MGE detailed information
MGE type: IS/Tn MGE length: 276 bp
Accession: NZ_CP010147 Location: 53820..54095 Organism: Escherichia coli strain D5 Replicon: plasmid B
Accession: NZ_CP010147 Location: 53820..54095 Organism: Escherichia coli strain D5 Replicon: plasmid B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG38_RS26275 () | 49784..50386 | - | 603 | WP_000243712.1 | transglycosylase SLT domain-containing protein | - |
| RG38_RS26285 () | 50707..51090 | + | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| RG38_RS26290 () | 51277..51966 | + | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| RG38_RS26295 () | 52065..52460 | + | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| RG38_RS26300 () | 52493..52858 | + | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| RG38_RS26305 () | 52873..53184 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| RG38_RS26310 () | 53206..53382 | + | 177 | Protein_54 | type IV conjugative transfer system protein TraE | - |
| RG38_RS26315 () | 53398..54095 | - | 698 | Protein_55 | IS1-like element IS1A family transposase | - |
| RG38_RS26335 () | 54344..54745 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| RG38_RS27720 () | 54678..54935 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| RG38_RS26345 () | 55028..55681 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| RG38_RS26355 () | 56620..57477 | - | 858 | WP_073511591.1 | incFII family plasmid replication initiator RepA | - |
| RG38_RS26360 () | 57470..57952 | - | 483 | WP_001273588.1 | hypothetical protein | - |
| RG38_RS26365 () | 57945..58019 | - | 75 | WP_001442103.1 | RepA leader peptide Tap | - |
| RG38_RS26375 () | 58251..58508 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| RG38_RS26380 () | 58792..58998 | - | 207 | WP_001351576.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 58985..59046 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 58985..59046 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 58985..59046 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 58985..59046 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|