MGE detailed information
MGE type: Genomic_island MGE length: 16432 bp
Accession: NZ_CP010137 Location: 4229256..4245687 Organism: Escherichia coli strain D2 Replicon: chromosome
Accession: NZ_CP010137 Location: 4229256..4245687 Organism: Escherichia coli strain D2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG35_RS22150 () | 4225676..4226401 | - | 726 | WP_000066581.1 | type 1 fimbria chaperone FimC | - |
| RG35_RS22155 () | 4226438..4226976 | - | 539 | Protein_3985 | type 1 fimbrial protein | - |
| RG35_RS22160 () | 4227041..4227589 | - | 549 | WP_000695574.1 | type 1 fimbrial major subunit FimA | - |
| RG35_RS22170 () | 4228071..4228667 | - | 597 | WP_000044700.1 | type 1 fimbria switch DNA invertase FimE | - |
| RG35_RS22175 () | 4229145..4229747 | - | 603 | Protein_3988 | Tyrosine recombinase XerC | VF |
| RG35_RS22185 () | 4231201..4231917 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| RG35_RS22190 () | 4231937..4233043 | + | 1107 | WP_001299704.1 | N-acetylneuraminate epimerase | - |
| RG35_RS22195 () | 4233108..4234088 | + | 981 | WP_000991455.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| RG35_RS22205 () | 4234671..4235911 | - | 1241 | Protein_3992 | helicase YjhR | - |
| RG35_RS26665 () | 4236027..4236272 | + | 246 | Protein_3993 | GNAT family N-acetyltransferase | - |
| RG35_RS22215 () | 4236649..4236906 | + | 258 | WP_001054375.1 | hypothetical protein | Toxin Detail |
| RG35_RS22220 () | 4236918..4237463 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| RG35_RS22225 () | 4237519..4238265 | + | 747 | WP_000354252.1 | class I SAM-dependent methyltransferase | - |
| RG35_RS26175 () | 4238434..4238652 | + | 219 | Protein_3997 | hypothetical protein | - |
| RG35_RS27225 () | 4238690..4238806 | + | 117 | Protein_3998 | VOC family protein | - |
| RG35_RS22235 () | 4239051..4240172 | + | 1122 | WP_000010831.1 | M42 family metallopeptidase | - |
| RG35_RS22240 () | 4240169..4240447 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| RG35_RS22245 () | 4240459..4241772 | + | 1314 | WP_000460845.1 | galactitol-specific PTS transporter subunit IIC | - |
| RG35_RS22250 () | 4241785..4242591 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| RG35_RS22255 () | 4242722..4243153 | + | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| RG35_RS22260 () | 4243165..4243797 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| RG35_RS22265 () | 4243814..4244596 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| RG35_RS22270 () | 4244899..4245687 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| RG35_RS22275 () | 4245692..4246597 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| RG35_RS22280 () | 4246608..4248575 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| RG35_RS22285 () | 4248682..4250031 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|