MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 56460 bp
Accession: NZ_CP010131 Location: 1..56460 Organism: Escherichia coli strain C9 Replicon: plasmid B
Accession: NZ_CP010131 Location: 1..56460 Organism: Escherichia coli strain C9 Replicon: plasmid B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG31_RS24910 () | 5..757 | + | 753 | Protein_0 | terminase | - |
| RG31_RS24915 () | 785..1822 | - | 1038 | WP_048659773.1 | hypothetical protein | - |
| RG31_RS24920 () | 2220..3248 | + | 1029 | WP_048659775.1 | tyrosine-type recombinase/integrase | - |
| RG31_RS24925 () | 3321..3665 | + | 345 | WP_004010537.1 | hypothetical protein | - |
| RG31_RS24930 () | 3662..4153 | + | 492 | WP_004010538.1 | hypothetical protein | - |
| RG31_RS24935 () | 4146..4640 | + | 495 | WP_048659776.1 | dUTP diphosphatase | - |
| RG31_RS24940 () | 4654..5454 | + | 801 | WP_001743161.1 | hypothetical protein | - |
| RG31_RS24945 () | 5538..5918 | - | 381 | WP_024166788.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| RG31_RS24950 () | 5918..6139 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| RG31_RS24955 () | 6212..6604 | - | 393 | WP_000506718.1 | hypothetical protein | - |
| RG31_RS24960 () | 6716..6964 | - | 249 | WP_001286530.1 | DNA polymerase III subunit theta | - |
| RG31_RS24965 () | 6967..7167 | - | 201 | WP_001408980.1 | hypothetical protein | - |
| RG31_RS24970 () | 7303..7542 | - | 240 | Protein_12 | hypothetical protein | - |
| RG31_RS24975 () | 7590..7787 | - | 198 | WP_048659784.1 | DUF4752 family protein | - |
| RG31_RS24980 () | 7746..8411 | + | 666 | Protein_14 | IS5 family transposase IS903B | Transposase |
| RG31_RS24985 () | 8519..8707 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| RG31_RS24990 () | 8717..9916 | + | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| RG31_RS24995 () | 10089..10262 | + | 174 | Protein_17 | ATP-dependent helicase | - |
| RG31_RS25000 () | 10265..10543 | + | 279 | WP_001711179.1 | hypothetical protein | - |
| RG31_RS25005 () | 10603..11025 | + | 423 | WP_024172705.1 | hypothetical protein | - |
| RG31_RS25010 () | 11030..11194 | + | 165 | Protein_20 | transcriptional regulator | - |
| RG31_RS25015 () | 11201..12058 | - | 858 | Protein_21 | IS3 family transposase ISCfr6 | Transposase |
| RG31_RS25020 () | 12127..13107 | + | 981 | WP_032216024.1 | IS5 family transposase ISKpn26 | Transposase |
| RG31_RS25030 () | 13388..13780 | + | 393 | WP_001281116.1 | hypothetical protein | - |
| RG31_RS25035 () | 14098..14958 | + | 861 | WP_021546926.1 | replication protein RepA | - |
| RG31_RS25040 () | 15358..16563 | + | 1206 | WP_000817632.1 | Plasmid partition protein A | VF |
| RG31_RS25045 () | 16560..17525 | + | 966 | WP_000725192.1 | ParB/RepB/Spo0J family partition protein | - |
| RG31_RS25050 () | 17790..18830 | + | 1041 | Protein_27 | hypothetical protein | - |
| RG31_RS25060 () | 19001..20200 | - | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| RG31_RS25065 () | 20210..20398 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| RG31_RS25070 () | 20515..21159 | + | 645 | Protein_30 | group II intron reverse transcriptase/maturase | - |
| RG31_RS25075 () | 21158..22082 | + | 925 | Protein_31 | IS5 family transposase IS903 | Transposase |
| RG31_RS25080 () | 22139..22519 | + | 381 | Protein_32 | ISAs1 family transposase IS1358A | Transposase |
| RG31_RS25085 () | 23069..23473 | - | 405 | Protein_33 | IS5 family transposase IS5D | Transposase |
| RG31_RS25090 () | 23649..24788 | + | 1140 | WP_073511204.1 | ISAs1 family transposase IS1358 | Transposase |
| RG31_RS25095 () | 24927..25475 | + | 549 | WP_045898906.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | VF |
| RG31_RS25100 () | 25700..26977 | + | 1278 | WP_073511205.1 | flippase | - |
| RG31_RS25105 () | 27067..27485 | + | 419 | Protein_37 | transposase | - |
| RG31_RS25110 () | 28290..29543 | + | 1254 | WP_073511206.1 | O-antigen ligase family protein | - |
| RG31_RS25115 () | 29599..30303 | + | 705 | WP_073511207.1 | hypothetical protein | - |
| RG31_RS25120 () | 30467..31345 | + | 879 | WP_165587248.1 | glycosyltransferase | - |
| RG31_RS25125 () | 31480..32037 | + | 558 | Protein_41 | IS5 family transposase ISKpn26 | Transposase |
| RG31_RS25130 () | 32207..33346 | + | 1140 | WP_073511204.1 | ISAs1 family transposase IS1358 | Transposase |
| RG31_RS25135 () | 33354..33794 | + | 441 | Protein_43 | IS5 family transposase ISKpn26 | Transposase |
| RG31_RS25140 () | 33960..35012 | + | 1053 | WP_073511210.1 | DUF1972 domain-containing protein | - |
| RG31_RS25150 () | 35386..36525 | + | 1140 | WP_073511204.1 | ISAs1 family transposase IS1358 | Transposase |
| RG31_RS25155 () | 36533..37436 | + | 904 | Protein_46 | IS5 family transposase IS903 | Transposase |
| RG31_RS25160 () | 37493..37873 | + | 381 | Protein_47 | ISAs1 family transposase IS1358A | Transposase |
| RG31_RS26620 () | 38423..38827 | - | 405 | Protein_48 | ISAs1 family transposase ISPpr12 | Transposase |
| RG31_RS26625 () | 38828..39592 | - | 765 | Protein_49 | ISAs1 family transposase ISPpr12 | Transposase |
| RG31_RS25180 () | 40989..42740 | - | 1752 | Protein_51 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| RG31_RS25185 () | 42729..43136 | + | 408 | WP_001214976.1 | cysteine hydrolase | - |
| RG31_RS25190 () | 43274..44158 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| RG31_RS25195 () | 44190..45389 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| RG31_RS25200 () | 45495..46130 | + | 636 | WP_039045916.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| RG31_RS25205 () | 46162..46380 | - | 219 | WP_073511214.1 | relaxase | - |
| RG31_RS25210 () | 46416..47120 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| RG31_RS25215 () | 47227..47817 | + | 591 | WP_012477564.1 | plasmid pRiA4b ORF-3 family protein | - |
| RG31_RS25220 () | 47954..48526 | + | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| RG31_RS25225 () | 48563..49954 | + | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| RG31_RS25230 () | 49987..50415 | + | 429 | Protein_61 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| RG31_RS25235 () | 50734..51390 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| RG31_RS25245 () | 51785..52800 | + | 1016 | Protein_63 | IS3 family transposase ISEc36 | Transposase |
| RG31_RS25250 () | 52843..55641 | - | 2799 | Protein_64 | Tn3 family transposase TnpA_Tn3 | Transposase |
| RG31_RS25255 () | 55695..56399 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|