MGE detailed information
MGE type: Genomic_island MGE length: 13173 bp
Accession: NZ_CP010169 Location: 3633844..3647016 Organism: Escherichia coli strain H5 Replicon: chromosome
Accession: NZ_CP010169 Location: 3633844..3647016 Organism: Escherichia coli strain H5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG47_RS18790 () | 3630659..3632344 | - | 1686 | WP_004015950.1 | ABC transporter ATP-binding protein/permease | - |
| RG47_RS25925 () | 3632547..3632669 | + | 123 | WP_122985823.1 | hypothetical protein | - |
| RG47_RS18795 () | 3632635..3633792 | - | 1158 | WP_001295683.1 | anaerobic sulfatase maturase | - |
| RG47_RS18800 () | 3633844..3635526 | - | 1683 | WP_001295684.1 | sulfatase | - |
| RG47_RS18805 () | 3635928..3636689 | - | 762 | WP_073464598.1 | acid stress response transcriptional regulator YdeO | - |
| RG47_RS18810 () | 3636764..3636961 | - | 198 | WP_000543385.1 | two-component system connector SafA | - |
| RG47_RS18815 () | 3637209..3639488 | - | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| RG47_RS18820 () | 3639822..3640736 | - | 915 | WP_000520664.1 | fimbrial protein | - |
| RG47_RS18825 () | 3640795..3641298 | - | 504 | WP_000825452.1 | type 1 fimbrial protein | - |
| RG47_RS18830 () | 3641311..3641841 | - | 531 | WP_000876763.1 | type 1 fimbrial protein | - |
| RG47_RS18835 () | 3641855..3642763 | - | 909 | WP_149025512.1 | fimbria/pilus outer membrane usher protein | - |
| RG47_RS18840 () | 3642841..3643551 | - | 711 | WP_073464595.1 | fimbria/pilus periplasmic chaperone | - |
| RG47_RS18845 () | 3643912..3644475 | - | 564 | WP_001296758.1 | type 1 fimbrial major subunit FimA | - |
| RG47_RS18850 () | 3644908..3645116 | - | 209 | Protein_3396 | helix-turn-helix transcriptional regulator | - |
| RG47_RS18860 () | 3645428..3646750 | - | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| RG47_RS18865 () | 3646750..3647016 | - | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.005 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.005 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.005 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.005 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.007 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.005 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.005 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.005 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.005 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.005 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.005 |