MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 39406 bp
Accession: NZ_CP010155 Location: 1..39406 Organism: Escherichia coli strain D9 Replicon: plasmid C
Accession: NZ_CP010155 Location: 1..39406 Organism: Escherichia coli strain D9 Replicon: plasmid C
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG42_RS25415 () | 10..234 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| RG42_RS25420 () | 445..1938 | + | 1494 | WP_015344975.1 | IS91 family transposase ISVsa3 | Transposase |
| RG42_RS26970 () | 2400..2846 | + | 447 | Protein_2 | DUF3363 domain-containing protein | - |
| RG42_RS25435 () | 3063..4277 | + | 1215 | WP_058100717.1 | Bicyclomycin resistance protein | ARG |
| RG42_RS25440 () | 4305..4610 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| RG42_RS26655 () | 4722..4883 | + | 162 | Protein_5 | IS91 family transposase | - |
| RG42_RS25450 () | 4972..5928 | + | 957 | WP_063609966.1 | IS21 family transposase ISEc57 | Transposase |
| RG42_RS25455 () | 5965..6669 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| RG42_RS25460 () | 6713..7906 | + | 1194 | Protein_8 | topoisomerase C-terminal repeat-containing protein | - |
| RG42_RS25465 () | 7918..8367 | + | 450 | WP_001282381.1 | H-NS histone family protein | - |
| RG42_RS25470 () | 8430..8834 | + | 405 | WP_000059893.1 | hypothetical protein | - |
| RG42_RS25475 () | 9202..9840 | - | 639 | WP_038976852.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| RG42_RS25480 () | 10126..10746 | + | 621 | WP_000864791.1 | ParA family protein | - |
| RG42_RS25485 () | 10798..11028 | + | 231 | WP_000051064.1 | partitioning protein | - |
| RG42_RS25490 () | 11044..11337 | + | 294 | WP_015060510.1 | hypothetical protein | - |
| RG42_RS25495 () | 11339..12307 | + | 969 | WP_077249520.1 | IS5 family transposase IS903B | Transposase |
| RG42_RS25500 () | 12367..12789 | - | 423 | WP_031942371.1 | DNA distortion polypeptide 3 | - |
| RG42_RS25505 () | 12857..13303 | - | 447 | WP_001074386.1 | hypothetical protein | - |
| RG42_RS25510 () | 13343..14179 | - | 837 | WP_001050931.1 | replication initiation protein | - |
| RG42_RS25520 () | 15435..15686 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| RG42_RS25525 () | 15676..15957 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| RG42_RS25530 () | 16103..16426 | + | 324 | WP_001181903.1 | hypothetical protein | - |
| RG42_RS25535 () | 16471..16716 | + | 246 | WP_000356546.1 | hypothetical protein | - |
| RG42_RS25540 () | 16706..16921 | + | 216 | WP_001180116.1 | hypothetical protein | - |
| RG42_RS25545 () | 17014..17343 | + | 330 | WP_000866648.1 | hypothetical protein | - |
| RG42_RS26820 () | 17630..17779 | + | 150 | WP_000003880.1 | hypothetical protein | - |
| RG42_RS25550 () | 17792..18064 | + | 273 | WP_000160399.1 | hypothetical protein | - |
| RG42_RS25555 () | 18391..18936 | + | 546 | WP_038976855.1 | hypothetical protein | - |
| RG42_RS25560 () | 18939..20096 | + | 1158 | WP_000538023.1 | hypothetical protein | - |
| RG42_RS25565 () | 20457..20948 | + | 492 | WP_000872475.1 | transcription termination factor NusG | - |
| RG42_RS25575 () | 21173..21817 | + | 645 | WP_000953539.1 | Type IV secretion system protein virB1 | VF |
| RG42_RS25580 () | 21801..22091 | + | 291 | WP_000921916.1 | TrbC/VirB2 family protein | - |
| RG42_RS25585 () | 22115..24874 | + | 2760 | WP_000108725.1 | Type IV secretion system protein virB4 | VF |
| RG42_RS25590 () | 24876..25613 | + | 738 | WP_000737859.1 | pilus assembly protein | - |
| RG42_RS25595 () | 25623..25883 | + | 261 | WP_001228869.1 | EexN family lipoprotein | - |
| RG42_RS25600 () | 25895..26950 | + | 1056 | WP_000235774.1 | type IV secretion system protein | - |
| RG42_RS25605 () | 27140..27862 | + | 723 | WP_000394570.1 | Type IV secretion system protein PtlE | VF |
| RG42_RS25610 () | 27868..28797 | + | 930 | WP_000776689.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| RG42_RS25615 () | 28794..30008 | + | 1215 | WP_073503517.1 | Type IV secretion system protein virB10 | VF |
| RG42_RS25620 () | 30026..31063 | + | 1038 | WP_000217791.1 | Type IV secretion system protein PtlH | VF |
| RG42_RS25625 () | 31068..32903 | + | 1836 | WP_000053826.1 | type IV secretory system conjugative DNA transfer family protein | - |
| RG42_RS25630 () | 32900..33295 | + | 396 | WP_000733627.1 | cag pathogenicity island Cag12 family protein | - |
| RG42_RS25635 () | 33421..33630 | + | 210 | WP_073503548.1 | hypothetical protein | - |
| RG42_RS25640 () | 33873..34688 | + | 816 | WP_000018321.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| RG42_RS25645 () | 34765..35640 | + | 876 | WP_073503518.1 | SDR family oxidoreductase | - |
| RG42_RS25650 () | 35732..36094 | + | 363 | WP_074014172.1 | Methionine import ATP-binding protein MetN 2 | VF |
| RG42_RS25655 () | 36106..36810 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| RG42_RS25660 () | 36756..37415 | - | 660 | WP_077898834.1 | SprT-like domain-containing protein | - |
| RG42_RS25665 () | 37699..38355 | - | 657 | WP_012537714.1 | Pentapeptide repeat protein | ARG |
| RG42_RS25675 () | 38639..39343 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|