MGE detailed information
MGE type: Genomic_island MGE length: 15112 bp
Accession: NZ_CP010122 Location: 4418273..4433384 Organism: Escherichia coli strain C5 Replicon: chromosome
Accession: NZ_CP010122 Location: 4418273..4433384 Organism: Escherichia coli strain C5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG28_RS23530 () | 4414326..4415270 | + | 945 | WP_000947068.1 | nickel ABC transporter permease subunit NikB | - |
| RG28_RS23535 () | 4415267..4416100 | + | 834 | WP_001008963.1 | nickel ABC transporter permease subunit NikC | - |
| RG28_RS23540 () | 4416100..4416864 | + | 765 | WP_001136236.1 | nickel import ATP-binding protein NikD | - |
| RG28_RS23545 () | 4416861..4417667 | + | 807 | WP_021565456.1 | nickel import ATP-binding protein NikE | - |
| RG28_RS23550 () | 4417673..4418074 | + | 402 | WP_001190062.1 | nickel-responsive transcriptional regulator NikR | - |
| RG28_RS23555 () | 4418273..4419019 | + | 747 | WP_001308115.1 | GntR family transcriptional regulator | - |
| RG28_RS23560 () | 4419044..4419517 | + | 474 | WP_001161650.1 | PTS sugar transporter subunit IIA | - |
| RG28_RS23565 () | 4419514..4419795 | + | 282 | WP_000084025.1 | PTS sugar transporter subunit IIB | - |
| RG28_RS23570 () | 4419872..4421230 | + | 1359 | WP_021565455.1 | PTS galactitol transporter subunit IIC | - |
| RG28_RS23575 () | 4421223..4422731 | + | 1509 | WP_021565454.1 | xylulose kinase | - |
| RG28_RS23580 () | 4422721..4422990 | + | 270 | WP_000933061.1 | HPr family phosphocarrier protein | - |
| RG28_RS23585 () | 4423022..4423882 | + | 861 | WP_001131788.1 | class II aldolase | - |
| RG28_RS23590 () | 4423932..4424291 | - | 360 | WP_000593555.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| RG28_RS23595 () | 4424288..4424563 | - | 276 | WP_001259385.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| RG28_RS23600 () | 4424622..4425746 | - | 1125 | WP_021565453.1 | ABC transporter permease | - |
| RG28_RS23605 () | 4425746..4428481 | - | 2736 | WP_073521150.1 | Ribosome-associated ATPase | VF |
| RG28_RS23610 () | 4428478..4429545 | - | 1068 | WP_021565451.1 | HlyD family secretion protein | - |
| RG28_RS32165 () | 4429608..4429721 | - | 114 | WP_001315057.1 | protein YhiY | - |
| RG28_RS23615 () | 4429911..4431533 | - | 1623 | WP_021565450.1 | DUF4049 domain-containing protein | - |
| RG28_RS23620 () | 4431795..4433384 | - | 1590 | WP_021565449.1 | DUF4049 domain-containing protein | - |
| RG28_RS23635 () | 4433767..4434819 | + | 1053 | WP_001461685.1 | DUF2776 domain-containing protein | - |
| RG28_RS23640 () | 4435136..4436338 | - | 1203 | WP_000439188.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| RG28_RS23645 () | 4436570..4438069 | + | 1500 | WP_000902780.1 | inorganic phosphate transporter PitA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|