MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 123014 bp
Accession: NZ_CP010186 Location: 3181131..3304144 Organism: Escherichia coli strain M6 Replicon: chromosome
Accession: NZ_CP010186 Location: 3181131..3304144 Organism: Escherichia coli strain M6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG56_RS16605 () | 3176336..3177568 | - | 1233 | WP_073519477.1 | phosphoadenosine phosphosulfate reductase | - |
| RG56_RS16610 () | 3178070..3180751 | - | 2682 | WP_187655888.1 | DUF2726 domain-containing protein | - |
| RG56_RS16615 () | 3180992..3181171 | - | 180 | Protein_3020 | type VI secretion protein ImpA | - |
| RG56_RS16630 () | 3182523..3183077 | - | 555 | Protein_3022 | type VI secretion system ImpA family N-terminal domain-containing protein | - |
| RG56_RS16635 () | 3183132..3183437 | - | 306 | WP_073519475.1 | hypothetical protein | - |
| RG56_RS16640 () | 3183503..3185248 | - | 1746 | WP_123006585.1 | NERD domain-containing protein | - |
| RG56_RS16645 () | 3185426..3186001 | - | 576 | WP_157902009.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| RG56_RS29270 () | 3186545..3187141 | - | 597 | WP_187655889.1 | hypothetical protein | - |
| RG56_RS16660 () | 3187256..3187591 | - | 336 | WP_073519473.1 | DUF596 domain-containing protein | - |
| RG56_RS16665 () | 3187595..3196628 | - | 9034 | Protein_3028 | hemagglutinin repeat-containing protein | - |
| RG56_RS16670 () | 3196644..3197171 | - | 528 | WP_073519471.1 | toxin-activating lysine-acyltransferase | - |
| RG56_RS16675 () | 3197181..3198833 | - | 1653 | WP_073519850.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| RG56_RS16680 () | 3199473..3199679 | + | 207 | WP_073519470.1 | DUF4222 domain-containing protein | - |
| RG56_RS16685 () | 3199732..3199965 | - | 234 | WP_012908817.1 | hypothetical protein | - |
| RG56_RS16690 () | 3200061..3200684 | - | 624 | WP_012908816.1 | hypothetical protein | - |
| RG56_RS16700 () | 3200992..3201405 | - | 414 | WP_073519469.1 | hypothetical protein | - |
| RG56_RS16705 () | 3201402..3201785 | - | 384 | WP_024133111.1 | hypothetical protein | - |
| RG56_RS16710 () | 3202046..3202615 | - | 570 | WP_073519468.1 | inovirus Gp2 family protein | - |
| RG56_RS16725 () | 3203266..3203478 | - | 213 | WP_012908811.1 | hemolysin expression modulator Hha | - |
| RG56_RS16735 () | 3204179..3204385 | + | 207 | WP_001095912.1 | AlpA family transcriptional regulator | - |
| RG56_RS16740 () | 3204471..3205043 | + | 573 | WP_021564615.1 | hypothetical protein | - |
| RG56_RS16750 () | 3205252..3205353 | + | 102 | Protein_3040 | IS1 family transposase | - |
| RG56_RS16760 () | 3206539..3207558 | + | 1020 | WP_073519467.1 | transcriptional regulator | - |
| RG56_RS16765 () | 3207668..3208540 | + | 873 | WP_073528033.1 | GTPase family protein | - |
| RG56_RS16770 () | 3208912..3211758 | + | 2847 | WP_073527990.1 | Ag43/Cah family autotransporter adhesin | - |
| RG56_RS16775 () | 3212085..3212903 | + | 819 | WP_061892566.1 | DUF945 domain-containing protein | - |
| RG56_RS16785 () | 3213220..3213699 | + | 480 | WP_061892567.1 | antirestriction protein | - |
| RG56_RS16790 () | 3213715..3214191 | + | 477 | WP_041124171.1 | RadC family protein | - |
