MGE detailed information
MGE type: Prophage MGE length: 7091 bp
Accession: NZ_CP010145 Location: 807260..814350 Organism: Escherichia coli strain D5 Replicon: chromosome
Accession: NZ_CP010145 Location: 807260..814350 Organism: Escherichia coli strain D5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG38_RS04285 () | 803331..804545 | - | 1215 | WP_001349372.1 | BenE family transporter YdcO | - |
| RG38_RS04290 () | 804598..805134 | + | 537 | WP_000429141.1 | DNA-binding transcriptional regulator SutR | - |
| RG38_RS04295 () | 805207..807168 | + | 1962 | WP_001307191.1 | 23S rRNA 5-hydroxycytidine C2501 synthase | - |
| RG38_RS04300 () | 807260..807490 | - | 231 | WP_000494244.1 | YncJ family protein | - |
| RG38_RS04305 () | 807712..807888 | + | 177 | WP_000813794.1 | type II toxin-antitoxin system mRNA interferase toxin HicA | Toxin Detail |
| RG38_RS04310 () | 807934..808350 | + | 417 | WP_001270286.1 | type II toxin-antitoxin system antitoxin HicB | Antitoxin Detail |
| RG38_RS04315 () | 808429..809850 | + | 1422 | WP_073511501.1 | PLP-dependent aminotransferase family protein | - |
| RG38_RS26710 () | 809844..810541 | - | 698 | Protein_783 | IS1 family transposase | - |
| RG38_RS04340 () | 810597..810965 | - | 369 | Protein_784 | Glucose-6-phosphate 1-dehydrogenase | VF |
| RG38_RS04345 () | 810983..811984 | - | 1002 | Protein_785 | ABC transporter substrate-binding protein | - |
| RG38_RS26720 () | 812042..812739 | + | 698 | Protein_786 | IS1 family transposase | - |
| RG38_RS04370 () | 812755..813408 | + | 654 | Protein_787 | Vitamin B12 import ATP-binding protein BtuD | VF |
| RG38_RS04375 () | 813409..814350 | + | 942 | WP_001251319.1 | ABC transporter permease | - |
| RG38_RS04380 () | 814340..815134 | + | 795 | WP_000555481.1 | ABC transporter permease | - |
| RG38_RS04385 () | 815156..816580 | + | 1425 | WP_001163892.1 | aminobutyraldehyde dehydrogenase | - |
| RG38_RS04390 () | 816677..816772 | - | 96 | WP_001303494.1 | stress response membrane protein YncL | - |
| RG38_RS04400 () | 816967..817140 | + | 174 | WP_000061178.1 | orphan toxin OrtT | - |
| RG38_RS04405 () | 817226..817459 | + | 234 | WP_000018633.1 | YdcY family protein | - |
| RG38_RS04410 () | 817460..817909 | - | 450 | WP_001076535.1 | DMT family transporter | - |
| RG38_RS04415 () | 817906..818424 | - | 519 | WP_001296723.1 | L-methionine sulfoximine/L-methionine sulfone acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|