MGE detailed information
MGE type: Prophage MGE length: 49737 bp
Accession: NZ_CP010176 Location: 1215335..1265071 Organism: Escherichia coli strain H10 Replicon: chromosome
Accession: NZ_CP010176 Location: 1215335..1265071 Organism: Escherichia coli strain H10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG51_RS06310 () | 1210565..1211473 | + | 909 | WP_000885454.1 | LysR family transcriptional regulator | - |
| RG51_RS06320 () | 1211803..1212366 | + | 564 | WP_001046821.1 | DNA endonuclease SmrA | - |
| RG51_RS06325 () | 1212387..1213619 | - | 1233 | WP_001307164.1 | diguanylate cyclase DgcM | - |
| RG51_RS25885 () | 1213813..1213860 | + | 48 | WP_211180494.1 | protein YnaN | - |
| RG51_RS06330 () | 1213874..1214857 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| RG51_RS06340 () | 1215335..1216708 | + | 1374 | WP_000123745.1 | ATP-dependent RNA helicase DbpA | - |
| RG51_RS06345 () | 1216837..1217772 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| RG51_RS06350 () | 1217824..1219059 | - | 1236 | WP_000040858.1 | Release factor glutamine methyltransferase ; Integrase | Integrase |
| RG51_RS06355 () | 1219061..1219276 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| RG51_RS06360 () | 1219355..1219564 | - | 210 | WP_021565074.1 | double-strand break reduction protein RcbA | - |
| - () | 1219380..1219558 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1219380..1219558 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1219380..1219558 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1219380..1219558 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| RG51_RS06365 () | 1219557..1219751 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| RG51_RS06370 () | 1219808..1220617 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| RG51_RS06375 () | 1220610..1223210 | - | 2601 | WP_021565075.1 | exodeoxyribonuclease VIII | - |
| RG51_RS06380 () | 1223312..1223587 | - | 276 | WP_073470675.1 | hypothetical protein | - |
| RG51_RS06385 () | 1223662..1223832 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| RG51_RS06390 () | 1223832..1224053 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| RG51_RS06400 () | 1224495..1224983 | + | 489 | WP_032155212.1 | superinfection exclusion B family protein | - |
| RG51_RS06405 () | 1224980..1225135 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| RG51_RS06410 () | 1225146..1225325 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| RG51_RS06420 () | 1225568..1225987 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| RG51_RS06425 () | 1226067..1226321 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| RG51_RS06430 () | 1226318..1226740 | + | 423 | WP_000693803.1 | hypothetical protein | - |
| RG51_RS06435 () | 1226818..1227606 | + | 789 | WP_001396581.1 | hypothetical protein | - |
| RG51_RS06440 () | 1227613..1228359 | + | 747 | WP_000788970.1 | ATP-binding protein | - |
| RG51_RS06445 () | 1228382..1229131 | + | 750 | WP_021565077.1 | DUF1627 domain-containing protein | - |
| RG51_RS06450 () | 1229385..1231454 | + | 2070 | WP_032182078.1 | hypothetical protein | - |
| RG51_RS06455 () | 1231581..1231679 | + | 99 | WP_042054239.1 | Hok/Gef family protein | - |
| RG51_RS06465 () | 1232143..1232742 | + | 600 | WP_000940319.1 | DUF1367 family protein | - |
| RG51_RS06470 () | 1232742..1233032 | + | 291 | WP_000247763.1 | DUF1364 domain-containing protein | - |
| RG51_RS06475 () | 1233029..1233571 | + | 543 | WP_032182076.1 | DUF1133 family protein | - |