| RG56_RS16795 () | 3214254..3214475 | + | 222 | WP_000692323.1 | DUF987 domain-containing protein | - |
| RG56_RS16800 () | 3214494..3215138 | + | 645 | WP_073519465.1 | antitoxin of toxin-antitoxin stability system | - |
| RG56_RS16805 () | 3215188..3215556 | + | 369 | WP_012908802.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| RG56_RS16810 () | 3215645..3216022 | + | 378 | WP_073519464.1 | TA system toxin CbtA family protein | Toxin Detail |
| RG56_RS28830 () | 3216019..3216189 | + | 171 | Protein_3051 | hypothetical protein | - |
| RG56_RS28835 () | 3216244..3216441 | + | 198 | WP_089560254.1 | DUF957 domain-containing protein | - |
| RG56_RS16820 () | 3216526..3217086 | + | 561 | Protein_3053 | DUF4942 domain-containing protein | - |
| RG56_RS16825 () | 3217454..3217990 | - | 537 | WP_000942795.1 | GspM family type II secretion system protein YghD | - |
| RG56_RS16830 () | 3217992..3219170 | - | 1179 | WP_000094962.1 | type II secretion system protein GspL | - |
| RG56_RS16835 () | 3219167..3220144 | - | 978 | WP_000633238.1 | type II secretion system minor pseudopilin GspK | - |
| RG56_RS16840 () | 3220147..3220746 | - | 600 | WP_001255040.1 | type II secretion system minor pseudopilin GspJ | - |
| RG56_RS16845 () | 3220743..3221114 | - | 372 | WP_000820125.1 | type II secretion system minor pseudopilin GspI | - |
| RG56_RS16850 () | 3221111..3221674 | - | 564 | WP_001115140.1 | type II secretion system minor pseudopilin GspH | - |
| RG56_RS16855 () | 3221678..3222133 | - | 456 | WP_001087296.1 | type II secretion system major pseudopilin GspG | - |
| RG56_RS16860 () | 3222150..3223373 | - | 1224 | WP_001173453.1 | type II secretion system inner membrane protein GspF | - |
| RG56_RS16865 () | 3223373..3224866 | - | 1494 | WP_000249348.1 | type II secretion system ATPase GspE | - |
| RG56_RS16870 () | 3224866..3226926 | - | 2061 | WP_000498824.1 | type II secretion system secretin GspD | - |
| RG56_RS16875 () | 3226956..3227915 | - | 960 | WP_000135067.1 | type II secretion system protein GspC | - |
| RG56_RS16880 () | 3227933..3228343 | - | 411 | WP_001324279.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| RG56_RS16885 () | 3228409..3229218 | - | 810 | WP_001365924.1 | prepilin peptidase PppA | - |
| RG56_RS16890 () | 3229358..3233926 | - | 4569 | WP_077897953.1 | lipoprotein metalloprotease SslE | - |
| RG56_RS16905 () | 3234412..3236094 | - | 1683 | WP_000259303.1 | glycolate permease GlcA | - |
| RG56_RS16910 () | 3236450..3238621 | - | 2172 | WP_000084066.1 | malate synthase G | - |
| RG56_RS16915 () | 3238643..3239047 | - | 405 | WP_000853256.1 | protein GlcG | - |
| RG56_RS16920 () | 3239052..3240275 | - | 1224 | WP_001194682.1 | glycolate oxidase subunit GlcF | - |
| RG56_RS16925 () | 3240286..3241338 | - | 1053 | WP_000943059.1 | glycolate oxidase subunit GlcE | - |
| RG56_RS16930 () | 3241338..3242837 | - | 1500 | WP_000026117.1 | glycolate oxidase subunit GlcD | - |
| RG56_RS16935 () | 3243088..3243852 | + | 765 | WP_001297764.1 | transcriptional regulator GlcC | - |
| RG56_RS16940 () | 3243859..3245001 | - | 1143 | WP_000388786.1 | DNA-binding protein | - |
| RG56_RS16950 () | 3245372..3247093 | + | 1722 | WP_012565169.1 | fatty acyl-AMP ligase | - |
