MGE detailed information
MGE type: Prophage MGE length: 48651 bp
Accession: NZ_CP010191 Location: 3995066..4043716 Organism: Escherichia coli strain M8 Replicon: chromosome
Accession: NZ_CP010191 Location: 3995066..4043716 Organism: Escherichia coli strain M8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG57_RS20515 () | 3991848..3992981 | + | 1134 | WP_000837924.1 | porin OmpN | - |
| RG57_RS20520 () | 3993122..3993556 | + | 435 | WP_001082294.1 | universal stress protein UspF | - |
| RG57_RS27610 () | 3993821..3993994 | - | 174 | WP_001157925.1 | hypothetical protein | - |
| RG57_RS27320 () | 3994334..3994447 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| RG57_RS20525 () | 3994516..3994749 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| RG57_RS20530 () | 3995066..3995656 | + | 591 | WP_000078178.1 | recombinase family protein | - |
| RG57_RS20535 () | 3995754..3996329 | - | 576 | WP_001351719.1 | tail fiber assembly protein | - |
| RG57_RS20540 () | 3996329..3999400 | - | 3072 | WP_024251431.1 | prophage tail fiber N-terminal domain-containing protein | - |
| RG57_RS20545 () | 3999465..4000064 | - | 600 | WP_001230290.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| RG57_RS20550 () | 4000134..4003547 | - | 3414 | WP_073535226.1 | host specificity protein J | - |
| RG57_RS20555 () | 4003608..4004255 | - | 648 | WP_000741591.1 | tail assembly protein | - |
| RG57_RS20560 () | 4004153..4004896 | - | 744 | WP_001396591.1 | C40 family peptidase | - |
| RG57_RS20565 () | 4004902..4005600 | - | 699 | WP_001152432.1 | phage minor tail protein L | - |
| RG57_RS20570 () | 4005600..4005938 | - | 339 | WP_000024051.1 | phage tail protein | - |
| RG57_RS20575 () | 4005931..4009164 | - | 3234 | WP_073535227.1 | phage tail tape measure protein | - |
| RG57_RS20585 () | 4009638..4009997 | - | 360 | WP_012565075.1 | hypothetical protein | - |
| RG57_RS20590 () | 4010148..4011110 | - | 963 | WP_000094292.1 | hypothetical protein | - |
| RG57_RS20595 () | 4011137..4011529 | - | 393 | WP_000144678.1 | hypothetical protein | - |
| RG57_RS20600 () | 4011526..4011906 | - | 381 | WP_001029815.1 | hypothetical protein | - |
| RG57_RS20605 () | 4011907..4012290 | - | 384 | WP_000524260.1 | hypothetical protein | - |
| RG57_RS20610 () | 4012290..4012685 | - | 396 | WP_073535228.1 | protein singed | - |
| RG57_RS27615 () | 4012689..4012865 | - | 177 | WP_000908084.1 | hypothetical protein | - |
| RG57_RS20615 () | 4012908..4014047 | - | 1140 | WP_000918487.1 | hypothetical protein | - |
| RG57_RS20620 () | 4014146..4014910 | - | 765 | WP_000770042.1 | hypothetical protein | - |
| RG57_RS20625 () | 4015015..4016127 | - | 1113 | WP_001351715.1 | hypothetical protein | - |
| RG57_RS20630 () | 4016111..4017517 | - | 1407 | WP_000763704.1 | DUF4055 domain-containing protein | - |
| RG57_RS20635 () | 4017520..4018821 | - | 1302 | WP_000625348.1 | terminase family protein | - |
| RG57_RS20640 () | 4018802..4019896 | - | 1095 | WP_000089447.1 | terminase small subunit | - |
| RG57_RS20645 () | 4019900..4020151 | - | 252 | WP_000613571.1 | hypothetical protein | - |
| RG57_RS20650 () | 4020087..4021019 | - | 933 | WP_073535229.1 | hypothetical protein | - |
| RG57_RS20655 () | 4021012..4021803 | - | 792 | WP_001291094.1 | ParB/Srx family N-terminal domain-containing protein | - |
| RG57_RS20665 () | 4021941..4023398 | - | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| RG57_RS26840 () | 4023595..4023780 | - | 186 | WP_001228688.1 | prophage lysis lipoprotein RzoD | - |
