MGE detailed information
MGE type: IScluster/Tn MGE length: 14835 bp
Accession: NZ_CP010184 Location: 19048..33882 Organism: Escherichia coli strain M3 Replicon: plasmid A
Accession: NZ_CP010184 Location: 19048..33882 Organism: Escherichia coli strain M3 Replicon: plasmid A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG55_RS26000 () | 16465..16863 | - | 399 | WP_046201812.1 | hypothetical protein | - |
| RG55_RS26005 () | 16875..17228 | - | 354 | WP_052734131.1 | hypothetical protein | - |
| RG55_RS26010 () | 17598..18017 | - | 420 | WP_046201814.1 | Exc2 family lipoprotein | - |
| RG55_RS28210 () | 18569..18961 | + | 393 | Protein_18 | hypothetical protein | - |
| RG55_RS26020 () | 19048..19698 | + | 651 | WP_000993925.1 | IS66 family transposase IS679 | Transposase |
| RG55_RS26025 () | 19698..20045 | + | 348 | WP_000623562.1 | IS66 family transposase ISCro1 | Transposase |
| RG55_RS26030 () | 20065..21636 | + | 1572 | WP_046201816.1 | IS66 family transposase ISCro1 | Transposase |
| RG55_RS26035 () | 21767..22189 | - | 423 | WP_046201817.1 | DUF1380 family protein | - |
| RG55_RS26040 () | 22236..22538 | - | 303 | WP_139108889.1 | antirestriction protein | - |
| RG55_RS28500 () | 22845..23564 | - | 720 | Protein_24 | hypothetical protein | - |
| RG55_RS26055 () | 23725..24894 | + | 1170 | WP_046201818.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| RG55_RS26060 () | 24934..25107 | + | 174 | Protein_26 | DUF4113 domain-containing protein | - |
| RG55_RS26065 () | 25248..26210 | - | 963 | WP_046201819.1 | ParB/RepB/Spo0J family partition protein | - |
| RG55_RS26070 () | 26207..27412 | - | 1206 | WP_000817642.1 | Plasmid partition protein A | VF |
| RG55_RS26080 () | 27786..27998 | + | 213 | WP_000402944.1 | hypothetical protein | - |
| RG55_RS26085 () | 28171..28422 | + | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| RG55_RS26090 () | 28419..28706 | + | 288 | WP_001270421.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| RG55_RS26095 () | 28720..28979 | + | 260 | Protein_32 | hypothetical protein | - |
| RG55_RS26100 () | 28992..29282 | + | 291 | WP_046201820.1 | hypothetical protein | - |
| RG55_RS28215 () | 29329..29696 | + | 368 | Protein_34 | IS3 family transposase ISKpn37 | Transposase |
| RG55_RS26120 () | 30340..31317 | + | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| RG55_RS26125 () | 31596..32336 | - | 741 | WP_046201823.1 | tyrosine-type recombinase/integrase | - |
| RG55_RS26130 () | 32457..32618 | - | 162 | WP_064756529.1 | hypothetical protein | - |
| RG55_RS27630 () | 32930..33882 | - | 953 | Protein_38 | IS630 family transposase ISSpu2 | Transposase |
| RG55_RS26155 () | 34345..34848 | - | 504 | WP_000450723.1 | hypothetical protein | - |
| RG55_RS26160 () | 35641..36117 | + | 477 | WP_000072543.1 | type VI secretion system contractile sheath small subunit | - |
| RG55_RS26165 () | 36120..37598 | + | 1479 | WP_000150697.1 | type VI secretion system contractile sheath large subunit | - |
| RG55_RS26170 () | 37608..38126 | + | 519 | WP_046201825.1 | hypothetical protein | - |
| RG55_RS26175 () | 38134..38556 | + | 423 | WP_046201826.1 | lysozyme family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|