MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 43671 bp
Accession: NZ_CP010157 Location: 5066443..5110113 Organism: Escherichia coli strain D10 Replicon: chromosome
Accession: NZ_CP010157 Location: 5066443..5110113 Organism: Escherichia coli strain D10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG43_RS26735 () | 5062751..5063893 | + | 1143 | WP_001318038.1 | hypothetical protein | - |
| RG43_RS26740 () | 5063900..5064664 | - | 765 | WP_001314155.1 | transcriptional regulator GlcC | - |
| RG43_RS26745 () | 5064915..5066414 | + | 1500 | WP_001696208.1 | glycolate oxidase subunit GlcD | - |
| RG43_RS26750 () | 5066414..5067466 | + | 1053 | WP_039005238.1 | glycolate oxidase subunit GlcE | - |
| RG43_RS26755 () | 5067477..5068700 | + | 1224 | WP_001194810.1 | glycolate oxidase subunit GlcF | - |
| RG43_RS26760 () | 5068705..5069109 | + | 405 | WP_000853256.1 | protein GlcG | - |
| RG43_RS26765 () | 5069131..5071302 | + | 2172 | WP_000084114.1 | malate synthase G | - |
| RG43_RS26770 () | 5071658..5073340 | + | 1683 | WP_000259302.1 | glycolate permease GlcA | - |
| RG43_RS26780 () | 5073825..5078381 | + | 4557 | WP_001034482.1 | hypothetical protein | VF |
| RG43_RS26785 () | 5078545..5079354 | + | 810 | WP_001318036.1 | hypothetical protein | VF |
| RG43_RS26790 () | 5079420..5079830 | + | 411 | WP_001298257.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| RG43_RS26795 () | 5079848..5080807 | + | 960 | WP_001696202.1 | hypothetical protein | VF |
| RG43_RS26800 () | 5080837..5082897 | + | 2061 | WP_001318034.1 | hypothetical protein | VF |
| RG43_RS26805 () | 5082897..5084390 | + | 1494 | WP_000249319.1 | hypothetical protein | VF |
| RG43_RS26810 () | 5084390..5085613 | + | 1224 | WP_001173415.1 | hypothetical protein | VF |
| RG43_RS26815 () | 5085630..5086085 | + | 456 | WP_001087296.1 | hypothetical protein | VF |
| RG43_RS26820 () | 5086089..5086652 | + | 564 | WP_001115149.1 | hypothetical protein | VF |
| RG43_RS26825 () | 5086649..5087020 | + | 372 | WP_000820091.1 | hypothetical protein | VF |
| RG43_RS26830 () | 5087017..5087622 | + | 606 | WP_001318033.1 | hypothetical protein | VF |
| RG43_RS26835 () | 5087619..5088596 | + | 978 | WP_073506912.1 | hypothetical protein | VF |
| RG43_RS26840 () | 5088593..5089771 | + | 1179 | WP_000097200.1 | hypothetical protein | VF |
| RG43_RS26845 () | 5089773..5090309 | + | 537 | WP_000942807.1 | hypothetical protein | VF |
| RG43_RS26850 () | 5090589..5091431 | - | 843 | WP_039004748.1 | DUF4942 domain-containing protein | - |
| RG43_RS29310 () | 5091516..5091713 | - | 198 | WP_023563519.1 | DUF957 domain-containing protein | - |
| RG43_RS29315 () | 5091789..5091938 | - | 150 | Protein_4786 | hypothetical protein | - |
| RG43_RS26860 () | 5091935..5092312 | - | 378 | WP_057109034.1 | TA system toxin CbtA family protein | Toxin Detail |
| RG43_RS26865 () | 5092402..5092770 | - | 369 | WP_065793167.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| RG43_RS26875 () | 5092933..5093154 | - | 222 | WP_000692303.1 | DUF987 domain-containing protein | - |
| RG43_RS26880 () | 5093217..5093693 | - | 477 | WP_001186710.1 | RadC family protein | - |
| RG43_RS26885 () | 5093709..5094188 | - | 480 | WP_057109036.1 | antirestriction protein | - |
| RG43_RS29535 () | 5094288..5094428 | + | 141 | WP_000997937.1 | hypothetical protein | - |
| RG43_RS26895 () | 5094454..5095272 | - | 819 | WP_001175153.1 | DUF945 domain-containing protein | - |
| RG43_RS26900 () | 5095362..5095595 | - | 234 | WP_001278287.1 | DUF905 family protein | - |
| RG43_RS26905 () | 5095601..5096278 | - | 678 | WP_001097305.1 | hypothetical protein | - |
| RG43_RS26910 () | 5096426..5097106 | - | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| RG43_RS26920 () | 5097309..5098193 | - | 885 | WP_001116802.1 | 50S ribosome-binding GTPase | - |
| RG43_RS26930 () | 5098294..5099517 | + | 1224 | WP_073507067.1 | hypothetical protein | - |
| RG43_RS26940 () | 5100681..5101211 | - | 531 | WP_000778605.1 | hypothetical protein | - |
| RG43_RS26950 () | 5101881..5102612 | + | 732 | WP_001075491.1 | inovirus Gp2 family protein | - |
| RG43_RS26970 () | 5104144..5106192 | + | 2049 | WP_000792543.1 | TonB-dependent siderophore receptor IreA | - |
| RG43_RS26975 () | 5106372..5107536 | - | 1165 | Protein_4803 | IS256 family transposase ISSod4 | Transposase |
| RG43_RS28585 () | 5107574..5108787 | + | 1214 | Protein_4804 | IS3 family transposase | - |
| RG43_RS26995 () | 5109923..5110489 | + | 567 | WP_001126822.1 | inovirus-type Gp2 protein | - |
| RG43_RS27000 () | 5110747..5111319 | + | 573 | WP_000991576.1 | hypothetical protein | - |
| RG43_RS27005 () | 5111388..5111624 | + | 237 | WP_000958152.1 | AlpA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|