MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP010145 Location: 3760034..3769385 Organism: Escherichia coli strain D5 Replicon: chromosome
Accession: NZ_CP010145 Location: 3760034..3769385 Organism: Escherichia coli strain D5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG38_RS19690 () | 3756765..3757484 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| RG38_RS19695 () | 3757481..3759112 | - | 1632 | WP_001216461.1 | sensor histidine kinase | - |
| RG38_RS19700 () | 3759293..3759523 | + | 231 | WP_000371698.1 | (4Fe-4S)-binding protein | - |
| RG38_RS19705 () | 3759535..3759807 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| RG38_RS19715 () | 3760034..3760330 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| RG38_RS19720 () | 3760358..3760531 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| RG38_RS19725 () | 3760650..3762167 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| RG38_RS19730 () | 3762404..3763861 | - | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| RG38_RS19735 () | 3763920..3766067 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| RG38_RS19740 () | 3766147..3767481 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| RG38_RS19750 () | 3767847..3769385 | - | 1539 | WP_073511565.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| RG38_RS19765 () | 3770184..3770759 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| RG38_RS19770 () | 3770796..3772493 | - | 1698 | WP_000068978.1 | protein-disulfide reductase DsbD | - |
| RG38_RS19775 () | 3772469..3772807 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| RG38_RS19780 () | 3772923..3774224 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.006 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.006 |