MGE detailed information
MGE type: Prophage MGE length: 38569 bp
Accession: NZ_CP010160 Location: 64890..103458 Organism: Escherichia coli strain H1 Replicon: chromosome
Accession: NZ_CP010160 Location: 64890..103458 Organism: Escherichia coli strain H1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG44_RS00295 () | 60209..60727 | + | 519 | WP_073544557.1 | 2-oxo-tetronate isomerase | - |
| RG44_RS00305 () | 60772..62817 | - | 2046 | WP_001619465.1 | peptidyl-dipeptidase Dcp | - |
| RG44_RS00315 () | 62954..63700 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| RG44_RS00320 () | 63789..64475 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| RG44_RS00325 () | 64652..64855 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| RG44_RS00330 () | 64890..66350 | - | 1461 | WP_073544558.1 | mannitol dehydrogenase family protein | - |
| RG44_RS00350 () | 66491..67188 | + | 698 | Protein_59 | IS1 family transposase IS1R | Transposase |
| RG44_RS00355 () | 67182..67913 | - | 732 | WP_073544559.1 | High frequency lysogenization protein HflD | VF |
| RG44_RS00365 () | 68320..69279 | - | 960 | WP_000592549.1 | DUF523 and DUF1722 domain-containing protein | - |
| RG44_RS00370 () | 69472..69996 | + | 525 | WP_000780584.1 | lipocalin family protein | - |
| RG44_RS00375 () | 70152..70529 | - | 378 | WP_001204787.1 | antitermination protein | - |
| RG44_RS00380 () | 70547..70753 | - | 207 | Protein_64 | DUF968 domain-containing protein | - |
| RG44_RS00385 () | 70787..71065 | - | 279 | WP_001515373.1 | hypothetical protein | - |
| RG44_RS00390 () | 71132..71383 | - | 252 | WP_001463433.1 | hypothetical protein | - |
| RG44_RS00395 () | 71600..71755 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| RG44_RS00400 () | 71827..72114 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| RG44_RS00405 () | 72114..72353 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| RG44_RS00410 () | 72378..72683 | + | 306 | WP_071593935.1 | hypothetical protein | - |
| RG44_RS00420 () | 72886..73218 | + | 333 | WP_001301033.1 | protein FlxA | - |
| RG44_RS00425 () | 73655..74995 | - | 1341 | WP_000589013.1 | ISNCY family transposase ISCARN112 | Transposase |
| RG44_RS00440 () | 75764..76050 | - | 287 | Protein_73 | hypothetical protein | - |
| RG44_RS27165 () | 76216..76398 | - | 183 | Protein_74 | hypothetical protein | - |
| RG44_RS00450 () | 76661..77017 | - | 357 | WP_001315552.1 | class I SAM-dependent methyltransferase | - |
| RG44_RS00455 () | 77014..77436 | - | 423 | WP_001151262.1 | DUF977 family protein | - |
| RG44_RS00460 () | 77477..78442 | - | 966 | WP_073544560.1 | hypothetical protein | - |
| RG44_RS00465 () | 78423..78944 | - | 522 | WP_000705355.1 | hypothetical protein | - |
| RG44_RS00470 () | 78928..79155 | - | 228 | WP_073544561.1 | transcriptional regulator | - |
| RG44_RS00475 () | 79237..79644 | + | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| RG44_RS00480 () | 79813..79968 | + | 156 | WP_000379588.1 | DUF1391 family protein | - |
| RG44_RS00490 () | 80128..80346 | + | 219 | WP_001171952.1 | hypothetical protein | - |
| RG44_RS00500 () | 80914..81102 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| RG44_RS00505 () | 81099..81290 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| RG44_RS00510 () | 81384..83855 | + | 2472 | WP_073544563.1 | exonuclease | - |
| RG44_RS00515 () | 83928..84179 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| RG44_RS00520 () | 84214..85494 | + | 1281 | WP_024201519.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| RG44_RS00525 () | 85514..85624 | - | 111 | WP_001360138.1 | hypothetical protein | - |
| RG44_RS00530 () | 85682..86701 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| RG44_RS00535 () | 86713..87927 | - | 1215 | WP_001619484.1 | starvation-sensing protein RspA | - |
| RG44_RS00545 () | 88133..88459 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| RG44_RS00550 () | 88594..88935 | + | 342 | WP_000705197.1 | DUF1283 family protein | - |
| RG44_RS00555 () | 88970..89530 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| RG44_RS00560 () | 89533..90243 | - | 711 | WP_072104773.1 | YnfC family lipoprotein | - |
| RG44_RS00565 () | 90351..90656 | + | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| RG44_RS00570 () | 90855..92267 | + | 1413 | Protein_96 | molybdopterin-dependent oxidoreductase | - |
| RG44_RS00575 () | 92811..93800 | - | 990 | WP_073545044.1 | hypothetical protein | - |
| RG44_RS00580 () | 93873..94364 | - | 492 | WP_073544565.1 | hypothetical protein | - |
| RG44_RS00590 () | 94681..95391 | - | 711 | WP_073544567.1 | hypothetical protein | - |
| RG44_RS00595 () | 96165..96899 | - | 735 | WP_050486085.1 | HNH endonuclease | - |
| RG44_RS00600 () | 97049..98659 | - | 1611 | WP_073544568.1 | Deoxyribodipyrimidine photo-lyase ; Integrase | Integrase |
| RG44_RS00605 () | 98642..99751 | + | 1110 | WP_077785974.1 | molybdopterin-dependent oxidoreductase | - |
| RG44_RS00610 () | 99812..101632 | + | 1821 | Protein_103 | molybdopterin-dependent oxidoreductase | - |
| RG44_RS26555 () | 101694..102845 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| RG44_RS00620 () | 102850..103458 | + | 609 | Protein_105 | dimethyl sulfoxide reductase subunit A | - |
| RG44_RS00625 () | 103469..104086 | + | 618 | WP_053271933.1 | dimethylsulfoxide reductase subunit B | - |
| RG44_RS00630 () | 104088..104942 | + | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| RG44_RS00635 () | 104985..105599 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| RG44_RS00640 () | 105758..107050 | + | 1293 | WP_073545047.1 | voltage-gated ClC-type chloride channel ClcB | - |
| RG44_RS00645 () | 107003..107698 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|