MGE detailed information
MGE type: Prophage MGE length: 76951 bp
Accession: NZ_CP010160 Location: 3349225..3426175 Organism: Escherichia coli strain H1 Replicon: chromosome
Accession: NZ_CP010160 Location: 3349225..3426175 Organism: Escherichia coli strain H1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG44_RS17820 () | 3344869..3345270 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| RG44_RS17825 () | 3345309..3346364 | - | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| RG44_RS17830 () | 3346652..3347755 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| RG44_RS17835 () | 3347767..3349020 | + | 1254 | WP_073544873.1 | glutamate-5-semialdehyde dehydrogenase | - |
| RG44_RS17845 () | 3349225..3350385 | - | 1161 | WP_000023575.1 | Porin B ; Integrase | Integrase |
| RG44_RS17850 () | 3350277..3350609 | - | 333 | Protein_3127 | helix-turn-helix domain-containing protein | - |
| RG44_RS17855 () | 3350961..3351128 | - | 168 | WP_000545737.1 | hypothetical protein | - |
| RG44_RS17860 () | 3351217..3351498 | - | 282 | WP_073544874.1 | hypothetical protein | - |
| RG44_RS17865 () | 3351613..3352185 | - | 573 | WP_073544875.1 | ead/Ea22-like family protein | - |
| RG44_RS17870 () | 3352182..3352772 | - | 591 | Protein_3131 | HNH endonuclease | - |
| RG44_RS17880 () | 3352990..3353568 | - | 579 | WP_016063198.1 | HNH endonuclease | - |
| RG44_RS17885 () | 3353555..3353731 | - | 177 | WP_001614322.1 | DUF2737 family protein | - |
| RG44_RS17890 () | 3353742..3354035 | - | 294 | WP_001111303.1 | DUF2856 family protein | - |
| RG44_RS17895 () | 3354059..3354442 | - | 384 | WP_000951325.1 | hypothetical protein | - |
| RG44_RS17900 () | 3354442..3355047 | - | 606 | WP_001404855.1 | ERF family protein | - |
| RG44_RS17910 () | 3355304..3355456 | - | 153 | WP_001243355.1 | host cell division inhibitory peptide Kil | - |
| RG44_RS17915 () | 3355441..3355572 | - | 132 | WP_000638547.1 | protease FtsH-inhibitory lysogeny factor CIII | - |
| RG44_RS17920 () | 3355597..3356565 | - | 969 | WP_073544876.1 | cell envelope biogenesis protein TolA | - |
| RG44_RS17925 () | 3356700..3356900 | - | 201 | WP_073545068.1 | hypothetical protein | - |
| RG44_RS17930 () | 3356900..3357178 | - | 279 | WP_073544877.1 | hypothetical protein | - |
| RG44_RS17935 () | 3357210..3357452 | - | 243 | WP_073544878.1 | hypothetical protein | - |
| RG44_RS27105 () | 3357656..3357826 | - | 171 | WP_187658844.1 | hypothetical protein | - |
| RG44_RS17945 () | 3357745..3358017 | - | 273 | WP_012817806.1 | hypothetical protein | - |
| RG44_RS17950 () | 3358538..3358834 | - | 297 | WP_000394871.1 | hypothetical protein | - |
| RG44_RS17955 () | 3358875..3359582 | - | 708 | WP_000846394.1 | helix-turn-helix transcriptional regulator | - |
| RG44_RS17960 () | 3359694..3359918 | + | 225 | WP_001054987.1 | helix-turn-helix domain-containing protein | - |
| RG44_RS17965 () | 3360028..3360306 | + | 279 | WP_015966855.1 | lambda phage CII family protein | - |
| RG44_RS27110 () | 3360341..3360502 | + | 162 | WP_000166961.1 | hypothetical protein | - |
| RG44_RS17970 () | 3360489..3361379 | + | 891 | WP_073544879.1 | DNA replication protein | - |
| RG44_RS17975 () | 3361369..3362805 | + | 1437 | WP_016063203.1 | AAA family ATPase | - |
| RG44_RS17985 () | 3363116..3363538 | + | 423 | WP_039022135.1 | hypothetical protein | - |
| RG44_RS17990 () | 3363535..3364062 | + | 528 | WP_073544881.1 | phage N-6-adenine-methyltransferase | - |
| RG44_RS17995 () | 3364059..3364235 | + | 177 | WP_001254255.1 | NinE family protein | - |
| RG44_RS18000 () | 3364238..3364648 | + | 411 | WP_187658845.1 | DUF2591 family protein | - |
| RG44_RS18005 () | 3364641..3364817 | + | 177 | WP_073544883.1 | protein ninF | - |
