MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 38920 bp
Accession: NZ_CP010151 Location: 274193..313112 Organism: Escherichia coli strain D8 Replicon: chromosome
Accession: NZ_CP010151 Location: 274193..313112 Organism: Escherichia coli strain D8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG41_RS01310 () | 269585..270223 | - | 639 | WP_001278992.1 | aldolase | - |
| RG41_RS01315 () | 270220..271482 | - | 1263 | WP_000590416.1 | four-carbon acid sugar kinase family protein | - |
| RG41_RS01320 () | 271479..272387 | - | 909 | WP_000847998.1 | NAD(P)-dependent oxidoreductase | - |
| RG41_RS01325 () | 272583..273350 | + | 768 | WP_001298167.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| RG41_RS01330 () | 273401..274057 | - | 657 | WP_001141304.1 | protein-serine/threonine phosphatase | - |
| RG41_RS01335 () | 274163..276730 | - | 2568 | WP_001467843.1 | DNA mismatch repair protein MutS | - |
| RG41_RS01340 () | 276877..278334 | + | 1458 | WP_000784515.1 | hypothetical protein ; Integrase | Integrase |
| RG41_RS01345 () | 278346..278930 | + | 585 | WP_001272879.1 | hypothetical protein | - |
| RG41_RS01350 () | 279090..280073 | + | 984 | WP_000020904.1 | hypothetical protein | - |
| RG41_RS01355 () | 280198..280713 | - | 516 | WP_000611155.1 | MarR family transcriptional regulator | - |
| RG41_RS01360 () | 281626..282051 | + | 426 | WP_000336170.1 | hypothetical protein | - |
| RG41_RS01370 () | 282636..283835 | - | 1200 | WP_001536248.1 | relaxase/mobilization nuclease domain-containing protein | - |
| RG41_RS01375 () | 283804..284241 | - | 438 | WP_001536247.1 | hypothetical protein | - |
| RG41_RS01380 () | 284503..286311 | + | 1809 | WP_000710784.1 | DUF4209 domain-containing protein | - |
| RG41_RS01385 () | 287383..287727 | + | 345 | WP_000015482.1 | nitrous oxide-stimulated promoter family protein | - |
| RG41_RS01390 () | 287766..288194 | - | 429 | WP_000301062.1 | TOBE domain-containing protein | - |
| RG41_RS01395 () | 288239..290317 | - | 2079 | WP_000122674.1 | Anaerobic nitric oxide reductase transcription regulator NorR | VF |
| RG41_RS01400 () | 290391..291401 | - | 1011 | WP_001059916.1 | hydrogenase maturation carbamoyl dehydratase HypE | - |
| RG41_RS01405 () | 291398..292519 | - | 1122 | WP_001212967.1 | hydrogenase formation protein HypD | - |
| RG41_RS01410 () | 292519..292791 | - | 273 | WP_000334881.1 | hydrogenase 3 maturation protein HypC | - |
| RG41_RS01415 () | 292782..293654 | - | 873 | WP_000337654.1 | hydrogenase nickel incorporation protein HypB | - |
| RG41_RS01420 () | 293658..294008 | - | 351 | WP_001299100.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| RG41_RS01425 () | 294220..294681 | + | 462 | WP_000158056.1 | formate hydrogenlyase regulator HycA | - |
| RG41_RS01435 () | 294806..295417 | + | 612 | WP_001079173.1 | formate hydrogenlyase subunit HycB | - |
| RG41_RS01440 () | 295414..297240 | + | 1827 | WP_001274429.1 | formate hydrogenlyase subunit 3 | - |
| RG41_RS01445 () | 297243..298166 | + | 924 | WP_000115226.1 | formate hydrogenlyase subunit HycD | - |
| RG41_RS01450 () | 298184..299893 | + | 1710 | WP_001288123.1 | formate hydrogenlyase subunit HycE | - |
| RG41_RS01455 () | 299903..300445 | + | 543 | WP_000493800.1 | formate hydrogenlyase subunit HycF | - |
| RG41_RS01460 () | 300445..301212 | + | 768 | WP_000067399.1 | formate hydrogenlyase subunit HycG | - |
| RG41_RS01465 () | 301209..301619 | + | 411 | WP_001291918.1 | formate hydrogenlyase assembly protein HycH | - |
| RG41_RS01470 () | 301612..302079 | + | 468 | WP_000132955.1 | hydrogenase maturation peptidase HycI | - |
| RG41_RS01475 () | 302122..302877 | + | 756 | WP_001314074.1 | hypothetical protein | - |
| RG41_RS01480 () | 303040..303351 | + | 312 | WP_000547563.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| RG41_RS01485 () | 303348..303767 | + | 420 | WP_000126304.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| RG41_RS01490 () | 303859..304287 | - | 429 | WP_000536066.1 | DUF4259 domain-containing protein | - |
| RG41_RS01500 () | 304672..305199 | + | 528 | WP_001078777.1 | electron transport protein HydN | - |
| RG41_RS01505 () | 305352..307604 | + | 2253 | WP_001535518.1 | carbamoyltransferase HypF | - |
| RG41_RS01510 () | 307828..308961 | - | 1134 | WP_000064713.1 | NADH:flavorubredoxin reductase NorW | - |
| RG41_RS01515 () | 308958..310397 | - | 1440 | WP_000029647.1 | anaerobic nitric oxide reductase flavorubredoxin | - |
| RG41_RS01520 () | 310584..312098 | + | 1515 | WP_000010760.1 | Anaerobic nitric oxide reductase transcription regulator NorR | VF |
| RG41_RS01525 () | 312095..313060 | - | 966 | WP_001287423.1 | hypothetical protein | VF |
| RG41_RS01530 () | 313053..313826 | - | 774 | WP_000804544.1 | glucitol operon DNA-binding transcriptional repressor SrlR | - |
| RG41_RS01535 () | 313893..314252 | - | 360 | WP_001536245.1 | transcriptional regulator GutM | - |
| RG41_RS01540 () | 314358..315137 | - | 780 | WP_001077354.1 | sorbitol-6-phosphate dehydrogenase | - |
| RG41_RS01545 () | 315141..315512 | - | 372 | WP_000216207.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| RG41_RS01550 () | 315523..316482 | - | 960 | WP_001535517.1 | PTS glucitol/sorbitol transporter subunit IIB | - |
| RG41_RS01555 () | 316479..317042 | - | 564 | WP_000573321.1 | PTS glucitol/sorbitol transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|