MGE detailed information
MGE type: IScluster/Tn MGE length: 14835 bp
Accession: NZ_CP010181 Location: 19044..33878 Organism: Escherichia coli strain M1 Replicon: plasmid A
Accession: NZ_CP010181 Location: 19044..33878 Organism: Escherichia coli strain M1 Replicon: plasmid A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG54_RS26015 () | 16461..16859 | - | 399 | WP_046201812.1 | hypothetical protein | - |
| RG54_RS26020 () | 16871..17224 | - | 354 | WP_052734131.1 | hypothetical protein | - |
| RG54_RS28610 () | 17221..17475 | - | 255 | WP_046201813.1 | hypothetical protein | - |
| RG54_RS26025 () | 17594..18013 | - | 420 | WP_046201814.1 | Exc2 family lipoprotein | - |
| RG54_RS28185 () | 18565..18957 | + | 393 | Protein_19 | hypothetical protein | - |
| RG54_RS26035 () | 19044..19694 | + | 651 | WP_000993925.1 | IS66 family transposase IS679 | Transposase |
| RG54_RS26040 () | 19694..20041 | + | 348 | WP_000623562.1 | IS66 family transposase ISCro1 | Transposase |
| RG54_RS26045 () | 20061..21632 | + | 1572 | WP_046201816.1 | IS66 family transposase ISCro1 | Transposase |
| RG54_RS26050 () | 21763..22185 | - | 423 | WP_046201817.1 | DUF1380 family protein | - |
| RG54_RS26055 () | 22232..22534 | - | 303 | WP_139108889.1 | antirestriction protein | - |
| RG54_RS28465 () | 22841..23560 | - | 720 | Protein_25 | hypothetical protein | - |
| RG54_RS26070 () | 23721..24890 | + | 1170 | WP_046201818.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| RG54_RS26075 () | 24930..25103 | + | 174 | Protein_27 | DUF4113 domain-containing protein | - |
| RG54_RS26080 () | 25244..26206 | - | 963 | WP_046201819.1 | ParB/RepB/Spo0J family partition protein | - |
| RG54_RS26085 () | 26203..27408 | - | 1206 | WP_000817642.1 | Plasmid partition protein A | VF |
| RG54_RS26095 () | 27782..27994 | + | 213 | WP_000402944.1 | hypothetical protein | - |
| RG54_RS26100 () | 28167..28418 | + | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| RG54_RS26105 () | 28415..28702 | + | 288 | WP_001270421.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| RG54_RS26110 () | 28716..28975 | + | 260 | Protein_33 | hypothetical protein | - |
| RG54_RS26115 () | 28988..29278 | + | 291 | WP_046201820.1 | hypothetical protein | - |
| RG54_RS28190 () | 29325..29692 | + | 368 | Protein_35 | IS3 family transposase ISKpn37 | Transposase |
| RG54_RS26135 () | 30336..31313 | + | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| RG54_RS26140 () | 31592..32332 | - | 741 | WP_046201823.1 | tyrosine-type recombinase/integrase | - |
| RG54_RS26145 () | 32453..32614 | - | 162 | WP_064756529.1 | hypothetical protein | - |
| RG54_RS27600 () | 32926..33878 | - | 953 | Protein_39 | IS630 family transposase ISSpu2 | Transposase |
| RG54_RS26170 () | 34341..34844 | - | 504 | WP_000450723.1 | hypothetical protein | - |
| RG54_RS26175 () | 35637..36113 | + | 477 | WP_000072543.1 | type VI secretion system contractile sheath small subunit | - |
| RG54_RS26180 () | 36116..37594 | + | 1479 | WP_000150697.1 | type VI secretion system contractile sheath large subunit | - |
| RG54_RS26185 () | 37604..38122 | + | 519 | WP_046201825.1 | hypothetical protein | - |
| RG54_RS26190 () | 38130..38552 | + | 423 | WP_046201826.1 | lysozyme family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|