| RG57_RS20675 () | 4023997..4024494 | - | 498 | WP_001135310.1 | lysozyme RrrD | - |
| RG57_RS20680 () | 4024494..4024709 | - | 216 | WP_000839565.1 | phage lysis protein EssD | - |
| RG57_RS20685 () | 4024961..4025335 | - | 375 | WP_001348108.1 | hypothetical protein | - |
| RG57_RS20690 () | 4025507..4025935 | - | 429 | WP_000506936.1 | cell envelope integrity protein TolA | - |
| RG57_RS20700 () | 4026980..4027522 | - | 543 | WP_000640161.1 | DUF1133 family protein | - |
| RG57_RS20705 () | 4027519..4027809 | - | 291 | WP_000247763.1 | DUF1364 domain-containing protein | - |
| RG57_RS20710 () | 4027809..4028408 | - | 600 | WP_073535231.1 | DUF1367 family protein | - |
| RG57_RS20715 () | 4028875..4029030 | - | 156 | WP_162857827.1 | type I toxin-antitoxin system toxin HokD | - |
| RG57_RS20720 () | 4029700..4031958 | - | 2259 | WP_033801850.1 | NACHT domain-containing protein | - |
| RG57_RS20725 () | 4032072..4032389 | - | 318 | Protein_3733 | DUF977 family protein | - |
| RG57_RS20730 () | 4032405..4033166 | - | 762 | WP_000450666.1 | DUF1627 domain-containing protein | - |
| RG57_RS20735 () | 4033189..4033935 | - | 747 | WP_000788768.1 | ATP-binding protein | - |
| RG57_RS20740 () | 4033942..4034799 | - | 858 | WP_001614419.1 | DUF1376 domain-containing protein | - |
| RG57_RS20745 () | 4034812..4035234 | - | 423 | WP_001610069.1 | hypothetical protein | - |
| RG57_RS20750 () | 4035231..4035485 | - | 255 | WP_001072340.1 | hypothetical protein | - |
| RG57_RS20755 () | 4035565..4035984 | + | 420 | WP_000233320.1 | helix-turn-helix domain-containing protein | - |
| RG57_RS20770 () | 4036417..4036572 | + | 156 | WP_001169151.1 | YdaF family protein | - |
| RG57_RS20775 () | 4036569..4037057 | - | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| RG57_RS20785 () | 4037499..4037720 | + | 222 | WP_000560223.1 | killing protein KilR | - |
| RG57_RS20790 () | 4037720..4037890 | + | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| RG57_RS20795 () | 4037965..4038240 | + | 276 | WP_000632297.1 | protein RacC | - |
| RG57_RS20800 () | 4038342..4040942 | + | 2601 | WP_073535232.1 | exodeoxyribonuclease VIII | - |
| RG57_RS20805 () | 4040935..4041744 | + | 810 | WP_000166319.1 | recombination protein RecT | - |
| RG57_RS20810 () | 4041801..4041995 | + | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| RG57_RS20815 () | 4041988..4042185 | + | 198 | WP_024170988.1 | DUF1187 family protein | - |
| - () | 4041994..4042160 | - | 167 | NuclAT_1 | - | Antitoxin Detail |
| - () | 4041994..4042160 | - | 167 | NuclAT_1 | - | Antitoxin Detail |
| - () | 4041994..4042160 | - | 167 | NuclAT_1 | - | Antitoxin Detail |
| - () | 4041994..4042160 | - | 167 | NuclAT_1 | - | Antitoxin Detail |
| RG57_RS20820 () | 4042264..4042479 | + | 216 | WP_000079604.1 | excisionase XisR | - |
| RG57_RS20825 () | 4042481..4043716 | + | 1236 | WP_000040852.1 | site-specific integrase | - |
| RG57_RS20830 () | 4043768..4044703 | + | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| RG57_RS20835 () | 4044832..4046205 | - | 1374 | WP_000123738.1 | ATP-dependent RNA helicase DbpA | - |
| RG57_RS20845 () | 4046683..4047666 | - | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| RG57_RS27780 () | 4047680..4047727 | - | 48 | WP_211180494.1 | protein YnaN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|