MGE detailed information
MGE type: Genomic_island MGE length: 17631 bp
Accession: NZ_CP010151 Location: 3292880..3310510 Organism: Escherichia coli strain D8 Replicon: chromosome
Accession: NZ_CP010151 Location: 3292880..3310510 Organism: Escherichia coli strain D8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG41_RS17030 () | 3288085..3290721 | - | 2637 | WP_000120954.1 | fimbrial usher FimD | - |
| RG41_RS17035 () | 3290787..3291512 | - | 726 | WP_000066559.1 | type 1 fimbria chaperone FimC | - |
| RG41_RS17040 () | 3291549..3292088 | - | 540 | WP_000824099.1 | type 1 fimbrial protein | - |
| RG41_RS17045 () | 3292153..3292701 | - | 549 | WP_074434947.1 | type 1 fimbrial major subunit FimA | - |
| RG41_RS17050 () | 3292880..3293476 | - | 597 | WP_000044708.1 | Dual-specificity RNA methyltransferase RlmN | VF |
| RG41_RS17055 () | 3293954..3294556 | - | 603 | WP_001519310.1 | Cytoskeleton protein RodZ | VF |
| RG41_RS17065 () | 3296020..3296736 | + | 717 | WP_001519309.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| RG41_RS17070 () | 3296756..3297862 | + | 1107 | WP_001519308.1 | N-acetylneuraminate epimerase | - |
| RG41_RS17075 () | 3297927..3298907 | + | 981 | WP_001519307.1 | transposase | - |
| RG41_RS17085 () | 3299490..3300731 | - | 1242 | Protein_3080 | helicase YjhR | - |
| RG41_RS17090 () | 3300794..3301093 | + | 300 | WP_001519304.1 | GNAT family N-acetyltransferase | - |
| RG41_RS17095 () | 3301470..3301727 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| RG41_RS17100 () | 3301739..3302290 | + | 552 | WP_001519303.1 | N-acetyltransferase | Antitoxin Detail |
| RG41_RS28040 () | 3302342..3302503 | + | 162 | WP_001519302.1 | hypothetical protein | - |
| RG41_RS17105 () | 3302540..3303088 | + | 549 | WP_001519301.1 | hypothetical protein | - |
| RG41_RS17110 () | 3303215..3303475 | + | 261 | WP_000084876.1 | hypothetical protein | - |
| RG41_RS28215 () | 3303513..3303629 | + | 117 | Protein_3087 | VOC family protein | - |
| RG41_RS17120 () | 3303874..3304995 | + | 1122 | WP_000010833.1 | M42 family metallopeptidase | - |
| RG41_RS17125 () | 3304992..3305270 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| RG41_RS17130 () | 3305282..3306595 | + | 1314 | WP_001519300.1 | galactitol-specific PTS transporter subunit IIC | - |
| RG41_RS17135 () | 3306608..3307414 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| RG41_RS17140 () | 3307545..3307976 | + | 432 | WP_000606405.1 | PTS sugar transporter subunit IIA | - |
| RG41_RS17145 () | 3307988..3308620 | + | 633 | WP_000600624.1 | ribulose-phosphate 3 epimerase family protein | - |
| RG41_RS17150 () | 3308637..3309419 | + | 783 | WP_000082779.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| RG41_RS17155 () | 3309722..3310510 | + | 789 | WP_000251800.1 | IclR family transcriptional regulator | - |
| RG41_RS17160 () | 3310515..3311420 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| RG41_RS17165 () | 3311431..3313398 | + | 1968 | WP_000116327.1 | xylonate dehydratase YjhG | - |
| RG41_RS17170 () | 3313505..3314854 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|