MGE detailed information
MGE type: Prophage MGE length: 55404 bp
Accession: NZ_CP010125 Location: 1936264..1991667 Organism: Escherichia coli strain C8 Replicon: chromosome
Accession: NZ_CP010125 Location: 1936264..1991667 Organism: Escherichia coli strain C8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG30_RS10030 () | 1931770..1933296 | - | 1527 | WP_000062967.1 | p-aminobenzoyl-glutamate transporter | - |
| RG30_RS10040 () | 1933333..1934778 | - | 1446 | WP_073533602.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| RG30_RS10045 () | 1934778..1936088 | - | 1311 | WP_000444949.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| RG30_RS10050 () | 1936264..1937172 | + | 909 | WP_000885467.1 | LysR family transcriptional regulator | - |
| RG30_RS10055 () | 1937502..1938065 | + | 564 | WP_001046821.1 | DNA endonuclease SmrA | - |
| RG30_RS10060 () | 1938086..1939318 | - | 1233 | WP_001307164.1 | diguanylate cyclase DgcM | - |
| RG30_RS27835 () | 1939512..1939559 | + | 48 | WP_211180494.1 | protein YnaN | - |
| RG30_RS10065 () | 1939573..1940556 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| RG30_RS27630 () | 1940831..1941004 | + | 174 | WP_001296046.1 | hypothetical protein | - |
| RG30_RS10075 () | 1941034..1942407 | + | 1374 | WP_073533604.1 | ATP-dependent RNA helicase DbpA | - |
| RG30_RS10080 () | 1942536..1943471 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| RG30_RS10085 () | 1943523..1944758 | - | 1236 | WP_000040852.1 | Putative defective protein IntQ ; Integrase | Integrase |
| RG30_RS10090 () | 1944760..1944975 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| RG30_RS10095 () | 1945054..1945263 | - | 210 | WP_021565074.1 | double-strand break reduction protein RcbA | - |
| - () | 1945079..1945257 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1945079..1945257 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1945079..1945257 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1945079..1945257 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| RG30_RS10100 () | 1945256..1945450 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| RG30_RS10105 () | 1945507..1946316 | - | 810 | WP_073533605.1 | recombination protein RecT | - |
| RG30_RS10110 () | 1946309..1948908 | - | 2600 | Protein_1826 | exodeoxyribonuclease VIII | - |
| RG30_RS10115 () | 1949010..1949285 | - | 276 | WP_000632297.1 | protein RacC | - |
| RG30_RS10120 () | 1949360..1949530 | - | 171 | WP_077899810.1 | hypothetical protein | - |
| RG30_RS10125 () | 1949530..1949751 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| RG30_RS10135 () | 1950193..1950681 | + | 489 | WP_001324055.1 | superinfection exclusion B family protein | - |
| RG30_RS10140 () | 1950678..1950833 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| RG30_RS10145 () | 1950844..1951023 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| RG30_RS10155 () | 1951266..1951685 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| RG30_RS10160 () | 1951765..1952019 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| RG30_RS10165 () | 1952016..1952438 | + | 423 | WP_000693803.1 | hypothetical protein | - |
| RG30_RS10170 () | 1952516..1953304 | + | 789 | WP_001396581.1 | hypothetical protein | - |
| RG30_RS10175 () | 1953311..1954057 | + | 747 | WP_000788970.1 | ATP-binding protein | - |
| RG30_RS10180 () | 1954080..1954802 | + | 723 | WP_073533608.1 | DUF1627 domain-containing protein | - |
| RG30_RS10185 () | 1954857..1955261 | + | 405 | WP_040091718.1 | DUF977 family protein | - |
| RG30_RS10190 () | 1955361..1957809 | - | 2449 | Protein_1840 | hypothetical protein | - |
| RG30_RS10195 () | 1958488..1959087 | + | 600 | WP_073533610.1 | DUF1367 family protein | - |
| RG30_RS10200 () | 1959087..1959377 | + | 291 | WP_073533612.1 | DUF1364 domain-containing protein | - |
