MGE detailed information
MGE type: Prophage MGE length: 48058 bp
Accession: NZ_CP010140 Location: 1930191..1978248 Organism: Escherichia coli strain D3 Replicon: chromosome
Accession: NZ_CP010140 Location: 1930191..1978248 Organism: Escherichia coli strain D3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG36_RS29595 () | 1926180..1926227 | + | 48 | WP_211180494.1 | protein YnaN | - |
| RG36_RS10200 () | 1926241..1927224 | + | 984 | WP_000387395.1 | zinc transporter ZntB | - |
| RG36_RS10210 () | 1927702..1929075 | + | 1374 | WP_000123745.1 | ATP-dependent RNA helicase DbpA | - |
| RG36_RS10215 () | 1929204..1930139 | - | 936 | WP_001157405.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| RG36_RS10220 () | 1930191..1931426 | - | 1236 | WP_000040851.1 | Putative defective protein IntQ ; Integrase | Integrase |
| RG36_RS10225 () | 1931428..1931643 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| RG36_RS10230 () | 1931743..1931931 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| - () | 1931747..1931925 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1931747..1931925 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1931747..1931925 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1931747..1931925 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| RG36_RS10235 () | 1931924..1932118 | - | 195 | WP_042038331.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| RG36_RS10240 () | 1932175..1932984 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| RG36_RS10245 () | 1932977..1935577 | - | 2601 | WP_069354050.1 | exodeoxyribonuclease VIII | - |
| RG36_RS10250 () | 1935679..1935953 | - | 275 | Protein_1824 | hypothetical protein | - |
| RG36_RS10255 () | 1936028..1936198 | - | 171 | WP_001485242.1 | hypothetical protein | - |
| RG36_RS10260 () | 1936198..1936419 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| RG36_RS10270 () | 1936860..1937348 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| RG36_RS10275 () | 1937345..1937500 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| RG36_RS10290 () | 1937907..1938623 | - | 717 | WP_001394126.1 | helix-turn-helix domain-containing protein | - |
| RG36_RS10295 () | 1938673..1938888 | + | 216 | WP_060615121.1 | transcriptional regulator | - |
| RG36_RS10300 () | 1938885..1939310 | + | 426 | WP_000693850.1 | Rha family transcriptional regulator | - |
| RG36_RS10305 () | 1939382..1940452 | + | 1071 | WP_073545275.1 | phage replisome organizer | - |
| RG36_RS10310 () | 1940493..1940915 | + | 423 | WP_069354172.1 | DUF977 family protein | - |
| RG36_RS10315 () | 1941315..1944947 | + | 3633 | WP_001278661.1 | hypothetical protein | - |
| RG36_RS10320 () | 1945595..1945720 | + | 126 | WP_001445775.1 | type I toxin-antitoxin system Hok family toxin | - |
| RG36_RS10325 () | 1945803..1946144 | - | 342 | WP_001445776.1 | DUF1971 domain-containing protein | - |
| RG36_RS10330 () | 1947011..1947610 | + | 600 | WP_000940344.1 | DUF1367 family protein | - |
| RG36_RS10335 () | 1947610..1947900 | + | 291 | WP_000228032.1 | DUF1364 domain-containing protein | - |
| RG36_RS10340 () | 1947897..1948439 | + | 543 | WP_000640106.1 | DUF1133 family protein | - |
| RG36_RS10345 () | 1948661..1949230 | + | 570 | WP_001208722.1 | hypothetical protein | - |
| RG36_RS10350 () | 1949199..1949501 | - | 303 | WP_001328752.1 | hypothetical protein | - |
| RG36_RS10355 () | 1949578..1949919 | + | 342 | WP_000781775.1 | phage holin, lambda family | - |
| RG36_RS10360 () | 1949923..1950399 | + | 477 | WP_001194112.1 | glycoside hydrolase family protein | - |
| RG36_RS28225 () | 1950616..1950801 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| RG36_RS10370 () | 1950998..1952455 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| RG36_RS10380 () | 1952593..1953384 | + | 792 | WP_001291105.1 | ParB/Srx family N-terminal domain-containing protein | - |
| RG36_RS10385 () | 1953377..1954309 | + | 933 | WP_001204028.1 | hypothetical protein | - |
| RG36_RS10390 () | 1954245..1954496 | + | 252 | WP_000613571.1 | hypothetical protein | - |
| RG36_RS10395 () | 1954500..1955594 | + | 1095 | WP_069354180.1 | terminase small subunit | - |
| RG36_RS10400 () | 1955575..1956876 | + | 1302 | WP_000625348.1 | terminase family protein | - |
| RG36_RS10405 () | 1956879..1958285 | + | 1407 | WP_000763702.1 | DUF4055 domain-containing protein | - |
| RG36_RS10410 () | 1958269..1959381 | + | 1113 | WP_001363932.1 | hypothetical protein | - |
| RG36_RS10415 () | 1959486..1960250 | + | 765 | WP_000770042.1 | hypothetical protein | - |
| RG36_RS10420 () | 1960349..1961488 | + | 1140 | WP_000918487.1 | hypothetical protein | - |
| RG36_RS29445 () | 1961531..1961707 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| RG36_RS10425 () | 1961711..1962106 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| RG36_RS10430 () | 1962106..1962489 | + | 384 | WP_000524260.1 | hypothetical protein | - |
| RG36_RS10435 () | 1962490..1962870 | + | 381 | WP_001029819.1 | hypothetical protein | - |
| RG36_RS10440 () | 1962867..1963259 | + | 393 | WP_000673077.1 | hypothetical protein | - |
| RG36_RS10445 () | 1963286..1964248 | + | 963 | WP_069354179.1 | hypothetical protein | - |
| RG36_RS10450 () | 1964399..1964758 | + | 360 | WP_122452218.1 | hypothetical protein | - |
| RG36_RS10455 () | 1965230..1968463 | + | 3234 | WP_073545276.1 | phage tail tape measure protein | - |
| RG36_RS10460 () | 1968456..1968794 | + | 339 | WP_000024051.1 | phage tail protein | - |
| RG36_RS10465 () | 1968794..1969492 | + | 699 | WP_001152428.1 | phage minor tail protein L | - |
| RG36_RS10470 () | 1969498..1970241 | + | 744 | WP_032149348.1 | C40 family peptidase | - |
| RG36_RS10475 () | 1970139..1970786 | + | 648 | WP_032170523.1 | tail assembly protein | - |
| RG36_RS10480 () | 1970847..1974245 | + | 3399 | WP_073545277.1 | host specificity protein J | - |
| RG36_RS10485 () | 1974312..1974911 | + | 600 | WP_052921398.1 | Outer membrane protein X | VF |
| RG36_RS10490 () | 1974976..1978248 | + | 3273 | WP_073545344.1 | prophage tail fiber N-terminal domain-containing protein | - |
| RG36_RS10495 () | 1978300..1978430 | + | 131 | Protein_1870 | tail fiber assembly protein | - |
| RG36_RS10500 () | 1978643..1979500 | - | 858 | WP_000968131.1 | iron/manganese ABC transporter permease subunit SitD | - |
| RG36_RS10505 () | 1979497..1980354 | - | 858 | WP_001101723.1 | iron/manganese ABC transporter permease subunit SitC | - |
| RG36_RS10510 () | 1980351..1981178 | - | 828 | WP_021565963.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| RG36_RS10515 () | 1981178..1982092 | - | 915 | WP_000286867.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
| RG36_RS10520 () | 1982677..1983111 | - | 435 | WP_001295593.1 | universal stress protein UspF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|