| RG51_RS06485 () | 1234617..1235045 | + | 429 | WP_000506936.1 | cell envelope integrity protein TolA | - |
| RG51_RS06490 () | 1235217..1235591 | + | 375 | WP_001348108.1 | hypothetical protein | - |
| RG51_RS06495 () | 1235843..1236058 | + | 216 | WP_000839565.1 | phage lysis protein EssD | - |
| RG51_RS06500 () | 1236058..1236555 | + | 498 | WP_032182072.1 | lysozyme RrrD | - |
| RG51_RS24945 () | 1236772..1236957 | + | 186 | WP_001228691.1 | prophage lysis lipoprotein RzoD | - |
| RG51_RS06510 () | 1237154..1238611 | + | 1458 | WP_024235095.1 | Trk system potassium transporter TrkG | - |
| RG51_RS06520 () | 1238749..1239542 | + | 794 | Protein_1170 | ParB N-terminal domain-containing protein | - |
| RG51_RS06525 () | 1239535..1240467 | + | 933 | WP_001204033.1 | hypothetical protein | - |
| RG51_RS06530 () | 1240403..1240654 | + | 252 | WP_000613571.1 | hypothetical protein | - |
| RG51_RS06535 () | 1240658..1241752 | + | 1095 | WP_000089446.1 | terminase small subunit | - |
| RG51_RS06540 () | 1241733..1243034 | + | 1302 | WP_000625347.1 | terminase family protein | - |
| RG51_RS06545 () | 1243037..1244443 | + | 1407 | WP_000763708.1 | DUF4055 domain-containing protein | - |
| RG51_RS06550 () | 1244427..1245539 | + | 1113 | WP_001317036.1 | hypothetical protein | - |
| RG51_RS06555 () | 1245644..1246408 | + | 765 | WP_000770038.1 | hypothetical protein | - |
| RG51_RS06560 () | 1246507..1247646 | + | 1140 | WP_000918487.1 | hypothetical protein | - |
| RG51_RS25750 () | 1247689..1247865 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| RG51_RS06565 () | 1247869..1248264 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| RG51_RS06570 () | 1248264..1248647 | + | 384 | WP_000524260.1 | hypothetical protein | - |
| RG51_RS06575 () | 1248648..1249028 | + | 381 | WP_001029815.1 | hypothetical protein | - |
| RG51_RS06580 () | 1249025..1249417 | + | 393 | WP_000673077.1 | hypothetical protein | - |
| RG51_RS06585 () | 1249444..1250406 | + | 963 | WP_000094292.1 | hypothetical protein | - |
| RG51_RS06590 () | 1250557..1250916 | + | 360 | WP_012565075.1 | hypothetical protein | - |
| RG51_RS06600 () | 1251388..1254621 | + | 3234 | WP_032182067.1 | phage tail tape measure protein | - |
| RG51_RS06605 () | 1254614..1254952 | + | 339 | WP_000024051.1 | phage tail protein | - |
| RG51_RS06610 () | 1254952..1255650 | + | 699 | WP_001152432.1 | phage minor tail protein L | - |
| RG51_RS06615 () | 1255656..1256399 | + | 744 | WP_032155200.1 | C40 family peptidase | - |
| RG51_RS06620 () | 1256336..1256944 | + | 609 | WP_019843089.1 | tail assembly protein | - |
| RG51_RS06625 () | 1257005..1260403 | + | 3399 | WP_073470678.1 | host specificity protein J | - |
| RG51_RS06630 () | 1260470..1261069 | + | 600 | WP_001619152.1 | hypothetical protein | VF |
| RG51_RS06635 () | 1261134..1264487 | + | 3354 | WP_072040289.1 | prophage tail fiber N-terminal domain-containing protein | - |
| RG51_RS06640 () | 1264487..1265071 | + | 585 | WP_073470679.1 | tail fiber assembly protein | - |
| RG51_RS06645 () | 1265145..1266476 | - | 1332 | WP_032252927.1 | sensor domain-containing diguanylate cyclase | - |
| RG51_RS06650 () | 1266932..1267789 | - | 858 | WP_000968125.1 | iron/manganese ABC transporter permease subunit SitD | - |
| RG51_RS06655 () | 1267786..1268643 | - | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| RG51_RS06660 () | 1268640..1269467 | - | 828 | WP_000983718.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|