| RG30_RS10205 () | 1959374..1959916 | + | 543 | WP_073533613.1 | DUF1133 family protein | - |
| RG30_RS10210 () | 1961195..1961425 | + | 231 | WP_001314667.1 | hypothetical protein | - |
| RG30_RS10215 () | 1961422..1961934 | - | 513 | WP_073533614.1 | hypothetical protein | - |
| RG30_RS10220 () | 1962151..1962366 | + | 216 | WP_000839585.1 | class II holin family protein | - |
| RG30_RS10225 () | 1962371..1962715 | + | 345 | WP_073533616.1 | YdfR family protein | - |
| RG30_RS10230 () | 1962681..1962953 | - | 273 | WP_001390122.1 | hypothetical protein | - |
| RG30_RS10235 () | 1963059..1963592 | + | 534 | WP_073533617.1 | lysozyme | - |
| RG30_RS26770 () | 1963809..1963994 | + | 186 | WP_077899786.1 | Rz1 family lipoprotein | - |
| RG30_RS10245 () | 1964191..1965648 | + | 1458 | WP_073533620.1 | Trk system potassium transporter TrkG | - |
| RG30_RS10255 () | 1965786..1966574 | + | 789 | WP_001614533.1 | ParB/Srx family N-terminal domain-containing protein | - |
| RG30_RS10260 () | 1966567..1967499 | + | 933 | WP_073533622.1 | hypothetical protein | - |
| RG30_RS10265 () | 1967435..1967686 | + | 252 | WP_000613571.1 | hypothetical protein | - |
| RG30_RS10270 () | 1967690..1968784 | + | 1095 | WP_073533624.1 | terminase small subunit | - |
| RG30_RS10275 () | 1968765..1970066 | + | 1302 | WP_000625347.1 | terminase family protein | - |
| RG30_RS10280 () | 1970069..1971475 | + | 1407 | WP_000763709.1 | DUF4055 domain-containing protein | - |
| RG30_RS10285 () | 1971459..1972571 | + | 1113 | WP_073533626.1 | hypothetical protein | - |
| RG30_RS10290 () | 1972676..1973440 | + | 765 | WP_000770037.1 | hypothetical protein | - |
| RG30_RS10295 () | 1973539..1974678 | + | 1140 | WP_000918487.1 | hypothetical protein | - |
| RG30_RS27635 () | 1974721..1974897 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| RG30_RS10300 () | 1974901..1975296 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| RG30_RS10305 () | 1975296..1975679 | + | 384 | WP_000524260.1 | hypothetical protein | - |
| RG30_RS10310 () | 1975680..1976060 | + | 381 | WP_073533628.1 | hypothetical protein | - |
| RG30_RS10315 () | 1976057..1976449 | + | 393 | WP_000673077.1 | hypothetical protein | - |
| RG30_RS10320 () | 1976476..1977438 | + | 963 | WP_073533630.1 | hypothetical protein | - |
| RG30_RS10325 () | 1977589..1977948 | + | 360 | WP_012565075.1 | hypothetical protein | - |
| RG30_RS10335 () | 1978422..1981655 | + | 3234 | WP_073533632.1 | phage tail tape measure protein | - |
| RG30_RS10340 () | 1981648..1981986 | + | 339 | WP_000024051.1 | phage tail protein | - |
| RG30_RS10345 () | 1981986..1982684 | + | 699 | WP_001774438.1 | phage minor tail protein L | - |
| RG30_RS10350 () | 1982690..1983433 | + | 744 | WP_073533634.1 | C40 family peptidase | - |
| RG30_RS10355 () | 1983331..1983978 | + | 648 | WP_073533636.1 | tail assembly protein | - |
| RG30_RS10360 () | 1984039..1987437 | + | 3399 | WP_073533637.1 | host specificity protein J | - |
| RG30_RS10365 () | 1987504..1988103 | + | 600 | WP_073533644.1 | Outer membrane protein X | VF |
| RG30_RS10370 () | 1988168..1991083 | + | 2916 | WP_073534247.1 | phage tail protein | - |
| RG30_RS10375 () | 1991083..1991667 | + | 585 | WP_073507386.1 | tail fiber assembly protein | - |
| RG30_RS10380 () | 1991880..1992737 | - | 858 | WP_073533645.1 | iron/manganese ABC transporter permease subunit SitD | - |
| RG30_RS10385 () | 1992734..1993591 | - | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| RG30_RS10390 () | 1993588..1994415 | - | 828 | WP_073533648.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| RG30_RS10395 () | 1994415..1995329 | - | 915 | WP_073507384.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
| RG30_RS10400 () | 1995913..1996347 | - | 435 | WP_001082294.1 | universal stress protein UspF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|