| RG44_RS18010 () | 3364810..3365421 | + | 612 | WP_073544884.1 | recombination protein NinG | - |
| RG44_RS18015 () | 3365418..3365624 | + | 207 | WP_073544885.1 | phage NinH family protein | - |
| RG44_RS18020 () | 3365602..3366273 | + | 672 | WP_021566244.1 | serine/threonine protein phosphatase | - |
| RG44_RS18025 () | 3366264..3366782 | + | 519 | WP_000512810.1 | DUF1133 family protein | - |
| RG44_RS18040 () | 3367244..3367567 | + | 324 | WP_000783734.1 | phage holin, lambda family | - |
| RG44_RS18045 () | 3367551..3368027 | + | 477 | WP_000229389.1 | glycoside hydrolase family protein | - |
| RG44_RS26805 () | 3368024..3368461 | + | 438 | WP_005760024.1 | lysis protein | - |
| RG44_RS26810 () | 3368449..3368601 | + | 153 | WP_149025948.1 | hypothetical protein | - |
| RG44_RS18060 () | 3369015..3369257 | + | 243 | WP_000807785.1 | DUF2560 family protein | - |
| RG44_RS18065 () | 3369260..3369697 | + | 438 | WP_025765985.1 | hypothetical protein | - |
| RG44_RS18070 () | 3369697..3371157 | + | 1461 | WP_048264270.1 | hypothetical protein | - |
| RG44_RS18075 () | 3371157..3373325 | + | 2169 | WP_073544887.1 | portal protein | - |
| RG44_RS18080 () | 3373339..3374250 | + | 912 | WP_073544888.1 | scaffolding protein | - |
| RG44_RS18085 () | 3374250..3375545 | + | 1296 | WP_073544889.1 | coat protein | - |
| RG44_RS18090 () | 3375590..3375850 | + | 261 | WP_024180326.1 | hypothetical protein | - |
| RG44_RS18095 () | 3375828..3376328 | + | 501 | WP_021514122.1 | hypothetical protein | - |
| RG44_RS18100 () | 3376329..3377747 | + | 1419 | WP_073544890.1 | packaged DNA stabilization protein gp10 | - |
| RG44_RS18105 () | 3377747..3378448 | + | 702 | WP_073544891.1 | phage tail protein | - |
| RG44_RS18110 () | 3378448..3378903 | + | 456 | WP_073544892.1 | DUF2824 family protein | - |
| RG44_RS18115 () | 3378906..3379598 | + | 693 | WP_000964852.1 | hypothetical protein | - |
| RG44_RS18120 () | 3379608..3380903 | + | 1296 | WP_073544893.1 | phage DNA ejection protein | - |
| RG44_RS18125 () | 3380903..3382900 | + | 1998 | WP_073544894.1 | DNA transfer protein | - |
| RG44_RS18130 () | 3382990..3383250 | - | 261 | WP_000287053.1 | Arc family DNA-binding protein | - |
| RG44_RS18135 () | 3383372..3383728 | + | 357 | Protein_3180 | phage tail protein | - |
| RG44_RS18140 () | 3385313..3387100 | - | 1788 | WP_073544895.1 | hypothetical protein | VF |
| RG44_RS18145 () | 3387296..3387472 | - | 177 | WP_073545069.1 | integrase | - |
| RG44_RS18150 () | 3387896..3388593 | - | 698 | Protein_3183 | IS1 family transposase IS1R | Transposase |
| RG44_RS18170 () | 3388627..3388935 | - | 309 | WP_073544645.1 | hypothetical protein | - |
| RG44_RS27270 () | 3389097..3389153 | + | 57 | WP_211180520.1 | protein YsgD | - |
| RG44_RS18180 () | 3389305..3390255 | + | 951 | WP_000947148.1 | magnesium/cobalt transporter CorA | - |
| RG44_RS18200 () | 3390387..3391084 | + | 698 | Protein_3187 | IS1 family transposase IS1R | Transposase |
| RG44_RS18205 () | 3391096..3391767 | - | 672 | Protein_3188 | hypothetical protein | - |
| RG44_RS18210 () | 3391777..3392850 | - | 1074 | WP_073544896.1 | HTH-type transcriptional regulator DmlR ; Integrase | Integrase |
| RG44_RS18215 () | 3393214..3394071 | + | 858 | WP_000523418.1 | hypothetical protein | - |
| RG44_RS18220 () | 3394193..3394465 | + | 273 | WP_073544897.1 | AlpA family phage regulatory protein | - |
| RG44_RS18225 () | 3394533..3395600 | + | 1068 | WP_001037132.1 | inovirus-type Gp2 protein | - |
| RG44_RS18230 () | 3395587..3396300 | + | 714 | WP_000119302.1 | hypothetical protein | - |
| RG44_RS18235 () | 3396822..3400064 | - | 3243 | WP_000919795.1 | DEAD/DEAH box helicase | - |
| RG44_RS18240 () | 3400064..3401146 | - | 1083 | Protein_3195 | hypothetical protein | - |