| RG56_RS16955 () | 3247090..3248004 | + | 915 | WP_001077143.1 | NAD-dependent epimerase/dehydratase family protein | - |
| RG56_RS16960 () | 3248036..3248284 | + | 249 | WP_000248097.1 | acyl carrier protein | - |
| RG56_RS16965 () | 3248284..3249456 | + | 1173 | WP_000524972.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| RG56_RS16970 () | 3249492..3250571 | - | 1080 | WP_073519459.1 | LPS export ABC transporter permease LptG | - |
| RG56_RS16975 () | 3250568..3251638 | - | 1071 | WP_000779661.1 | LPS export ABC transporter permease LptF | - |
| RG56_RS16980 () | 3251669..3252229 | - | 561 | WP_001299422.1 | YtfJ family protein | - |
| RG56_RS16985 () | 3252241..3253065 | - | 825 | WP_000984977.1 | hypothetical protein | - |
| RG56_RS16990 () | 3253065..3254414 | - | 1350 | WP_073519458.1 | lipopolysaccharide biosynthesis protein | - |
| RG56_RS16995 () | 3254460..3255218 | - | 759 | WP_000339512.1 | hypothetical protein | - |
| RG56_RS17000 () | 3255250..3255963 | - | 714 | WP_001076220.1 | thymidylate kinase | - |
| RG56_RS17005 () | 3256137..3256829 | + | 693 | WP_001190773.1 | thymidylate kinase | - |
| RG56_RS17010 () | 3256883..3258382 | - | 1500 | WP_000933296.1 | inorganic phosphate transporter PitB | - |
| RG56_RS17015 () | 3258674..3260533 | - | 1860 | WP_001297309.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| RG56_RS17020 () | 3260738..3261604 | + | 867 | WP_001298746.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| RG56_RS17030 () | 3261904..3262885 | + | 982 | Protein_3091 | IS110-like element IS621 family transposase | - |
| RG56_RS17040 () | 3263007..3263255 | - | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| RG56_RS17045 () | 3263268..3263609 | - | 342 | WP_000544953.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| RG56_RS17050 () | 3263602..3264090 | - | 489 | WP_000134014.1 | hydrogenase-2 assembly chaperone | - |
| RG56_RS17055 () | 3264083..3264577 | - | 495 | WP_001221953.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| RG56_RS17060 () | 3264577..3266280 | - | 1704 | WP_000083065.1 | hydrogenase 2 large subunit | - |
| RG56_RS17065 () | 3266277..3267455 | - | 1179 | WP_000017703.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| RG56_RS17070 () | 3267445..3268431 | - | 987 | WP_001081870.1 | hydrogenase 2 operon protein HybA | - |
| RG56_RS17075 () | 3268434..3269552 | - | 1119 | WP_000145410.1 | hydrogenase 2 small subunit | - |
| RG56_RS17085 () | 3269741..3270028 | - | 288 | WP_001059136.1 | DUF2623 domain-containing protein | - |
| RG56_RS17090 () | 3270147..3271034 | - | 888 | WP_001297303.1 | dienelactone hydrolase family protein | - |
| RG56_RS17095 () | 3271191..3272231 | + | 1041 | WP_000262150.1 | L-glyceraldehyde 3-phosphate reductase | - |
| RG56_RS17100 () | 3272271..3272765 | - | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| RG56_RS17105 () | 3272956..3273840 | + | 885 | WP_000018760.1 | NADP(+)-dependent aldehyde reductase | - |
| RG56_RS17115 () | 3274112..3274537 | - | 426 | WP_001240712.1 | TonB system transport protein ExbD | - |
| RG56_RS17120 () | 3274544..3275278 | - | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| RG56_RS17130 () | 3275529..3276716 | + | 1188 | WP_000763933.1 | cystathionine beta-lyase | - |
