MGE detailed information
MGE type: Genomic_island MGE length: 9351 bp
Accession: NZ_CP010200 Location: 2945715..2955065 Organism: Escherichia coli strain M10 Replicon: chromosome
Accession: NZ_CP010200 Location: 2945715..2955065 Organism: Escherichia coli strain M10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG59_RS15345 () | 2942446..2943165 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| RG59_RS15350 () | 2943162..2944793 | - | 1632 | WP_001216460.1 | sensor histidine kinase | - |
| RG59_RS15355 () | 2944974..2945204 | + | 231 | WP_000371700.1 | (4Fe-4S)-binding protein | - |
| RG59_RS15360 () | 2945216..2945488 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| RG59_RS15370 () | 2945715..2946011 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| RG59_RS15375 () | 2946039..2946212 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| RG59_RS15380 () | 2946331..2947848 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| RG59_RS15385 () | 2948085..2949542 | - | 1458 | WP_000856834.1 | dipeptide/tripeptide permease DtpC | - |
| RG59_RS15390 () | 2949601..2951748 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| RG59_RS15395 () | 2951828..2953162 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| RG59_RS15400 () | 2953527..2955065 | - | 1539 | WP_001187183.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| RG59_RS15415 () | 2955864..2956439 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| RG59_RS15420 () | 2956476..2958173 | - | 1698 | WP_000068978.1 | protein-disulfide reductase DsbD | - |
| RG59_RS15425 () | 2958149..2958487 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| RG59_RS15430 () | 2958603..2959904 | - | 1302 | WP_000961957.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.007 |