| RG44_RS18245 () | 3401190..3401894 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| RG44_RS18250 () | 3401958..3402251 | + | 294 | Protein_3197 | GGDEF domain-containing protein | - |
| RG44_RS18255 () | 3402349..3403659 | - | 1311 | WP_073544898.1 | guanine deaminase | - |
| RG44_RS18260 () | 3403761..3405257 | - | 1497 | WP_073544899.1 | NCS1 family nucleobase:cation symporter-1 | - |
| RG44_RS18265 () | 3405401..3406117 | + | 717 | WP_073544900.1 | GntR family transcriptional regulator | - |
| RG44_RS18270 () | 3406117..3406988 | + | 872 | Protein_3201 | allantoin racemase | - |
| RG44_RS18275 () | 3406873..3407805 | + | 933 | WP_065810083.1 | allantoinase PuuE | - |
| RG44_RS18280 () | 3407894..3408685 | - | 792 | WP_073544902.1 | sulfite exporter TauE/SafE family protein | - |
| RG44_RS18285 () | 3408795..3409562 | + | 768 | WP_073544903.1 | helix-turn-helix transcriptional regulator | - |
| RG44_RS18290 () | 3409766..3409990 | + | 225 | WP_073545071.1 | hypothetical protein | - |
| RG44_RS26270 () | 3410248..3410945 | - | 698 | Protein_3206 | IS1 family transposase | - |
| RG44_RS26275 () | 3411002..3412062 | - | 1061 | Protein_3207 | IS3 family transposase IS150 | Transposase |
| RG44_RS18315 () | 3412244..3412630 | - | 387 | WP_073544905.1 | oxalurate catabolism protein HpxZ | - |
| RG44_RS18320 () | 3412627..3414024 | - | 1398 | WP_073544906.1 | AtzE family amidohydrolase | - |
| RG44_RS18325 () | 3414021..3414206 | - | 186 | WP_004179955.1 | oxalurate catabolism protein HpxX | - |
| RG44_RS18330 () | 3414217..3415803 | - | 1587 | WP_073544907.1 | oxamate amidohydrolase | - |
| RG44_RS18335 () | 3415983..3416822 | + | 840 | WP_048991470.1 | MurR/RpiR family transcriptional regulator HpxU | - |
| RG44_RS18340 () | 3417037..3417822 | + | 786 | WP_004143665.1 | transporter substrate-binding domain-containing protein | - |
| RG44_RS18345 () | 3417832..3418497 | + | 666 | WP_004176117.1 | amino acid ABC transporter permease | - |
| RG44_RS18350 () | 3418497..3419153 | + | 657 | WP_073544908.1 | amino acid ABC transporter permease | - |
| RG44_RS18355 () | 3419134..3419871 | + | 738 | WP_004143660.1 | DNA-binding transcriptional activator DecR | VF |
| RG44_RS18360 () | 3419887..3421128 | + | 1242 | WP_004224900.1 | alanine--glyoxylate aminotransferase family protein | - |
| RG44_RS18365 () | 3421125..3422384 | + | 1260 | WP_073544909.1 | hypothetical protein | VF |
| RG44_RS18370 () | 3422417..3423394 | - | 978 | WP_004179941.1 | nitronate monooxygenase | - |
| RG44_RS18390 () | 3423652..3424349 | + | 698 | Protein_3220 | IS1 family transposase IS1R | Transposase |
| RG44_RS18395 () | 3424365..3424790 | - | 426 | Protein_3221 | IS3 family transposase ISEc48 | Transposase |
| RG44_RS18400 () | 3425496..3425837 | - | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| RG44_RS18405 () | 3425858..3426175 | - | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| RG44_RS18410 () | 3426194..3426415 | - | 222 | WP_001568590.1 | DUF987 domain-containing protein | - |
| RG44_RS18415 () | 3426424..3426900 | - | 477 | WP_000811693.1 | RadC family protein | - |
| RG44_RS18420 () | 3426916..3427374 | - | 459 | WP_000211838.1 | antirestriction protein | - |
| RG44_RS18425 () | 3427472..3427711 | - | 240 | WP_000194654.1 | DUF905 domain-containing protein | - |
| RG44_RS18430 () | 3427788..3428255 | - | 468 | WP_001385283.1 | hypothetical protein | - |
| RG44_RS18435 () | 3428278..3428721 | - | 444 | WP_000649865.1 | hypothetical protein | - |
| RG44_RS18440 () | 3428721..3428957 | - | 237 | WP_001144031.1 | hypothetical protein | - |
| RG44_RS18445 () | 3428998..3429699 | - | 702 | WP_000189411.1 | WYL domain-containing protein | - |
| RG44_RS18450 () | 3429916..3430737 | - | 822 | WP_000197387.1 | DUF945 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|