| RG56_RS17135 () | 3276856..3277515 | + | 660 | WP_000268419.1 | DedA family protein | - |
| RG56_RS17140 () | 3277555..3278454 | - | 900 | WP_000817717.1 | DNA-binding transcriptional regulator YqhC | - |
| RG56_RS17150 () | 3278648..3279811 | + | 1164 | WP_001058807.1 | alcohol dehydrogenase | - |
| RG56_RS17155 () | 3279916..3280743 | + | 828 | WP_000013149.1 | 2,5-didehydrogluconate reductase DkgA | - |
| RG56_RS17160 () | 3280943..3281869 | + | 927 | WP_000691598.1 | YbjP/YqhG family protein | - |
| RG56_RS17165 () | 3281920..3282177 | + | 258 | WP_000848528.1 | lipoprotein YqhH | - |
| RG56_RS17170 () | 3282220..3284439 | - | 2220 | WP_000095187.1 | YgiQ family radical SAM protein | - |
| RG56_RS17175 () | 3284550..3285962 | - | 1413 | WP_000059395.1 | cell division protein FtsP | - |
| RG56_RS17180 () | 3286037..3286774 | - | 738 | WP_000965712.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
| RG56_RS17190 () | 3287008..3289266 | - | 2259 | WP_001281881.1 | DNA topoisomerase IV subunit A | - |
| RG56_RS17200 () | 3289812..3290294 | - | 483 | WP_000183494.1 | transcriptional regulator | - |
| RG56_RS17205 () | 3290347..3290739 | - | 393 | WP_000712658.1 | OB fold stress tolerance protein YgiW | - |
| RG56_RS17210 () | 3290891..3291550 | + | 660 | WP_001221502.1 | two-component system response regulator QseB | - |
| RG56_RS17215 () | 3291547..3292896 | + | 1350 | WP_000673354.1 | two-component system sensor histidine kinase QseC | - |
| RG56_RS17220 () | 3292942..3293274 | - | 333 | WP_000912120.1 | DUF2645 family protein | - |
| RG56_RS17225 () | 3293593..3294174 | + | 582 | WP_000065430.1 | NADPH:quinone oxidoreductase MdaB | - |
| RG56_RS17230 () | 3294205..3294519 | + | 315 | WP_000958598.1 | antibiotic biosynthesis monooxygenase | - |
| RG56_RS17235 () | 3294567..3296459 | - | 1893 | WP_000195296.1 | DNA topoisomerase IV subunit B | - |
| RG56_RS17240 () | 3296488..3297069 | - | 582 | WP_000105733.1 | esterase YqiA | - |
| RG56_RS17245 () | 3297069..3297896 | - | 828 | WP_000444747.1 | 3',5'-cyclic-AMP phosphodiesterase | - |
| RG56_RS17250 () | 3297921..3298343 | - | 423 | WP_000833393.1 | DUF1249 family protein | - |
| RG56_RS17255 () | 3298344..3298973 | - | 630 | WP_000917117.1 | ADP-ribose diphosphatase | - |
| RG56_RS17260 () | 3299178..3300659 | + | 1482 | WP_000735278.1 | outer membrane channel protein TolC | - |
| RG56_RS17270 () | 3300807..3301478 | + | 672 | WP_000831543.1 | DUF1190 family protein | - |
| RG56_RS17275 () | 3301484..3302644 | + | 1161 | WP_000442860.1 | glutathionylspermidine synthase family protein | - |
| RG56_RS17280 () | 3302682..3303470 | - | 789 | WP_001299419.1 | 4,5-DOPA dioxygenase extradiol | - |
| RG56_RS17285 () | 3303613..3304386 | + | 774 | WP_073519457.1 | zinc transporter ZupT | - |
| RG56_RS29275 () | 3304444..3304614 | - | 171 | WP_000469266.1 | hypothetical protein | - |
| RG56_RS17295 () | 3304875..3305528 | - | 654 | WP_001076997.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| RG56_RS17300 () | 3305902..3306192 | + | 291 | WP_001297598.1 | ubiquinone biosynthesis accessory factor UbiK | - |
| RG56_RS17305 () | 3306475..3307026 | + | 552 | WP_001272149.1 | fimbrial-like protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|