MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 42655 bp
Accession: NZ_CP010127 Location: 1..42655 Organism: Escherichia coli strain C8 Replicon: plasmid B
Accession: NZ_CP010127 Location: 1..42655 Organism: Escherichia coli strain C8 Replicon: plasmid B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG30_RS26275 () | 945..1703 | + | 759 | WP_073534362.1 | pilus assembly protein | - |
| RG30_RS26280 () | 1704..1931 | + | 228 | WP_000835348.1 | EexN family lipoprotein | - |
| RG30_RS26285 () | 1941..3074 | + | 1134 | WP_073534363.1 | type IV secretion system protein | - |
| RG30_RS26290 () | 3321..4034 | + | 714 | WP_001694634.1 | type IV secretion system protein | - |
| RG30_RS26295 () | 4039..4968 | + | 930 | WP_000783372.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| RG30_RS26300 () | 4965..6170 | + | 1206 | WP_073534364.1 | Type IV secretion system protein virB10 | VF |
| RG30_RS26305 () | 6172..7203 | + | 1032 | WP_073534365.1 | Type IV secretion system protein VirB11 | VF |
| RG30_RS26310 () | 7206..9041 | + | 1836 | WP_000053829.1 | type IV secretory system conjugative DNA transfer family protein | - |
| RG30_RS26315 () | 9038..9451 | + | 414 | WP_073534366.1 | conjugal transfer protein | - |
| RG30_RS26320 () | 9448..9750 | + | 303 | WP_073534367.1 | conjugal transfer protein | - |
| RG30_RS26325 () | 9837..11990 | + | 2154 | WP_073534368.1 | type IA DNA topoisomerase | - |
| RG30_RS26330 () | 11987..12193 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| RG30_RS26335 () | 12209..12673 | + | 465 | WP_073534369.1 | H-NS histone family protein | - |
| RG30_RS26340 () | 12749..13135 | + | 387 | WP_000273881.1 | hypothetical protein | - |
| RG30_RS27775 () | 13428..13881 | + | 454 | Protein_15 | hypothetical protein | - |
| RG30_RS26350 () | 14379..15431 | + | 1053 | WP_012262109.1 | ThiF family adenylyltransferase | - |
| RG30_RS26355 () | 15428..16642 | + | 1215 | WP_077899829.1 | MFS transporter | - |
| RG30_RS26360 () | 16639..17442 | + | 804 | WP_000152799.1 | class I SAM-dependent methyltransferase | - |
| RG30_RS26365 () | 17427..19196 | + | 1770 | WP_073534370.1 | GNAT family N-acetyltransferase | - |
| RG30_RS26370 () | 19253..20287 | - | 1035 | WP_012262113.1 | LD-carboxypeptidase | - |
| - () | 20689..20721 | - | 33 | NuclAT_0 | - | - |
| - () | 20689..20721 | - | 33 | NuclAT_0 | - | - |
| - () | 20689..20721 | - | 33 | NuclAT_0 | - | - |
| - () | 20689..20721 | - | 33 | NuclAT_0 | - | - |
| RG30_RS26380 () | 22282..22458 | - | 177 | WP_073534371.1 | lasso peptide microcin J25 | - |
| RG30_RS26385 () | 22799..23425 | + | 627 | WP_001513515.1 | lasso peptide biosynthesis B2 protein | - |
| RG30_RS26390 () | 23428..24969 | + | 1542 | WP_073534372.1 | lasso peptide isopeptide bond-forming cyclase | - |
| RG30_RS26395 () | 24972..26714 | + | 1743 | WP_001513513.1 | ABC transporter ATP-binding protein | - |
| RG30_RS26400 () | 27039..27683 | - | 645 | WP_073534373.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| RG30_RS26405 () | 27979..28599 | + | 621 | WP_000864791.1 | ParA family protein | - |
| RG30_RS26410 () | 28651..28881 | + | 231 | WP_000051063.1 | partitioning protein | - |
| RG30_RS27780 () | 28897..29208 | + | 312 | WP_001423339.1 | hypothetical protein | - |
| RG30_RS27785 () | 29643..29828 | + | 186 | Protein_29 | YcxB family protein | - |
| RG30_RS26435 () | 30004..30237 | + | 234 | WP_073534387.1 | YcxB family protein | - |
| RG30_RS26440 () | 30255..31115 | + | 861 | WP_073534376.1 | hypothetical protein | - |
| RG30_RS26445 () | 31137..31562 | - | 426 | WP_149026027.1 | DNA distortion polypeptide 3 | - |
| RG30_RS26450 () | 31630..32076 | - | 447 | WP_073534377.1 | hypothetical protein | - |
| RG30_RS26455 () | 32116..32952 | - | 837 | WP_001802123.1 | replication initiation protein | - |
| RG30_RS26465 () | 34185..34436 | + | 252 | WP_073534378.1 | plasmid stabilization protein | Antitoxin Detail |
| RG30_RS26470 () | 34426..34707 | + | 282 | WP_073534379.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| RG30_RS26475 () | 34853..35176 | + | 324 | WP_001181903.1 | hypothetical protein | - |
| RG30_RS26480 () | 35221..35466 | + | 246 | WP_001550454.1 | hypothetical protein | - |
| RG30_RS26485 () | 35456..35671 | + | 216 | WP_001180116.1 | hypothetical protein | - |
| RG30_RS27550 () | 35764..36092 | + | 329 | Protein_40 | hypothetical protein | - |
| RG30_RS27790 () | 36135..36305 | + | 171 | WP_182487779.1 | hypothetical protein | - |
| RG30_RS27795 () | 36383..36532 | + | 150 | WP_175154170.1 | hypothetical protein | - |
| RG30_RS26495 () | 36545..36817 | + | 273 | WP_000167280.1 | hypothetical protein | - |
| RG30_RS26500 () | 37133..37678 | + | 546 | WP_073534381.1 | DNA distortion polypeptide 1 | - |
| RG30_RS26505 () | 37681..38847 | + | 1167 | WP_073534382.1 | hypothetical protein | Relaxase |
| RG30_RS26510 () | 39200..39685 | + | 486 | WP_073534383.1 | transcription termination factor NusG | - |
| RG30_RS26515 () | 39648..39860 | + | 213 | WP_000125172.1 | hypothetical protein | - |
| RG30_RS26520 () | 39893..40540 | + | 648 | WP_073534384.1 | Type IV secretion system protein virB1 | VF |
| RG30_RS26525 () | 40518..40814 | + | 297 | WP_073534385.1 | TrbC/VirB2 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|