.1 | NAD-dependent malic enzyme | - |
| RG59_RS25415 () | 74491..75588 | - | 1098 | WP_077898583.1 | choloylglycine hydrolase family protein | - |
| RG59_RS25420 () | 75631..75849 | - | 219 | WP_001292878.1 | hypothetical protein | - |
| RG59_RS25425 () | 75998..76807 | + | 810 | Protein_94 | Diacetyl reductase [(S)-acetoin forming] | VF |
| RG59_RS25435 () | 77659..78888 | + | 1230 | WP_072135265.1 | IS66 family transposase IS679 | Transposase |
| RG59_RS25440 () | 79050..79466 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| RG59_RS25445 () | 79463..79693 | - | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| RG59_RS26290 () | 79671..79808 | - | 138 | WP_077248527.1 | toxin-antitoxin system, antitoxin component, AbrB family protein | - |
| RG59_RS25460 () | 79878..80320 | - | 443 | Protein_99 | IS3 family transposase ISEc25 | Transposase |
| RG59_RS26295 () | 80380..80621 | + | 242 | Protein_100 | hypothetical protein | - |
| RG59_RS25470 () | 80904..81788 | - | 885 | WP_000942222.1 | helix-turn-helix domain-containing protein | - |
| RG59_RS25475 () | 82073..82903 | + | 831 | WP_012565223.1 | Transposon Tn10 TetD protein | VF |
| RG59_RS25480 () | 82948..83766 | - | 819 | WP_072135267.1 | EAL domain-containing protein | - |
| RG59_RS25485 () | 84031..84708 | - | 678 | WP_073553897.1 | hypothetical protein | - |
| RG59_RS25490 () | 85280..87892 | - | 2613 | WP_073553882.1 | Outer membrane usher protein FimD | VF |
| RG59_RS25495 () | 87896..88687 | - | 792 | WP_106141718.1 | molecular chaperone | - |
| RG59_RS25500 () | 88632..89333 | - | 702 | WP_053285700.1 | molecular chaperone | - |
| RG59_RS25505 () | 89336..89902 | - | 567 | WP_053285701.1 | type 1 fimbrial protein | - |
| RG59_RS25510 () | 89934..90491 | - | 558 | WP_073553883.1 | type 1 fimbrial protein | - |
| RG59_RS25515 () | 90499..91209 | - | 711 | WP_001021260.1 | Chaperone protein FocC | VF |
| RG59_RS25520 () | 91276..91830 | - | 555 | WP_073553884.1 | type 1 fimbrial protein | - |
| RG59_RS25525 () | 92253..93296 | + | 1044 | WP_000279209.1 | anaerobic sulfite reductase subunit AsrA | - |
| RG59_RS25530 () | 93300..94118 | + | 819 | WP_012565200.1 | anaerobic sulfite reductase subunit AsrB | - |
| RG59_RS25535 () | 94129..95142 | + | 1014 | WP_000109848.1 | sulfite reductase subunit C | - |
| RG59_RS25540 () | 95336..95512 | - | 177 | Protein_115 | transposase domain-containing protein | - |
| RG59_RS25545 () | 95580..96032 | - | 453 | WP_072135268.1 | reverse transcriptase | - |
| RG59_RS25550 () | 96013..96263 | - | 251 | Protein_117 | Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase | VF |
| RG59_RS25555 () | 96386..96598 | - | 213 | WP_001030606.1 | hypothetical protein | - |
| RG59_RS26305 () | 96859..98121 | + | 1263 | Protein_119 | IS3 family transposase IS2 | Transposase |
| RG59_RS25585 () | 98309..99477 | - | 1169 | Protein_120 | hypothetical protein | - |
| RG59_RS25590 () | 99774..99968 | + | 195 | WP_071550061.1 | hypothetical protein | - |
| RG59_RS25595 () | 100009..100277 | + | 269 | Protein_122 | type II toxin-antitoxin system ParD family antitoxin | - |
| RG59_RS26310 () | 100393..100554 | + | 162 | WP_001440647.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| RG59_RS26735 () | 100678..100803 | + | 126 | WP_096445642.1 | transcriptional regulator | - |
| RG59_RS25610 () | 100924..101664 | + | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| RG59_RS25615 () | 101949..102926 | - | 978 | WP_012565206.1 | RepB family plasmid replication initiator protein | - |
| RG59_RS25625 () | 103336..103581 | - | 246 | Protein_127 | hypothetical protein | - |
| RG59_RS25630 () | 104111..105172 | + | 1062 | WP_073553888.1 | hypothetical protein | - |
| RG59_RS25640 () | 105809..106797 | - | 989 | Protein_129 | IS3 family transposase ISEc17 | Transposase |
| RG59_RS25645 () | 108465..109631 | + | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| RG59_RS25650 () | 109631..110602 | + | 972 | WP_073553889.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| RG59_RS25655 () | 111144..111322 | + | 179 | Protein_132 | fatty acid/phospholipid synthesis protein | - |
| RG59_RS25660 () | 111297..111766 | + | 470 | Protein_133 | DUF1472 domain-containing protein | - |
| RG59_RS25665 () | 111862..112164 | + | 303 | WP_014653258.1 | antirestriction protein | - |
| RG59_RS25670 () | 112211..112633 | + | 423 | WP_073553890.1 | DUF1380 family protein | - |
| RG59_RS25675 () | 112630..112821 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| RG59_RS25685 () | 112940..113307 | + | 368 | Protein_137 | hypothetical protein | - |
| RG59_RS26740 () | 113452..113571 | + | 120 | WP_073553898.1 | single-stranded DNA-binding protein | - |
| RG59_RS25695 () | 113795..114025 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| RG59_RS25700 () | 114077..115438 | + | 1362 | WP_073553891.1 | DUF3560 domain-containing protein | - |
| RG59_RS25705 () | 115486..116049 | + | 564 | WP_073553892.1 | class I SAM-dependent methyltransferase | - |
| RG59_RS26745 () | 116049..116357 | + | 309 | WP_149026547.1 | hypothetical protein | - |
| RG59_RS26750 () | 116305..116527 | + | 223 | Protein_143 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|