MGE detailed information
MGE type: Genomic_island MGE length: 11675 bp
Accession: NZ_CP010180 Location: 2178585..2190259 Organism: Escherichia coli strain M1 Replicon: chromosome
Accession: NZ_CP010180 Location: 2178585..2190259 Organism: Escherichia coli strain M1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG54_RS11470 () | 2174910..2176118 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| RG54_RS11475 () | 2176144..2177475 | - | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| RG54_RS11480 () | 2177497..2178486 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| RG54_RS11485 () | 2178585..2179523 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| RG54_RS28550 () | 2179838..2180056 | + | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| RG54_RS11495 () | 2180312..2180851 | + | 540 | WP_000675743.1 | hypothetical protein | - |
| RG54_RS11500 () | 2180873..2182060 | + | 1188 | WP_000075593.1 | YhaC family protein | - |
| RG54_RS11510 () | 2183083..2184228 | - | 1146 | WP_001299416.1 | glycerate 2-kinase | - |
| RG54_RS11515 () | 2184325..2185215 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| RG54_RS11520 () | 2185245..2186015 | - | 771 | WP_001058226.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| RG54_RS11525 () | 2186031..2187365 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| RG54_RS11530 () | 2187740..2189311 | + | 1572 | WP_001273766.1 | galactarate dehydratase | - |
| RG54_RS11535 () | 2189460..2189795 | + | 336 | WP_024251361.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| RG54_RS11540 () | 2189795..2190259 | + | 465 | WP_000347253.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| RG54_RS11545 () | 2190314..2191123 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| RG54_RS11555 () | 2191372..2192652 | + | 1281 | WP_000681910.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| RG54_RS11560 () | 2192675..2193148 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| RG54_RS11565 () | 2193159..2193938 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| RG54_RS11570 () | 2193928..2194806 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| RG54_RS11575 () | 2194824..2195258 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|